FFCP PHASE1:Mm9::chr4:11685321..11685367,+: Difference between revisions
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{{FFCP|EntrezGene=12557|HGNC=|MCL_coexpression_id=12|UniProt=A2AKS7|association_with_transcript=0bp_to_ENSMUST00000108303_5end|description=CAGE_peak_1_at_Cdh17_5end|id=chr4:11685321..11685367,+|ontology_enrichment_celltype=CL:0002563!4.05e-07!9;CL:0002251!4.05e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,8.79e-09,9;CL:0002251,8.79e-09,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.21e-22!59;UBERON:0000160!1.71e-19!43;UBERON:0001007!4.49e-15!128;UBERON:0001555!4.49e-15!128;UBERON:0007026!4.49e-15!128;UBERON:0004119!2.36e-14!130;UBERON:0000925!2.36e-14!130;UBERON:0006595!2.36e-14!130;UBERON:0004921!7.53e-14!126;UBERON:0004185!7.53e-14!126;UBERON:0000344!5.86e-12!15;UBERON:0001242!2.31e-10!13;UBERON:0000060!2.31e-10!13;UBERON:0001262!2.31e-10!13;UBERON:0004786!2.31e-10!13;UBERON:0004923!4.52e-09!24;UBERON:0003350!4.05e-07!9;UBERON:0004808!4.05e-07!9;UBERON:0001277!4.05e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.35e-29,31;UBERON:0005409,1.88e-26,47;UBERON:0000344,4.67e-15,15;UBERON:0001242,5.51e-13,13;UBERON:0001262,5.51e-13,13;UBERON:0004786,5.51e-13,13;UBERON:0001007,7.44e-10,116;UBERON:0001555,7.44e-10,116;UBERON:0007026,7.44e-10,116;UBERON:0004119,2.07e-09,118;UBERON:0000925,2.07e-09,118;UBERON:0006595,2.07e-09,118;UBERON:0004923,4.71e-09,24;UBERON:0003350,8.79e-09,9;UBERON:0004808,8.79e-09,9;UBERON:0001277,8.79e-09,9;UBERON:0004921,1.02e-08,114|phase1_expression=0,686.783602234263,505.959154201164,576.496786750818,546.477241371465,297.482069827869,432.183385101722,0,0,0,0,0,0,0,0.333109761815663,2.02475267389826,0,7.5710919685977,10.8320402548534,2.54633791078818,0.0850432901510698,2.08510997521859,2.87319768052829,1245.86099629226,1187.42243880367,662.089454624618,628.050990399931,683.259278846954,1683.98754322239,1364.74315265002,1056.76761378318,0,0,0,210.283979178928,253.009130235625,215.194501500537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.85899993932794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,70.9244321665347,0,0,0,0,0,0,0,0,0.253359865475099,0,214.665693871833,2.33044095282455,0,0,0,0,0.150722640552623,0.23517741427141,1.75933227861546,0,0.578397427679647,0,0.323533699894818,0,0,795.892820401382,0,0,1329.39851530551,0,0,0,0,0,0,0,0.255715457330331,0,0,0.101839363850316,3.73220911830279,4.54900965180614,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0.219550115291051,0,0,0,2903.38984607863,1305.32799705125,6.18535926552179,28.7973473106944,205.02813096345,438.863349580393,519.919866509307,649.049836296052,1054.87810381345,802.742705324829,511.467149908548,577.968551279543,539.465629058605,1030.04704231774,987.534749877478,1035.53462092271,0,0.342745537829186,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0,0,0.296452627087149,0.500535317148282,0.589676985339609,0.449724224769707,0.405720242777006,0.72353147925725,2.29163266603278,0,0.324270453550071,0,0,0.372140947668503,0.312037673114561,0,0.358794827043824,0,0.369506380333209,0,0.488894929326078,2.37643120085263,0,0,0.238043640886014,0,0.315270288212382,0.221464689648775,0,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0.971122544619926,4.23252979750651,0.377210159511796,0,0.307435147943927,119.13544315055,0,0.356497378384721,0.316036757935816,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.49465875882444,0.161464426695906,0,0,1.64140899745061,974.420436853591,0,3.07567585436135,0.206386867963223,0.185194527369712,1.50694765603753,0.546776910884101,0.915112692826091,0.169978429993855,0,0.414599921413271,0.954670618015114,0.158167996790568,8.94605655358134,53.1386276843262,12.7543860568826,48.4764891516514,1.61837215661785,5.20716771069616,0,788.70711248056,0,0,0.448549638131936,0,0,0,0,0,0,0,0,0.288030006257865,2.52808896502543,2.43270258348197,0.924398614483445,0.649604114888975,1.43221356533985,1.78813219303138,1.56254084375959,2.21534290761866,1.81739609906666,1.5241361331,2.21817607301049,4.87289403698762,2.5977197242889,2.57129184799452,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.07766792670735,1.46729213839588,4.96377472815038,28.6698278864084,27.4026626127729,34.0174362167324,29.3128765646005,33.7127468854019,34.8958731564241,28.654301285784,30.1558467826934,26.0182674368928,30.9590899333998,22.8292122111365,24.8852894398179,25.1372399490017,29.4397840268795,32.229709724229,26.4438951177413,24.3204913746267,29.5053225763627,26.9152827987846,25.892070014853,23.9635644463332,24.9916225865951,27.4324309968641,23.0068331379673,24.2015436973315,25.0201385233931,18.8246279858057,26.1843261604283,24.3062329836238,0.249810577937946,37.8969205681562,50.2798266473018,2.10417165275728,0.882365676478062,1.39120701372253|short_description=p1@Cdh17}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12557 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2AKS7 | |||
|association_with_transcript=0bp_to_ENSMUST00000108303_5end | |||
|cluster_id=chr4:11685321..11685367,+ | |||
|description=CAGE_peak_1_at_Cdh17_5end | |||
|id=chr4:11685321..11685367,+ | |||
|ontology_enrichment_celltype=CL:0002563!4.05e-07!9;CL:0002251!4.05e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,8.79e-09,9;CL:0002251,8.79e-09,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.21e-22!59;UBERON:0000160!1.71e-19!43;UBERON:0001007!4.49e-15!128;UBERON:0001555!4.49e-15!128;UBERON:0007026!4.49e-15!128;UBERON:0004119!2.36e-14!130;UBERON:0000925!2.36e-14!130;UBERON:0006595!2.36e-14!130;UBERON:0004921!7.53e-14!126;UBERON:0004185!7.53e-14!126;UBERON:0000344!5.86e-12!15;UBERON:0001242!2.31e-10!13;UBERON:0000060!2.31e-10!13;UBERON:0001262!2.31e-10!13;UBERON:0004786!2.31e-10!13;UBERON:0004923!4.52e-09!24;UBERON:0003350!4.05e-07!9;UBERON:0004808!4.05e-07!9;UBERON:0001277!4.05e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.35e-29,31;UBERON:0005409,1.88e-26,47;UBERON:0000344,4.67e-15,15;UBERON:0001242,5.51e-13,13;UBERON:0001262,5.51e-13,13;UBERON:0004786,5.51e-13,13;UBERON:0001007,7.44e-10,116;UBERON:0001555,7.44e-10,116;UBERON:0007026,7.44e-10,116;UBERON:0004119,2.07e-09,118;UBERON:0000925,2.07e-09,118;UBERON:0006595,2.07e-09,118;UBERON:0004923,4.71e-09,24;UBERON:0003350,8.79e-09,9;UBERON:0004808,8.79e-09,9;UBERON:0001277,8.79e-09,9;UBERON:0004921,1.02e-08,114 | |||
|phase1_expression=0,686.783602234263,505.959154201164,576.496786750818,546.477241371465,297.482069827869,432.183385101722,0,0,0,0,0,0,0,0.333109761815663,2.02475267389826,0,7.5710919685977,10.8320402548534,2.54633791078818,0.0850432901510698,2.08510997521859,2.87319768052829,1245.86099629226,1187.42243880367,662.089454624618,628.050990399931,683.259278846954,1683.98754322239,1364.74315265002,1056.76761378318,0,0,0,210.283979178928,253.009130235625,215.194501500537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.85899993932794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,70.9244321665347,0,0,0,0,0,0,0,0,0.253359865475099,0,214.665693871833,2.33044095282455,0,0,0,0,0.150722640552623,0.23517741427141,1.75933227861546,0,0.578397427679647,0,0.323533699894818,0,0,795.892820401382,0,0,1329.39851530551,0,0,0,0,0,0,0,0.255715457330331,0,0,0.101839363850316,3.73220911830279,4.54900965180614,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0.219550115291051,0,0,0,2903.38984607863,1305.32799705125,6.18535926552179,28.7973473106944,205.02813096345,438.863349580393,519.919866509307,649.049836296052,1054.87810381345,802.742705324829,511.467149908548,577.968551279543,539.465629058605,1030.04704231774,987.534749877478,1035.53462092271,0,0.342745537829186,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0,0,0.296452627087149,0.500535317148282,0.589676985339609,0.449724224769707,0.405720242777006,0.72353147925725,2.29163266603278,0,0.324270453550071,0,0,0.372140947668503,0.312037673114561,0,0.358794827043824,0,0.369506380333209,0,0.488894929326078,2.37643120085263,0,0,0.238043640886014,0,0.315270288212382,0.221464689648775,0,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0.971122544619926,4.23252979750651,0.377210159511796,0,0.307435147943927,119.13544315055,0,0.356497378384721,0.316036757935816,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.49465875882444,0.161464426695906,0,0,1.64140899745061,974.420436853591,0,3.07567585436135,0.206386867963223,0.185194527369712,1.50694765603753,0.546776910884101,0.915112692826091,0.169978429993855,0,0.414599921413271,0.954670618015114,0.158167996790568,8.94605655358134,53.1386276843262,12.7543860568826,48.4764891516514,1.61837215661785,5.20716771069616,0,788.70711248056,0,0,0.448549638131936,0,0,0,0,0,0,0,0,0.288030006257865,2.52808896502543,2.43270258348197,0.924398614483445,0.649604114888975,1.43221356533985,1.78813219303138,1.56254084375959,2.21534290761866,1.81739609906666,1.5241361331,2.21817607301049,4.87289403698762,2.5977197242889,2.57129184799452,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.07766792670735,1.46729213839588,4.96377472815038,28.6698278864084,27.4026626127729,34.0174362167324,29.3128765646005,33.7127468854019,34.8958731564241,28.654301285784,30.1558467826934,26.0182674368928,30.9590899333998,22.8292122111365,24.8852894398179,25.1372399490017,29.4397840268795,32.229709724229,26.4438951177413,24.3204913746267,29.5053225763627,26.9152827987846,25.892070014853,23.9635644463332,24.9916225865951,27.4324309968641,23.0068331379673,24.2015436973315,25.0201385233931,18.8246279858057,26.1843261604283,24.3062329836238,0.249810577937946,37.8969205681562,50.2798266473018,2.10417165275728,0.882365676478062,1.39120701372253 | |||
|short_description=p1@Cdh17 | |||
}} |
Revision as of 15:06, 4 August 2015
Short description: | p1@Cdh17 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cdh17_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000108303_5end |
EntrezGene: | 12557 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 8.79e-09 | 9 |
epithelial cell of alimentary canal | 8.79e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.35e-29 | 31 |
gastrointestinal system | 1.88e-26 | 47 |
mucosa | 4.67e-15 | 15 |
intestinal mucosa | 5.51e-13 | 13 |
wall of intestine | 5.51e-13 | 13 |
gastrointestinal system mucosa | 5.51e-13 | 13 |
digestive system | 7.44e-10 | 116 |
digestive tract | 7.44e-10 | 116 |
primitive gut | 7.44e-10 | 116 |
endoderm-derived structure | 2.07e-09 | 118 |
endoderm | 2.07e-09 | 118 |
presumptive endoderm | 2.07e-09 | 118 |
organ component layer | 4.71e-09 | 24 |
epithelium of mucosa | 8.79e-09 | 9 |
gastrointestinal system epithelium | 8.79e-09 | 9 |
intestinal epithelium | 8.79e-09 | 9 |
subdivision of digestive tract | 1.02e-08 | 114 |