FFCP PHASE1:Mm9::chr1:112818931..112818935,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=107 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:112818931..112818935,- | |||
|description=CAGE_peak_at_chr1:112818931..112818935,- | |description=CAGE_peak_at_chr1:112818931..112818935,- | ||
|id=chr1:112818931..112818935,- | |id=chr1:112818931..112818935,- | ||
|ontology_enrichment_celltype=CL:0000107!1.82e-12!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.11e-49,9;CL:0002319,2.01e-14,43;CL:0000221,4.23e-14,44;CL:0000133,4.23e-14,44;CL:0000540,7.92e-14,33;CL:0000047,7.92e-14,33;CL:0000031,7.92e-14,33;CL:0000404,7.92e-14,33;CL:0000393,9.76e-12,39;CL:0000211,9.76e-12,39;CL:0002321,6.38e-09,70;CL:0000217,1.32e-07,2;CL:0000328,1.32e-07,2;CL:0002573,1.32e-07,2;CL:0002376,1.32e-07,2;CL:0000218,1.32e-07,2;CL:0000692,1.32e-07,2;CL:0002377,1.32e-07,2;CL:0002375,1.32e-07,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!1.54e-15!11;UBERON:0002410!1.82e-12!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,2.49e-55,11;UBERON:0002410,1.11e-49,9;UBERON:0000013,8.93e-18,3;UBERON:0000011,8.93e-18,3;UBERON:0010313,3.41e-17,3;UBERON:0002342,3.41e-17,3;UBERON:0002005,3.41e-17,3;UBERON:0005428,3.41e-17,3;UBERON:0005062,3.41e-17,3;UBERON:0001016,2.47e-08,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0.202475267389826,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0,0,0,0.454357159999104,2.79614772395106,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0.457500602818626,0,0,0,0.20778804455956,0.162241263067758,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.243206428637567,0,0.439100230582101,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0.491764273019036,0,0.321101179975584,0.35163505977661,0,0,1.89304931649754,0.390438744296638,1.50796378412959,0,2.45078541490634,2.83076530788832,0.809621403349789,3.21481443702443,1.97643888973262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0.0826534557253359,0.26175594198403,0,0.621339313086926,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0.51776031175182,0,0.399024873401031,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0.476293691283074,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0.202475267389826,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0,0,0,0.454357159999104,2.79614772395106,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0.457500602818626,0,0,0,0.20778804455956,0.162241263067758,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.243206428637567,0,0.439100230582101,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0.491764273019036,0,0.321101179975584,0.35163505977661,0,0,1.89304931649754,0.390438744296638,1.50796378412959,0,2.45078541490634,2.83076530788832,0.809621403349789,3.21481443702443,1.97643888973262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0.0826534557253359,0.26175594198403,0,0.621339313086926,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0.51776031175182,0,0.399024873401031,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0.476293691283074,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0.231867835620421 | ||
|short_description=p@chr1:112818931..112818935,- | |short_description=p@chr1:112818931..112818935,- | ||
}} | }} |
Latest revision as of 15:26, 4 August 2015
Short description: | p@chr1:112818931..112818935, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:112818931..112818935, - |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.11e-49 | 9 |
neural cell | 2.01e-14 | 43 |
ectodermal cell | 4.23e-14 | 44 |
neurectodermal cell | 4.23e-14 | 44 |
neuron | 7.92e-14 | 33 |
neuronal stem cell | 7.92e-14 | 33 |
neuroblast | 7.92e-14 | 33 |
electrically signaling cell | 7.92e-14 | 33 |
electrically responsive cell | 9.76e-12 | 39 |
electrically active cell | 9.76e-12 | 39 |
embryonic cell | 6.38e-09 | 70 |
insulating cell | 1.32e-07 | 2 |
myelin accumulating cell | 1.32e-07 | 2 |
Schwann cell | 1.32e-07 | 2 |
non-myelinating Schwann cell | 1.32e-07 | 2 |
myelinating Schwann cell;;Schwann cell | 1.32e-07 | 2 |
terminal Schwann cell | 1.32e-07 | 2 |
immature Schwann cell | 1.32e-07 | 2 |
Schwann cell precursor | 1.32e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 2.49e-55 | 11 |
autonomic nervous system | 1.11e-49 | 9 |
sympathetic nervous system | 8.93e-18 | 3 |
parasympathetic nervous system | 8.93e-18 | 3 |
neural crest-derived structure | 3.41e-17 | 3 |
neural crest | 3.41e-17 | 3 |
enteric nervous system | 3.41e-17 | 3 |
vagal neural crest | 3.41e-17 | 3 |
neural fold | 3.41e-17 | 3 |
nervous system | 2.47e-08 | 75 |