FFCP PHASE1:Mm9::chr10:7588671..7588676,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=874 | |MCL_coexpression_id=874 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:7588671..7588676,+ | |||
|description=CAGE_peak_at_chr10:7588671..7588676,+ | |description=CAGE_peak_at_chr10:7588671..7588676,+ | ||
|id=chr10:7588671..7588676,+ | |id=chr10:7588671..7588676,+ | ||
|ontology_enrichment_celltype=CL:0002031!1.16e-07!25 | |ontology_enrichment_celltype=CL:0002031!1.16e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0002031,2.12e-12,25;CL:0000738,5.13e-09,17;CL:0002087,5.13e-09,17;CL:0000988,1.14e-08,32;CL:0002032,1.14e-08,32;CL:0000037,1.14e-08,32;CL:0000837,1.14e-08,32;CL:0000791,8.78e-08,9;CL:0000789,8.78e-08,9;CL:0002420,8.78e-08,9;CL:0002419,8.78e-08,9;CL:0000790,8.78e-08,9;CL:0002563,2.67e-07,9;CL:0002251,2.67e-07,9;CL:0000838,2.70e-07,12;CL:0000473,7.01e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.46e-13!48;UBERON:0002405!4.40e-13!70;UBERON:0001007!4.90e-12!128;UBERON:0001555!4.90e-12!128;UBERON:0007026!4.90e-12!128;UBERON:0002390!1.94e-11!45;UBERON:0003061!1.94e-11!45;UBERON:0004119!2.10e-11!130;UBERON:0000925!2.10e-11!130;UBERON:0006595!2.10e-11!130;UBERON:0004921!5.56e-11!126;UBERON:0004185!5.56e-11!126;UBERON:0004923!3.40e-10!24;UBERON:0000344!5.97e-09!15;UBERON:0003929!1.08e-08!55;UBERON:0004177!2.19e-08!29;UBERON:0005057!3.35e-08!51;UBERON:0005409!1.40e-07!59;UBERON:0001242!1.69e-07!13;UBERON:0000060!1.69e-07!13;UBERON:0001262!1.69e-07!13;UBERON:0004786!1.69e-07!13;UBERON:0005911!2.86e-07!69 | |ontology_enrichment_uberon=UBERON:0002193!3.46e-13!48;UBERON:0002405!4.40e-13!70;UBERON:0001007!4.90e-12!128;UBERON:0001555!4.90e-12!128;UBERON:0007026!4.90e-12!128;UBERON:0002390!1.94e-11!45;UBERON:0003061!1.94e-11!45;UBERON:0004119!2.10e-11!130;UBERON:0000925!2.10e-11!130;UBERON:0006595!2.10e-11!130;UBERON:0004921!5.56e-11!126;UBERON:0004185!5.56e-11!126;UBERON:0004923!3.40e-10!24;UBERON:0000344!5.97e-09!15;UBERON:0003929!1.08e-08!55;UBERON:0004177!2.19e-08!29;UBERON:0005057!3.35e-08!51;UBERON:0005409!1.40e-07!59;UBERON:0001242!1.69e-07!13;UBERON:0000060!1.69e-07!13;UBERON:0001262!1.69e-07!13;UBERON:0004786!1.69e-07!13;UBERON:0005911!2.86e-07!69 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004923,4.95e-15,24;UBERON:0005409,5.47e-15,47;UBERON:0000344,8.84e-14,15;UBERON:0002193,1.10e-13,48;UBERON:0002405,1.10e-13,48;UBERON:0000160,1.63e-13,31;UBERON:0001242,3.91e-11,13;UBERON:0001262,3.91e-11,13;UBERON:0004786,3.91e-11,13;UBERON:0002390,4.77e-11,45;UBERON:0003061,4.77e-11,45;UBERON:0001007,1.25e-10,116;UBERON:0001555,1.25e-10,116;UBERON:0007026,1.25e-10,116;UBERON:0004119,2.92e-10,118;UBERON:0000925,2.92e-10,118;UBERON:0006595,2.92e-10,118;UBERON:0004921,3.09e-09,114;UBERON:0002371,7.89e-08,16;UBERON:0003350,2.67e-07,9;UBERON:0004808,2.67e-07,9;UBERON:0001277,2.67e-07,9 | |||
|phase1_expression=0,1.04692622291808,1.36499771816861,0.60492842261366,1.50268718983904,2.68606835059024,4.20502753071946,12.5249623738329,0.563154888606667,0.936258105287974,4.79410311031414,4.06838010876216,6.50562773738582,4.63328132820686,2.33176833270964,2.83465374345756,0,12.9339487796877,13.4372144933624,5.51706547337439,0.0850432901510698,0,0,6.23970448894286,5.50582274561208,1.72269589234506,1.7230479846363,4.09395342103189,1.90023419456374,1.26015064879965,2.88249663851896,0,0,0,1.1554064790051,1.49611180822643,1.02084678131185,1.25559489221072,2.3440060335714,0,0.588231488031014,3.41522742479223,0.485510353031154,0.251793635951155,0,0,0,0,0,0,0,0,8.89247812106003,2.17608642603403,3.6970317905671,0,0,0,0,0,1.26766280701236,0,0,4.04954872776629,3.9554654502679,0,1.19840044207362,0.384218305321555,0,0,0,0,0,0.122490799214954,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0.427115042397309,0,0,0,0,0,0,0,0.649776417447669,0.896053774194671,0.140444420131752,0,0,0,0,0,0,0,0,0,0,2.2836775943812,1.29468941823586,0,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0.884610551949874,0.161766849947409,1.32504911076236,0.484875253135222,0,0,0,4.08731288333746,0,0.599902730993408,0,0,0,0,0,0,0,0,0,0.497627882440372,0.505445516867349,4.62972082950243,0,0,0.180062129805349,0,0,0,0.0937017245597288,0.517406741478031,0.215567992932842,0,0,0,0.556094498451196,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0,0,0.16455984991348,0.32833492815819,0,0.146199987425332,0.439100230582101,0.134206418760372,0,0,3.30418782983798,2.3800550999719,0,0,0,0,0,0.190225626112559,5.21981967698963,0.658795818896044,1.75934646160189,1.39269530428806,0.974820435595601,6.29173586057955,3.24207074812041,4.18196673834171,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0,0.126473074248515,0.590440591918409,0.627994911365499,0.493588655687202,0.592905254174298,0,0,0,0.202860121388503,0.241177159752417,0,0.287696137450811,0.162135226775035,0.549122826376163,5.75072826109418,0.744281895337007,2.18426371180192,1.01031551178845,0.538192240565737,2.41221760681684,0.369506380333209,0,0,0,0,0,0,0,0.315270288212382,0.8858587585951,0.159454768657487,0.491589944147214,0.690739927463582,0.144649058581512,16.5870412333199,24.4757557718419,0.983528546038072,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,1.32745138339963,0,0,0.754420319023592,0,0,0,0,0,0.632073515871632,0,0,0,0.18006109403131,0,0,0.177340233642274,0,0.164549020602121,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,3.78925087618806,0,3.93003025835061,0.619160603889667,1.11116716421827,2.44878994106098,5.60446333656203,2.0590035588587,0,0.279902904647316,0.276399947608848,3.81868247206045,0,0,0,0,0.218362563746178,0.134864346384821,0.0826534557253359,0.523511883968059,2.20345454596048,1.86401793926078,0.56369293868419,0,0,0,0.129159823477731,0,0,0,0,0,0,0.632022241256357,0.405450430580328,0.616265742988964,0,0.179026695667481,0.596044064343795,0.961563596159751,0.443068581523732,1.21159739937777,0.609654453239999,0.907435666231565,1.75424185331554,1.25075394132428,1.75315353272353,0,0,0.179427713218951,0.167884616364078,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0.419226325255965,0,0,0.206035057238894,0,0,0.25347929989024,0.377252682772152,0,0.0640251524048693,0.114870937911227,0,0.231768651889711,0.192909220463705,0,0,0.342869252385415,0,0.238436189947321,0.290692833264657,0,0,0,0.263069711437843,0,0,0,0,0,0.154936841185966,0,0,0.467863216890817,0,0,0.441182838239031,0.463735671240843 | |phase1_expression=0,1.04692622291808,1.36499771816861,0.60492842261366,1.50268718983904,2.68606835059024,4.20502753071946,12.5249623738329,0.563154888606667,0.936258105287974,4.79410311031414,4.06838010876216,6.50562773738582,4.63328132820686,2.33176833270964,2.83465374345756,0,12.9339487796877,13.4372144933624,5.51706547337439,0.0850432901510698,0,0,6.23970448894286,5.50582274561208,1.72269589234506,1.7230479846363,4.09395342103189,1.90023419456374,1.26015064879965,2.88249663851896,0,0,0,1.1554064790051,1.49611180822643,1.02084678131185,1.25559489221072,2.3440060335714,0,0.588231488031014,3.41522742479223,0.485510353031154,0.251793635951155,0,0,0,0,0,0,0,0,8.89247812106003,2.17608642603403,3.6970317905671,0,0,0,0,0,1.26766280701236,0,0,4.04954872776629,3.9554654502679,0,1.19840044207362,0.384218305321555,0,0,0,0,0,0.122490799214954,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0.427115042397309,0,0,0,0,0,0,0,0.649776417447669,0.896053774194671,0.140444420131752,0,0,0,0,0,0,0,0,0,0,2.2836775943812,1.29468941823586,0,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0.884610551949874,0.161766849947409,1.32504911076236,0.484875253135222,0,0,0,4.08731288333746,0,0.599902730993408,0,0,0,0,0,0,0,0,0,0.497627882440372,0.505445516867349,4.62972082950243,0,0,0.180062129805349,0,0,0,0.0937017245597288,0.517406741478031,0.215567992932842,0,0,0,0.556094498451196,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0,0,0.16455984991348,0.32833492815819,0,0.146199987425332,0.439100230582101,0.134206418760372,0,0,3.30418782983798,2.3800550999719,0,0,0,0,0,0.190225626112559,5.21981967698963,0.658795818896044,1.75934646160189,1.39269530428806,0.974820435595601,6.29173586057955,3.24207074812041,4.18196673834171,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0,0.126473074248515,0.590440591918409,0.627994911365499,0.493588655687202,0.592905254174298,0,0,0,0.202860121388503,0.241177159752417,0,0.287696137450811,0.162135226775035,0.549122826376163,5.75072826109418,0.744281895337007,2.18426371180192,1.01031551178845,0.538192240565737,2.41221760681684,0.369506380333209,0,0,0,0,0,0,0,0.315270288212382,0.8858587585951,0.159454768657487,0.491589944147214,0.690739927463582,0.144649058581512,16.5870412333199,24.4757557718419,0.983528546038072,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,1.32745138339963,0,0,0.754420319023592,0,0,0,0,0,0.632073515871632,0,0,0,0.18006109403131,0,0,0.177340233642274,0,0.164549020602121,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,3.78925087618806,0,3.93003025835061,0.619160603889667,1.11116716421827,2.44878994106098,5.60446333656203,2.0590035588587,0,0.279902904647316,0.276399947608848,3.81868247206045,0,0,0,0,0.218362563746178,0.134864346384821,0.0826534557253359,0.523511883968059,2.20345454596048,1.86401793926078,0.56369293868419,0,0,0,0.129159823477731,0,0,0,0,0,0,0.632022241256357,0.405450430580328,0.616265742988964,0,0.179026695667481,0.596044064343795,0.961563596159751,0.443068581523732,1.21159739937777,0.609654453239999,0.907435666231565,1.75424185331554,1.25075394132428,1.75315353272353,0,0,0.179427713218951,0.167884616364078,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0.419226325255965,0,0,0.206035057238894,0,0,0.25347929989024,0.377252682772152,0,0.0640251524048693,0.114870937911227,0,0.231768651889711,0.192909220463705,0,0,0.342869252385415,0,0.238436189947321,0.290692833264657,0,0,0,0.263069711437843,0,0,0,0,0,0.154936841185966,0,0,0.467863216890817,0,0,0.441182838239031,0.463735671240843 | ||
|short_description=p@chr10:7588671..7588676,+ | |short_description=p@chr10:7588671..7588676,+ | ||
}} | }} |
Latest revision as of 17:14, 4 August 2015
Short description: | p@chr10:7588671..7588676, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:7588671..7588676, + |
Coexpression cluster: | MCL_coexpression_mm9:874 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 2.12e-12 | 25 |
leukocyte | 5.13e-09 | 17 |
nongranular leukocyte | 5.13e-09 | 17 |
hematopoietic cell | 1.14e-08 | 32 |
hematopoietic oligopotent progenitor cell | 1.14e-08 | 32 |
hematopoietic stem cell | 1.14e-08 | 32 |
hematopoietic multipotent progenitor cell | 1.14e-08 | 32 |
mature alpha-beta T cell | 8.78e-08 | 9 |
alpha-beta T cell | 8.78e-08 | 9 |
immature T cell | 8.78e-08 | 9 |
mature T cell | 8.78e-08 | 9 |
immature alpha-beta T cell | 8.78e-08 | 9 |
intestinal epithelial cell | 2.67e-07 | 9 |
epithelial cell of alimentary canal | 2.67e-07 | 9 |
lymphoid lineage restricted progenitor cell | 2.70e-07 | 12 |
defensive cell | 7.01e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
organ component layer | 4.95e-15 | 24 |
gastrointestinal system | 5.47e-15 | 47 |
mucosa | 8.84e-14 | 15 |
hemolymphoid system | 1.10e-13 | 48 |
immune system | 1.10e-13 | 48 |
intestine | 1.63e-13 | 31 |
intestinal mucosa | 3.91e-11 | 13 |
wall of intestine | 3.91e-11 | 13 |
gastrointestinal system mucosa | 3.91e-11 | 13 |
hematopoietic system | 4.77e-11 | 45 |
blood island | 4.77e-11 | 45 |
digestive system | 1.25e-10 | 116 |
digestive tract | 1.25e-10 | 116 |
primitive gut | 1.25e-10 | 116 |
endoderm-derived structure | 2.92e-10 | 118 |
endoderm | 2.92e-10 | 118 |
presumptive endoderm | 2.92e-10 | 118 |
subdivision of digestive tract | 3.09e-09 | 114 |
bone marrow | 7.89e-08 | 16 |
epithelium of mucosa | 2.67e-07 | 9 |
gastrointestinal system epithelium | 2.67e-07 | 9 |
intestinal epithelium | 2.67e-07 | 9 |