FFCP PHASE1:Mm9::chr12:112658807..112658818,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:112658807..112658818,+ | |||
|description=CAGE_peak_at_chr12:112658807..112658818,+ | |description=CAGE_peak_at_chr12:112658807..112658818,+ | ||
|id=chr12:112658807..112658818,+ | |id=chr12:112658807..112658818,+ | ||
|ontology_enrichment_celltype=CL:0000239!9.73e-07!6;CL:0000677!9.73e-07!6;CL:0000212!9.73e-07!6;CL:0000584!9.73e-07!6 | |ontology_enrichment_celltype=CL:0000239!9.73e-07!6;CL:0000677!9.73e-07!6;CL:0000212!9.73e-07!6;CL:0000584!9.73e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.18e-12,3;CL:0000239,9.48e-12,6;CL:0000677,9.48e-12,6;CL:0000584,9.48e-12,6;CL:0000075,4.37e-10,7;CL:0002563,7.35e-08,9;CL:0002251,7.35e-08,9;CL:0000066,2.00e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.09e-16!43;UBERON:0005409!7.95e-15!59;UBERON:0004923!4.43e-14!24;UBERON:0000344!6.66e-11!15;UBERON:0001242!7.74e-09!13;UBERON:0000060!7.74e-09!13;UBERON:0001262!7.74e-09!13;UBERON:0004786!7.74e-09!13 | |ontology_enrichment_uberon=UBERON:0000160!2.09e-16!43;UBERON:0005409!7.95e-15!59;UBERON:0004923!4.43e-14!24;UBERON:0000344!6.66e-11!15;UBERON:0001242!7.74e-09!13;UBERON:0000060!7.74e-09!13;UBERON:0001262!7.74e-09!13;UBERON:0004786!7.74e-09!13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.16e-35,31;UBERON:0005409,2.19e-22,47;UBERON:0001242,4.91e-20,13;UBERON:0001262,4.91e-20,13;UBERON:0004786,4.91e-20,13;UBERON:0000344,3.21e-17,15;UBERON:0002108,7.45e-17,4;UBERON:0000331,2.19e-13,3;UBERON:0002116,2.19e-13,3;UBERON:0001204,2.19e-13,3;UBERON:0001168,2.19e-13,3;UBERON:0004923,3.50e-13,24;UBERON:0001155,4.29e-09,2;UBERON:0000059,4.29e-09,2;UBERON:0004119,2.72e-08,118;UBERON:0000925,2.72e-08,118;UBERON:0006595,2.72e-08,118;UBERON:0003350,7.35e-08,9;UBERON:0004808,7.35e-08,9;UBERON:0001277,7.35e-08,9;UBERON:0004921,1.75e-07,114;UBERON:0001007,2.66e-07,116;UBERON:0001555,2.66e-07,116;UBERON:0007026,2.66e-07,116 | |||
|phase1_expression=0,5.23463111459042,3.63999391511629,5.44435580352294,7.51343594919521,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.799962113967033,0.45881856213434,4.01962374880514,1.29228598847722,3.01659725760245,5.70070258369122,5.79669298447841,2.43903561720835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,1.86391761218122,0,0,4.34276993854605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,3.96502539580558,2.3800550999719,0,0,0,0.403367049246685,0.444756087689741,0.951128130562796,3.79623249235609,3.45867804920423,1.25667604400135,0.596869416123452,0.974820435595601,0.898819408654221,1.08069024937347,2.98711909881551,0,0,0,0.203651327845314,0,0.140271639780637,0.189709611372772,0.147610147979602,0,0.246794327843601,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.478364305972461,0.491589944147214,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,6.99045833850607,0,0,0,0,0,0,1.7488850197791,0,0,0,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0,0,0,0,0,0,0.436725127492355,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0.503653849092235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.187283014939765,0,0.229741875822453,0,0,0,0,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0,0,0.182927972872773,0.526139422875686,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0.231867835620421 | |phase1_expression=0,5.23463111459042,3.63999391511629,5.44435580352294,7.51343594919521,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.799962113967033,0.45881856213434,4.01962374880514,1.29228598847722,3.01659725760245,5.70070258369122,5.79669298447841,2.43903561720835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,1.86391761218122,0,0,4.34276993854605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,3.96502539580558,2.3800550999719,0,0,0,0.403367049246685,0.444756087689741,0.951128130562796,3.79623249235609,3.45867804920423,1.25667604400135,0.596869416123452,0.974820435595601,0.898819408654221,1.08069024937347,2.98711909881551,0,0,0,0.203651327845314,0,0.140271639780637,0.189709611372772,0.147610147979602,0,0.246794327843601,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.478364305972461,0.491589944147214,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,6.99045833850607,0,0,0,0,0,0,1.7488850197791,0,0,0,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0,0,0,0,0,0,0.436725127492355,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0.503653849092235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.187283014939765,0,0.229741875822453,0,0,0,0,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0,0,0.182927972872773,0.526139422875686,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p@chr12:112658807..112658818,+ | |short_description=p@chr12:112658807..112658818,+ | ||
}} | }} |
Latest revision as of 18:08, 4 August 2015
Short description: | p@chr12:112658807..112658818, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:112658807..112658818, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.18e-12 | 3 |
brush border epithelial cell | 9.48e-12 | 6 |
gut absorptive cell | 9.48e-12 | 6 |
enterocyte | 9.48e-12 | 6 |
columnar/cuboidal epithelial cell | 4.37e-10 | 7 |
intestinal epithelial cell | 7.35e-08 | 9 |
epithelial cell of alimentary canal | 7.35e-08 | 9 |
epithelial cell | 2.00e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.16e-35 | 31 |
gastrointestinal system | 2.19e-22 | 47 |
intestinal mucosa | 4.91e-20 | 13 |
wall of intestine | 4.91e-20 | 13 |
gastrointestinal system mucosa | 4.91e-20 | 13 |
mucosa | 3.21e-17 | 15 |
small intestine | 7.45e-17 | 4 |
ileal mucosa | 2.19e-13 | 3 |
ileum | 2.19e-13 | 3 |
mucosa of small intestine | 2.19e-13 | 3 |
wall of small intestine | 2.19e-13 | 3 |
organ component layer | 3.50e-13 | 24 |
colon | 4.29e-09 | 2 |
large intestine | 4.29e-09 | 2 |
endoderm-derived structure | 2.72e-08 | 118 |
endoderm | 2.72e-08 | 118 |
presumptive endoderm | 2.72e-08 | 118 |
epithelium of mucosa | 7.35e-08 | 9 |
gastrointestinal system epithelium | 7.35e-08 | 9 |
intestinal epithelium | 7.35e-08 | 9 |
subdivision of digestive tract | 1.75e-07 | 114 |
digestive system | 2.66e-07 | 116 |
digestive tract | 2.66e-07 | 116 |
primitive gut | 2.66e-07 | 116 |