FFCP PHASE1:Mm9::chr2:30663055..30663094,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr2:30663055..30663094,- to FFCP PHASE1:Mm9::chr2:30663055..30663094,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=558 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:30663055..30663094,- | |||
|description=CAGE_peak_at_chr2:30663055..30663094,- | |||
|id=chr2:30663055..30663094,- | |||
|ontology_enrichment_celltype=CL:0000221!2.70e-27!44;CL:0000133!2.70e-27!44;CL:0002319!7.81e-27!43;CL:0000055!3.95e-26!50;CL:0000393!4.64e-20!39;CL:0000211!4.64e-20!39;CL:0000540!1.20e-19!33;CL:0000047!1.20e-19!33;CL:0000031!1.20e-19!33;CL:0000404!1.20e-19!33;CL:0002321!7.26e-19!70;CL:0000220!7.26e-19!70;CL:0000117!9.77e-13!23;CL:0000337!9.77e-13!23;CL:0000333!6.23e-08!10;CL:0000095!6.23e-08!10;CL:0000243!6.23e-08!10;CL:0000123!6.23e-08!10;CL:0000125!6.23e-08!10;CL:0000030!6.23e-08!10;CL:0000339!6.23e-08!10;CL:0000107!2.01e-07!9;CL:0000548!2.15e-07!115;CL:0000004!2.15e-07!115;CL:0000255!2.15e-07!115;CL:0002453!2.53e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.24e-53,43;CL:0000221,3.33e-52,44;CL:0000133,3.33e-52,44;CL:0002321,2.05e-39,70;CL:0000393,5.18e-38,39;CL:0000211,5.18e-38,39;CL:0000540,3.78e-37,33;CL:0000047,3.78e-37,33;CL:0000031,3.78e-37,33;CL:0000404,3.78e-37,33;CL:0000117,6.38e-20,23;CL:0000337,6.38e-20,23;CL:0000723,1.68e-19,91;CL:0000048,1.68e-19,91;CL:0000034,9.92e-18,97;CL:0000107,3.04e-17,9;CL:0002453,5.61e-17,8;CL:0000333,2.13e-16,10;CL:0000095,2.13e-16,10;CL:0000243,2.13e-16,10;CL:0000123,2.13e-16,10;CL:0000125,2.13e-16,10;CL:0000030,2.13e-16,10;CL:0000339,2.13e-16,10;CL:0000128,5.40e-13,6;CL:0000126,5.40e-13,6;CL:0000127,5.40e-13,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.80e-17!75;UBERON:0001016!6.80e-17!75;UBERON:0001017!4.58e-16!73;UBERON:0005743!4.58e-16!73;UBERON:0004121!1.37e-10!102;UBERON:0000924!1.37e-10!102;UBERON:0006601!1.37e-10!102;UBERON:0000010!4.59e-08!11;UBERON:0002410!2.01e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.03e-27,75;UBERON:0001017,5.60e-26,73;UBERON:0004121,3.53e-19,95;UBERON:0000924,3.53e-19,95;UBERON:0006601,3.53e-19,95;UBERON:0002410,3.04e-17,9;UBERON:0000010,7.95e-17,11;UBERON:0000073,1.15e-07,54;UBERON:0002020,3.19e-07,34;UBERON:0000011,4.64e-07,3;UBERON:0000013,5.81e-07,3 | |||
|phase1_expression=3.36312578920067,0.348975407639361,0,0.30246421130683,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0.221730510655305,0,0,0,1.1554064790051,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,8.60630478782843,6.32272953503295,5.4921545683618,6.22175677037707,6.29938897314131,5.75010257459886,0.335565212115473,0,0,1.80081605225163,2.57880095944881,1.54701627683233,1.61853168687678,1.05798195854407,1.26766280701236,3.72728985276045,3.55717918444456,0.899899717281399,1.97773272513395,0.7104801149461,7.49000276296012,29.9690278150813,1.8664130215526,0.810035629990144,0.841299845405528,1.14260393761521,1.10434270475807,0.734944795289724,1.24599112323707,1.83843757322004,2.20231761998777,1.65993539510744,1.68967186581868,2.2420668914133,1.55528994124096,0.52091337055676,3.35019598801657,1.68828783009504,2.29197371665215,0.883885756421003,1.85083185038834,1.86399445825301,0.454357159999104,1.88928900266964,0.869593466105033,0,0.679971333707751,0,0,0,0.140444420131752,0.340860645156116,0.519572009205738,0,0.845060518660083,2.56652954828636,0,0,0.432982082022428,0,0,0,0,0.29688427812965,0.173485326766136,0,0,0.150722640552623,0.23517741427141,0.125666591329675,0,0.433798070759735,0,0.161766849947409,0.220841518460394,0,0,0.878342391034642,0.209446706813455,0,0,0,0.127070227073065,0.149790639404823,0,0.251308704225729,0,0,0.41557608911912,0.486723789203273,0.203678727700633,0.746441823660558,0.505445516867349,0,0.390361328888111,0.229902104433473,0.360124259610698,0.30140963567143,0.136072998302656,0,0.468508622798644,0.258703370739016,0.646703978798527,0.567318240503458,0.527853372491847,0.43839146485515,0,0.348252166522167,0,0.398068533636986,0,0,0,0.621377317606506,0.234526059981096,0.36012412292203,0,0,0.308534225774757,0.465067889500816,0,0.116765342367169,0.329119699826961,0.164167464079095,0,0,0,0,0,0.308713837137853,0,0,0.639864751605702,0.464473343720877,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0.569003702859245,0.342745537829186,0,0.407302655690628,0.387904974335251,0.140271639780637,0.379419222745544,0.295220295959204,0.470996183524124,0.616985819609003,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.488894929326078,0.339490171550376,0.234690248288502,0.837531287209079,0.238043640886014,0.780534591431195,0.315270288212382,0,0,0.491589944147214,0.518054945597687,0.867894351489069,0,0,0,0,0,0.117211686592203,0,0.252470927204373,2.2085575359138,2.34263246577983,3.23135096599198,6.93009514062401,4.23317480756549,3.39691836946599,4.04810701674894,3.50707029493574,5.53402889125133,0,0.567760340833074,0.534196811001766,0.162886959353576,1.81467135269789,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0,0,0,0.356497378384721,0,0,1.03135543248187,0.680879211507576,0.36012218806262,0.517434735131018,0.428674070063185,0.177340233642274,0.356737635204141,0.822745103010605,0.304464949114599,0.23467170806371,0,0.220528398054962,0,0,0,0,0,0,0.370850604021019,0,0.412773735926445,0.370389054739423,0,0,0.228778173206523,0,0,0,0,0.158167996790568,0,0.216010681643603,0,0,0.404593039154462,0.330613822901344,0.523511883968059,0.129614973291793,0,0,0.448549638131936,0.165458490457098,0.194451188344048,0.387479470433193,0.506868376472335,0,0.13020438484395,0.209718688851422,1.69108884578204,0.576060012515731,0.316011120628178,0.202725215290164,0.308132871494482,0,0.179026695667481,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0.288635524920988,0,0,0.221985953374065,0,0.167884616364078,0,0,0.36630324853453,0.214368379079066,1.00314420807073,0,0,0,0.343706364687375,0,0,0,0.45032120322422,0,0,0.207574695168353,0.399024873401031,0.512200817262403,0,0.209613162627982,0.367687016900028,1.11123363900808,0.412070114477788,0.320919209591815,0.252697211763798,0.760437899670719,0.754505365544305,0.187283014939765,0.256100609619477,0.17230640686684,0.476293691283074,0,0.192909220463705,0,0.294397840268795,0,0.354951612318675,0,0.290692833264657,0,0.338458431566706,0.365855945745545,0.789209134313529,0.135804113845862,0,0.237270036248348,0.394017929502254,0.409231043169689,0.929621047115796,0.192906610981141,0.749431733813838,0.701794825336225,0.214871054048298,0,0,0 | |phase1_expression=3.36312578920067,0.348975407639361,0,0.30246421130683,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0.221730510655305,0,0,0,1.1554064790051,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,8.60630478782843,6.32272953503295,5.4921545683618,6.22175677037707,6.29938897314131,5.75010257459886,0.335565212115473,0,0,1.80081605225163,2.57880095944881,1.54701627683233,1.61853168687678,1.05798195854407,1.26766280701236,3.72728985276045,3.55717918444456,0.899899717281399,1.97773272513395,0.7104801149461,7.49000276296012,29.9690278150813,1.8664130215526,0.810035629990144,0.841299845405528,1.14260393761521,1.10434270475807,0.734944795289724,1.24599112323707,1.83843757322004,2.20231761998777,1.65993539510744,1.68967186581868,2.2420668914133,1.55528994124096,0.52091337055676,3.35019598801657,1.68828783009504,2.29197371665215,0.883885756421003,1.85083185038834,1.86399445825301,0.454357159999104,1.88928900266964,0.869593466105033,0,0.679971333707751,0,0,0,0.140444420131752,0.340860645156116,0.519572009205738,0,0.845060518660083,2.56652954828636,0,0,0.432982082022428,0,0,0,0,0.29688427812965,0.173485326766136,0,0,0.150722640552623,0.23517741427141,0.125666591329675,0,0.433798070759735,0,0.161766849947409,0.220841518460394,0,0,0.878342391034642,0.209446706813455,0,0,0,0.127070227073065,0.149790639404823,0,0.251308704225729,0,0,0.41557608911912,0.486723789203273,0.203678727700633,0.746441823660558,0.505445516867349,0,0.390361328888111,0.229902104433473,0.360124259610698,0.30140963567143,0.136072998302656,0,0.468508622798644,0.258703370739016,0.646703978798527,0.567318240503458,0.527853372491847,0.43839146485515,0,0.348252166522167,0,0.398068533636986,0,0,0,0.621377317606506,0.234526059981096,0.36012412292203,0,0,0.308534225774757,0.465067889500816,0,0.116765342367169,0.329119699826961,0.164167464079095,0,0,0,0,0,0.308713837137853,0,0,0.639864751605702,0.464473343720877,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0.569003702859245,0.342745537829186,0,0.407302655690628,0.387904974335251,0.140271639780637,0.379419222745544,0.295220295959204,0.470996183524124,0.616985819609003,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.488894929326078,0.339490171550376,0.234690248288502,0.837531287209079,0.238043640886014,0.780534591431195,0.315270288212382,0,0,0.491589944147214,0.518054945597687,0.867894351489069,0,0,0,0,0,0.117211686592203,0,0.252470927204373,2.2085575359138,2.34263246577983,3.23135096599198,6.93009514062401,4.23317480756549,3.39691836946599,4.04810701674894,3.50707029493574,5.53402889125133,0,0.567760340833074,0.534196811001766,0.162886959353576,1.81467135269789,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0,0,0,0.356497378384721,0,0,1.03135543248187,0.680879211507576,0.36012218806262,0.517434735131018,0.428674070063185,0.177340233642274,0.356737635204141,0.822745103010605,0.304464949114599,0.23467170806371,0,0.220528398054962,0,0,0,0,0,0,0.370850604021019,0,0.412773735926445,0.370389054739423,0,0,0.228778173206523,0,0,0,0,0.158167996790568,0,0.216010681643603,0,0,0.404593039154462,0.330613822901344,0.523511883968059,0.129614973291793,0,0,0.448549638131936,0.165458490457098,0.194451188344048,0.387479470433193,0.506868376472335,0,0.13020438484395,0.209718688851422,1.69108884578204,0.576060012515731,0.316011120628178,0.202725215290164,0.308132871494482,0,0.179026695667481,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0.288635524920988,0,0,0.221985953374065,0,0.167884616364078,0,0,0.36630324853453,0.214368379079066,1.00314420807073,0,0,0,0.343706364687375,0,0,0,0.45032120322422,0,0,0.207574695168353,0.399024873401031,0.512200817262403,0,0.209613162627982,0.367687016900028,1.11123363900808,0.412070114477788,0.320919209591815,0.252697211763798,0.760437899670719,0.754505365544305,0.187283014939765,0.256100609619477,0.17230640686684,0.476293691283074,0,0.192909220463705,0,0.294397840268795,0,0.354951612318675,0,0.290692833264657,0,0.338458431566706,0.365855945745545,0.789209134313529,0.135804113845862,0,0.237270036248348,0.394017929502254,0.409231043169689,0.929621047115796,0.192906610981141,0.749431733813838,0.701794825336225,0.214871054048298,0,0,0 | ||
|short_description=p@chr2:30663055..30663094,- | |||
}} | }} |
Latest revision as of 00:18, 5 August 2015
Short description: | p@chr2:30663055..30663094, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:30663055..30663094, - |
Coexpression cluster: | MCL_coexpression_mm9:558 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.24e-53 | 43 |
ectodermal cell | 3.33e-52 | 44 |
neurectodermal cell | 3.33e-52 | 44 |
embryonic cell | 2.05e-39 | 70 |
electrically responsive cell | 5.18e-38 | 39 |
electrically active cell | 5.18e-38 | 39 |
neuron | 3.78e-37 | 33 |
neuronal stem cell | 3.78e-37 | 33 |
neuroblast | 3.78e-37 | 33 |
electrically signaling cell | 3.78e-37 | 33 |
CNS neuron (sensu Vertebrata) | 6.38e-20 | 23 |
neuroblast (sensu Vertebrata) | 6.38e-20 | 23 |
somatic stem cell | 1.68e-19 | 91 |
multi fate stem cell | 1.68e-19 | 91 |
stem cell | 9.92e-18 | 97 |
autonomic neuron | 3.04e-17 | 9 |
oligodendrocyte precursor cell | 5.61e-17 | 8 |
migratory neural crest cell | 2.13e-16 | 10 |
neuron associated cell | 2.13e-16 | 10 |
glial cell (sensu Vertebrata) | 2.13e-16 | 10 |
neuron associated cell (sensu Vertebrata) | 2.13e-16 | 10 |
glial cell | 2.13e-16 | 10 |
glioblast | 2.13e-16 | 10 |
glioblast (sensu Vertebrata) | 2.13e-16 | 10 |
oligodendrocyte | 5.40e-13 | 6 |
macroglial cell | 5.40e-13 | 6 |
astrocyte | 5.40e-13 | 6 |
Ontology term | p-value | n |
---|---|---|
nervous system | 9.03e-27 | 75 |
central nervous system | 5.60e-26 | 73 |
ectoderm-derived structure | 3.53e-19 | 95 |
ectoderm | 3.53e-19 | 95 |
presumptive ectoderm | 3.53e-19 | 95 |
autonomic nervous system | 3.04e-17 | 9 |
peripheral nervous system | 7.95e-17 | 11 |
regional part of nervous system | 1.15e-07 | 54 |
gray matter | 3.19e-07 | 34 |
parasympathetic nervous system | 4.64e-07 | 3 |
sympathetic nervous system | 5.81e-07 | 3 |