FFCP PHASE1:Mm9::chr15:16658662..16658676,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr15:16658662..16658676,+ to FFCP PHASE1:Mm9::chr15:16658662..16658676,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=235 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:16658662..16658676,+ | |||
|description=CAGE_peak_at_chr15:16658662..16658676,+ | |||
|id=chr15:16658662..16658676,+ | |||
|ontology_enrichment_celltype=CL:0000540!9.07e-11!33;CL:0000047!9.07e-11!33;CL:0000031!9.07e-11!33;CL:0000404!9.07e-11!33;CL:0000117!4.38e-08!23;CL:0000337!4.38e-08!23;CL:0000393!3.17e-07!39;CL:0000211!3.17e-07!39;CL:0000221!8.85e-07!44;CL:0000133!8.85e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.36e-09,33;CL:0000047,2.36e-09,33;CL:0000031,2.36e-09,33;CL:0000404,2.36e-09,33;CL:0000393,5.82e-07,39;CL:0000211,5.82e-07,39;CL:0000221,9.21e-07,44;CL:0000133,9.21e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.30e-23!102;UBERON:0000924!1.30e-23!102;UBERON:0006601!1.30e-23!102;UBERON:0000073!1.27e-21!75;UBERON:0001016!1.27e-21!75;UBERON:0001017!1.96e-21!73;UBERON:0005743!1.96e-21!73;UBERON:0002346!5.26e-20!71;UBERON:0003075!5.26e-20!71;UBERON:0007284!5.26e-20!71;UBERON:0000033!1.96e-18!63;UBERON:0001049!6.04e-17!52;UBERON:0005068!6.04e-17!52;UBERON:0006241!6.04e-17!52;UBERON:0007135!6.04e-17!52;UBERON:0000955!1.57e-16!50;UBERON:0006238!1.57e-16!50;UBERON:0003056!3.52e-16!49;UBERON:0002616!7.25e-16!49;UBERON:0003080!2.34e-14!40;UBERON:0002780!1.16e-13!39;UBERON:0001890!1.16e-13!39;UBERON:0006240!1.16e-13!39;UBERON:0002020!1.97e-13!34;UBERON:0007811!6.73e-13!86;UBERON:0000153!6.65e-12!94;UBERON:0002791!2.82e-11!29;UBERON:0003528!2.82e-11!29;UBERON:0001893!2.82e-11!29;UBERON:0002021!1.47e-08!10;UBERON:0000411!1.47e-08!10;UBERON:0001950!1.47e-08!10;UBERON:0002619!4.70e-08!17;UBERON:0000956!8.67e-08!21;UBERON:0001869!8.67e-08!21;UBERON:0000203!8.67e-08!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.01e-24,73;UBERON:0001016,3.09e-24,75;UBERON:0004121,1.42e-21,95;UBERON:0000924,1.42e-21,95;UBERON:0006601,1.42e-21,95;UBERON:0002346,1.41e-19,64;UBERON:0003075,1.41e-19,64;UBERON:0007284,1.41e-19,64;UBERON:0000073,5.84e-19,54;UBERON:0001049,2.54e-17,52;UBERON:0005068,2.54e-17,52;UBERON:0006241,2.54e-17,52;UBERON:0007135,2.54e-17,52;UBERON:0010371,2.52e-16,73;UBERON:0003056,5.72e-16,49;UBERON:0000955,3.47e-15,47;UBERON:0006238,3.47e-15,47;UBERON:0003080,4.81e-15,40;UBERON:0002616,2.50e-14,46;UBERON:0002020,2.56e-14,34;UBERON:0002780,4.17e-14,39;UBERON:0001890,4.17e-14,39;UBERON:0006240,4.17e-14,39;UBERON:0003528,3.36e-12,29;UBERON:0002791,3.36e-12,29;UBERON:0001893,3.36e-12,29;UBERON:0002021,3.67e-12,10;UBERON:0000411,3.67e-12,10;UBERON:0001950,3.67e-12,10;UBERON:0010314,1.82e-11,92;UBERON:0002619,2.33e-10,17;UBERON:0000956,4.34e-09,21;UBERON:0001869,4.34e-09,21;UBERON:0000203,4.34e-09,21 | |||
|phase1_expression=0.80074423552397,0.348975407639361,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33720779770456,0,0,0.799962113967033,1.37645568640302,0.57423196411502,0,0.215471232685889,0.380046838912748,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84401275633236,1.5869729378161,2.53532561402472,0,0,0,0,0,0,0,0.622137673850866,0,0.210324961351382,0.856952953211411,1.10434270475807,1.5923803897944,0.287536413054709,0.919218786610021,2.20231761998777,5.61824287574826,5.68344173048101,0.923204014111357,1.09785172322892,2.6045668527838,0.837548997004143,1.68828783009504,6.41752640662602,2.65165726926301,5.69486723196412,2.60959224155421,0.075726193333184,1.28471652181535,0,0,0,0,0,0,0.280888840263504,0,0,0,1.26759077799012,0,0,0,0,0,0,0.45673551887624,0,0.445326417194474,0.520455980298408,1.52232739156071,0,0.452167921657868,0.940709657085638,1.0053327306374,0,0.722996784599558,0,0.323533699894818,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,9.43681028250383,25.1625331550245,7.16229807043327,13.3844726548053,17.1329356411321,4.1557608911912,15.2506787283692,0,0,0,0,4.16385417480652,1.83921683546778,4.32149111532838,1.20563854268572,0.680364991513279,0.640568601424249,0.374806898238915,1.55222022443409,0,0.378212160335639,0.351902248327898,1.09597866213787,1.11218899690239,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0,0,38.4830605872353,11.7311258112384,0.330418782983798,0,0.426576501070468,0.232236671860439,1.03093969057675,0.605050573870028,1.55664630691409,1.14135375667535,0,0.658795818896044,0.754005626400808,0.596869416123452,0.19496408711912,0,0,0.398282546508734,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,2.88991061978026,3.7507739709505,0,0,5.67914794949262,2.73307121007647,0,2.62865677747807,2.22798674082394,0.283076530788832,1.21443210502468,3.21481443702443,1.97643888973262,6.42642632843614,0.283880170416537,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,3.24109969256358,0.517434735131018,2.35770738534752,2.12808280370728,1.24858172321449,0.493647061806363,0,0,0,0.220528398054962,0.98931751764888,0,0.422190474497091,0.596861720015682,0.820704498725306,0.291480836629851,3.33765543618917,0,0,0,0,0,0,0,0,0,0,0.790839983952838,0,0.648032044930808,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0.506868376472335,0.938857909166032,0.2604087696879,0.209718688851422,0,0,0.632022241256357,0.202725215290164,0.205421914329655,0,0,0.39736270956253,0.120195449519969,0.590758108698309,0.100966449948148,0.15241361331,0.403304740547362,0.974578807397524,0.962118416403295,0.467507608726276,0.453460767230423,0,0,0,0.386379188064381,0,0,0.428736758158132,0.501572104035363,14.6835479080437,6.44455331110048,9.73922372846974,8.248952752497,8.90607275701835,11.3309084608455,6.75022500231806,5.40385443869065,7.70342095273148,6.73088405277366,0.207574695168353,1.19707462020309,1.87806966329548,1.21553358534147,0.838452650511929,0.735374033800057,1.33348036680969,2.47242068686673,1.60459604795908,0.758091635291392,1.52087579934144,1.13175804831646,1.87283014939765,2.11283002936069,2.12511235135769,2.85776214769844,2.31768651889711,1.73618298417335,1.64834360321323,2.35518272215036,1.37147700954166,0.532427418478012,1.90748951957857,2.0348498328526,2.07040636913727,1.52306294205018,2.19513567447327,1.57841826862706,1.35804113845862,2.80571135828869,1.42362021749009,2.06859412988683,1.63692417267876,1.08455788830176,0.192906610981141,2.24829520144151,1.16965804222704,0.859484216193193,0.765153328275374,0.661774257358546,0.231867835620421 | |phase1_expression=0.80074423552397,0.348975407639361,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33720779770456,0,0,0.799962113967033,1.37645568640302,0.57423196411502,0,0.215471232685889,0.380046838912748,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84401275633236,1.5869729378161,2.53532561402472,0,0,0,0,0,0,0,0.622137673850866,0,0.210324961351382,0.856952953211411,1.10434270475807,1.5923803897944,0.287536413054709,0.919218786610021,2.20231761998777,5.61824287574826,5.68344173048101,0.923204014111357,1.09785172322892,2.6045668527838,0.837548997004143,1.68828783009504,6.41752640662602,2.65165726926301,5.69486723196412,2.60959224155421,0.075726193333184,1.28471652181535,0,0,0,0,0,0,0.280888840263504,0,0,0,1.26759077799012,0,0,0,0,0,0,0.45673551887624,0,0.445326417194474,0.520455980298408,1.52232739156071,0,0.452167921657868,0.940709657085638,1.0053327306374,0,0.722996784599558,0,0.323533699894818,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,9.43681028250383,25.1625331550245,7.16229807043327,13.3844726548053,17.1329356411321,4.1557608911912,15.2506787283692,0,0,0,0,4.16385417480652,1.83921683546778,4.32149111532838,1.20563854268572,0.680364991513279,0.640568601424249,0.374806898238915,1.55222022443409,0,0.378212160335639,0.351902248327898,1.09597866213787,1.11218899690239,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0,0,38.4830605872353,11.7311258112384,0.330418782983798,0,0.426576501070468,0.232236671860439,1.03093969057675,0.605050573870028,1.55664630691409,1.14135375667535,0,0.658795818896044,0.754005626400808,0.596869416123452,0.19496408711912,0,0,0.398282546508734,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,2.88991061978026,3.7507739709505,0,0,5.67914794949262,2.73307121007647,0,2.62865677747807,2.22798674082394,0.283076530788832,1.21443210502468,3.21481443702443,1.97643888973262,6.42642632843614,0.283880170416537,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,3.24109969256358,0.517434735131018,2.35770738534752,2.12808280370728,1.24858172321449,0.493647061806363,0,0,0,0.220528398054962,0.98931751764888,0,0.422190474497091,0.596861720015682,0.820704498725306,0.291480836629851,3.33765543618917,0,0,0,0,0,0,0,0,0,0,0.790839983952838,0,0.648032044930808,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0.506868376472335,0.938857909166032,0.2604087696879,0.209718688851422,0,0,0.632022241256357,0.202725215290164,0.205421914329655,0,0,0.39736270956253,0.120195449519969,0.590758108698309,0.100966449948148,0.15241361331,0.403304740547362,0.974578807397524,0.962118416403295,0.467507608726276,0.453460767230423,0,0,0,0.386379188064381,0,0,0.428736758158132,0.501572104035363,14.6835479080437,6.44455331110048,9.73922372846974,8.248952752497,8.90607275701835,11.3309084608455,6.75022500231806,5.40385443869065,7.70342095273148,6.73088405277366,0.207574695168353,1.19707462020309,1.87806966329548,1.21553358534147,0.838452650511929,0.735374033800057,1.33348036680969,2.47242068686673,1.60459604795908,0.758091635291392,1.52087579934144,1.13175804831646,1.87283014939765,2.11283002936069,2.12511235135769,2.85776214769844,2.31768651889711,1.73618298417335,1.64834360321323,2.35518272215036,1.37147700954166,0.532427418478012,1.90748951957857,2.0348498328526,2.07040636913727,1.52306294205018,2.19513567447327,1.57841826862706,1.35804113845862,2.80571135828869,1.42362021749009,2.06859412988683,1.63692417267876,1.08455788830176,0.192906610981141,2.24829520144151,1.16965804222704,0.859484216193193,0.765153328275374,0.661774257358546,0.231867835620421 | ||
|short_description=p@chr15:16658662..16658676,+ | |||
}} | }} |
Latest revision as of 02:39, 5 August 2015
Short description: | p@chr15:16658662..16658676, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:16658662..16658676, + |
Coexpression cluster: | MCL_coexpression_mm9:235 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.36e-09 | 33 |
neuronal stem cell | 2.36e-09 | 33 |
neuroblast | 2.36e-09 | 33 |
electrically signaling cell | 2.36e-09 | 33 |
electrically responsive cell | 5.82e-07 | 39 |
electrically active cell | 5.82e-07 | 39 |
ectodermal cell | 9.21e-07 | 44 |
neurectodermal cell | 9.21e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.01e-24 | 73 |
nervous system | 3.09e-24 | 75 |
ectoderm-derived structure | 1.42e-21 | 95 |
ectoderm | 1.42e-21 | 95 |
presumptive ectoderm | 1.42e-21 | 95 |
neurectoderm | 1.41e-19 | 64 |
neural plate | 1.41e-19 | 64 |
presumptive neural plate | 1.41e-19 | 64 |
regional part of nervous system | 5.84e-19 | 54 |
neural tube | 2.54e-17 | 52 |
neural rod | 2.54e-17 | 52 |
future spinal cord | 2.54e-17 | 52 |
neural keel | 2.54e-17 | 52 |
ecto-epithelium | 2.52e-16 | 73 |
pre-chordal neural plate | 5.72e-16 | 49 |
brain | 3.47e-15 | 47 |
future brain | 3.47e-15 | 47 |
anterior neural tube | 4.81e-15 | 40 |
regional part of brain | 2.50e-14 | 46 |
gray matter | 2.56e-14 | 34 |
regional part of forebrain | 4.17e-14 | 39 |
forebrain | 4.17e-14 | 39 |
future forebrain | 4.17e-14 | 39 |
brain grey matter | 3.36e-12 | 29 |
regional part of telencephalon | 3.36e-12 | 29 |
telencephalon | 3.36e-12 | 29 |
occipital lobe | 3.67e-12 | 10 |
visual cortex | 3.67e-12 | 10 |
neocortex | 3.67e-12 | 10 |
structure with developmental contribution from neural crest | 1.82e-11 | 92 |
regional part of cerebral cortex | 2.33e-10 | 17 |
cerebral cortex | 4.34e-09 | 21 |
cerebral hemisphere | 4.34e-09 | 21 |
pallium | 4.34e-09 | 21 |