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FFCP PHASE1:Mm9::chr1:172797892..172797915,-: Difference between revisions

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{{FFCP|EntrezGene=226641|HGNC=|UniProt=F6VAN0,Q8BZ84|association_with_transcript=0bp_to_ENSMUST00000027974,NM_001081304,uc007dmj.1_5end|description=CAGE_peak_1_at_Atf6_5end|id=chr1:172797892..172797915,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!9.50e-14!47;UBERON:0007023!6.73e-12!51;UBERON:0002365!1.15e-09!25;UBERON:0002330!1.15e-09!25;UBERON:0000466!5.04e-09!79;UBERON:0002107!1.17e-08!22;UBERON:0007499!1.17e-08!22;UBERON:0006925!1.17e-08!22;UBERON:0009497!1.17e-08!22;UBERON:0000015!1.17e-08!22;UBERON:0002423!1.17e-08!22;UBERON:0006235!1.17e-08!22;UBERON:0008835!1.17e-08!22;UBERON:0003894!1.17e-08!22;UBERON:0004161!1.17e-08!22;UBERON:0008836!1.17e-08!22;UBERON:0009854!1.52e-08!23;UBERON:0009856!1.52e-08!23;UBERON:0000926!2.02e-08!193;UBERON:0004120!2.02e-08!193;UBERON:0006603!2.02e-08!193;UBERON:0002100!1.28e-07!98;UBERON:0005256!1.61e-07!47;UBERON:0004872!2.10e-07!33|ontology_enrichment_uberon_v019_2=UBERON:0003914,9.50e-14,47;UBERON:0007023,6.73e-12,51;UBERON:0002100,6.07e-10,90;UBERON:0002365,1.15e-09,25;UBERON:0002330,1.15e-09,25;UBERON:0002107,1.17e-08,22;UBERON:0007499,1.17e-08,22;UBERON:0006925,1.17e-08,22;UBERON:0009497,1.17e-08,22;UBERON:0000015,1.17e-08,22;UBERON:0002423,1.17e-08,22;UBERON:0006235,1.17e-08,22;UBERON:0008835,1.17e-08,22;UBERON:0003894,1.17e-08,22;UBERON:0004161,1.17e-08,22;UBERON:0008836,1.17e-08,22;UBERON:0009854,1.52e-08,23;UBERON:0009856,1.52e-08,23;UBERON:0005177,1.77e-08,79;UBERON:0005256,9.22e-08,45;UBERON:0004872,2.10e-07,33|phase1_expression=26.9050063136054,32.1057375028212,29.5749505603198,23.8946726932396,24.543890767371,22.3279431642813,18.9226238882376,8.13476937681931,31.3958850398217,25.5130333690973,24.1417335197962,15.7151153220813,6.33442700745461,3.84649770643589,28.9805492779627,37.6603997345076,25.1842276126133,66.0893236425508,66.9118435996005,46.2584720459853,34.4425325111833,46.9646199180187,42.0531660513686,29.918583062367,27.2997044469932,18.9496548157957,18.5227658348402,20.2542958724736,33.0640749854091,36.7963989449499,25.9424697466706,10.1604907753541,17.8368788399525,0,12.7094712690561,8.81043620400009,12.0459920194798,26.7860243671621,28.1280724028568,30.3643771504803,21.1763335691165,23.2235464885872,23.7900072985265,25.305260413091,28.3855407414641,40.1967387234083,5.47673941043627,6.75877984779384,9.00713349211335,14.387812531497,7.41928034614421,1.43752564364972,64.260738120113,10.8804321301702,10.4189077734164,25.7259436035947,31.2321449533245,33.0030139057563,8.9019242778223,15.869729378161,13.9442908771359,4.06613438482959,3.55717918444456,12.1486461832989,22.7439263390404,14.9200824138681,8.98800331555214,7.68436610643109,8.50254820929517,7.83034442323806,7.78202357000113,6.85562362569129,10.3808214247258,8.32937434661688,9.77623804386011,11.9498442259303,31.9336054898227,23.111408193419,20.7368819895929,11.7378796079873,10.7955419450843,7.8137005583514,15.6342479440773,15.1945904708554,19.4053774676549,10.9012576625257,14.0947963991112,13.6071595452469,48.6162161199042,30.3797671629278,62.031000582159,48.1837371109576,67.3171620370673,54.5100223554195,92.268251277569,95.8777538388298,42.8355481401843,30.1661670963162,18.1850203222008,20.4936953215997,22.6757905840456,29.5150898052931,25.4805239706646,0,14.0719176657289,12.4146334082798,17.1878311305026,52.5245846707676,136.978140449354,32.5088284551966,11.6235168933311,14.0054120023585,13.8369298353635,20.4982791151567,24.2232736699552,24.5049853092867,51.6637482564841,55.9599511280058,41.5766959416441,23.1326595424795,34.8929599167422,32.4866419600599,27.9587641827183,47.1377083188591,46.497168912587,48.2813834344238,61.2255286225253,32.9946502046374,52.988284689468,25.1648274200102,41.632554856495,10.4293112253677,39.631945003839,31.708716708961,31.3759947284936,26.6075671431123,19.2476397677098,36.5756493593673,43.468314450592,35.1437899330412,11.3204785377552,8.27647575960503,17.4660265911189,21.5507889505073,21.4314972326683,24.3416068541215,19.1151518101847,33.114031454594,9.48499168904506,18.5323958564463,20.2343792788541,12.7133524807993,17.2389294519871,25.074155989596,21.6071243228341,15.5246728118425,47.7504967373,44.5211879308457,36.6570914220314,32.7258720606093,25.5633405379395,26.2890609733082,32.4340287751738,33.2531551653112,32.7046279321242,34.4150238230604,39.436190005744,53.0114654346949,53.6465110717946,64.0253109908471,87.5543143095242,73.9771936372182,95.9434003821891,142.124597467234,38.6933505357994,12.3485534855141,35.3548097792664,28.0317600663357,15.9966187901425,15.5598570146494,17.912577123771,25.6138076271645,24.2392067790909,19.2127882373685,27.5226855695817,23.5519505255336,21.8661631656234,23.4768637008558,27.6849003709151,41.3456927980942,30.0431889325825,29.4729084416463,8.15571974098251,17.708519454508,12.3978509240388,15.4775009162439,13.9645790760691,19.8484370289602,24.7887225527089,34.2455543312677,34.2257226694197,33.68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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:226641
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:F6VAN0,uniprot:Q8BZ84
|association_with_transcript=0bp_to_ENSMUST00000027974,NM_001081304,uc007dmj.1_5end
|cluster_id=chr1:172797892..172797915,-
|description=CAGE_peak_1_at_Atf6_5end
|id=chr1:172797892..172797915,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0003914,9.50e-14,47;UBERON:0007023,6.73e-12,51;UBERON:0002100,6.07e-10,90;UBERON:0002365,1.15e-09,25;UBERON:0002330,1.15e-09,25;UBERON:0002107,1.17e-08,22;UBERON:0007499,1.17e-08,22;UBERON:0006925,1.17e-08,22;UBERON:0009497,1.17e-08,22;UBERON:0000015,1.17e-08,22;UBERON:0002423,1.17e-08,22;UBERON:0006235,1.17e-08,22;UBERON:0008835,1.17e-08,22;UBERON:0003894,1.17e-08,22;UBERON:0004161,1.17e-08,22;UBERON:0008836,1.17e-08,22;UBERON:0009854,1.52e-08,23;UBERON:0009856,1.52e-08,23;UBERON:0005177,1.77e-08,79;UBERON:0005256,9.22e-08,45;UBERON:0004872,2.10e-07,33
|phase1_expression=26.9050063136054,32.1057375028212,29.5749505603198,23.8946726932396,24.543890767371,22.3279431642813,18.9226238882376,8.13476937681931,31.3958850398217,25.5130333690973,24.1417335197962,15.7151153220813,6.33442700745461,3.84649770643589,28.9805492779627,37.6603997345076,25.1842276126133,66.0893236425508,66.9118435996005,46.2584720459853,34.4425325111833,46.9646199180187,42.0531660513686,29.918583062367,27.2997044469932,18.9496548157957,18.5227658348402,20.2542958724736,33.0640749854091,36.7963989449499,25.9424697466706,10.1604907753541,17.8368788399525,0,12.7094712690561,8.81043620400009,12.0459920194798,26.7860243671621,28.1280724028568,30.3643771504803,21.1763335691165,23.2235464885872,23.7900072985265,25.305260413091,28.3855407414641,40.1967387234083,5.47673941043627,6.75877984779384,9.00713349211335,14.387812531497,7.41928034614421,1.43752564364972,64.260738120113,10.8804321301702,10.4189077734164,25.7259436035947,31.2321449533245,33.0030139057563,8.9019242778223,15.869729378161,13.9442908771359,4.06613438482959,3.55717918444456,12.1486461832989,22.7439263390404,14.9200824138681,8.98800331555214,7.68436610643109,8.50254820929517,7.83034442323806,7.78202357000113,6.85562362569129,10.3808214247258,8.32937434661688,9.77623804386011,11.9498442259303,31.9336054898227,23.111408193419,20.7368819895929,11.7378796079873,10.7955419450843,7.8137005583514,15.6342479440773,15.1945904708554,19.4053774676549,10.9012576625257,14.0947963991112,13.6071595452469,48.6162161199042,30.3797671629278,62.031000582159,48.1837371109576,67.3171620370673,54.5100223554195,92.268251277569,95.8777538388298,42.8355481401843,30.1661670963162,18.1850203222008,20.4936953215997,22.6757905840456,29.5150898052931,25.4805239706646,0,14.0719176657289,12.4146334082798,17.1878311305026,52.5245846707676,136.978140449354,32.5088284551966,11.6235168933311,14.0054120023585,13.8369298353635,20.4982791151567,24.2232736699552,24.5049853092867,51.6637482564841,55.9599511280058,41.5766959416441,23.1326595424795,34.8929599167422,32.4866419600599,27.9587641827183,47.1377083188591,46.497168912587,48.2813834344238,61.2255286225253,32.9946502046374,52.988284689468,25.1648274200102,41.632554856495,10.4293112253677,39.631945003839,31.708716708961,31.3759947284936,26.6075671431123,19.2476397677098,36.5756493593673,43.468314450592,35.1437899330412,11.3204785377552,8.27647575960503,17.4660265911189,21.5507889505073,21.4314972326683,24.3416068541215,19.1151518101847,33.114031454594,9.48499168904506,18.5323958564463,20.2343792788541,12.7133524807993,17.2389294519871,25.074155989596,21.6071243228341,15.5246728118425,47.7504967373,44.5211879308457,36.6570914220314,32.7258720606093,25.5633405379395,26.2890609733082,32.4340287751738,33.2531551653112,32.7046279321242,34.4150238230604,39.436190005744,53.0114654346949,53.6465110717946,64.0253109908471,87.5543143095242,73.9771936372182,95.9434003821891,142.124597467234,38.6933505357994,12.3485534855141,35.3548097792664,28.0317600663357,15.9966187901425,15.5598570146494,17.912577123771,25.6138076271645,24.2392067790909,19.2127882373685,27.5226855695817,23.5519505255336,21.8661631656234,23.4768637008558,27.6849003709151,41.3456927980942,30.0431889325825,29.4729084416463,8.15571974098251,17.708519454508,12.3978509240388,15.4775009162439,13.9645790760691,19.8484370289602,24.7887225527089,34.2455543312677,34.2257226694197,33.6874257506515,93.9754827866262,28.8642032888843,24.7664333842636,32.3801441834189,34.283360514657,34.9706881641004,29.0273471030819,37.6881940060562,72.6365815952159,40.0859663254599,33.0666875012915,48.7504641445739,43.6852742360385,61.124088463201,69.2474016194581,96.0062607513101,56.534476190981,13.4538902357044,18.0891123850649,17.6534889206196,17.8364588699262,31.9936951713868,37.1348079782181,36.880259445124,36.4137182885301,39.8636441367795,34.1233204927022,50.7976275618788,39.0268059016924,49.1806799177139,54.284862218138,42.4246433378593,38.8493775685039,36.4236505122247,27.775252067888,24.7316658709549,27.8689407140348,42.1626448431303,12.6203287766503,15.6175497718655,16.1567548299599,15.7719406648684,17.8238939265915,18.3999745012741,13.3587531552715,17.82760733259,15.0209355619679,39.5225219198823,35.0592010464423,15.8478387263857,16.4515828947112,32.9940245945071,258.853019762928,16.2663026223838,22.3719432153916,54.1296578899428,55.8120577544661,77.1662221339258,64.0902167057188,65.0725375764735,59.5350621902485,111.560975551343,131.773260718748,133.044850790161,34.3844001811326,14.4048875225048,10.3486947026204,13.2888961719587,22.8768901398533,17.8368817602071,17.9358432456312,13.700922710157,38.7208318305122,64.820613684329,202.886126210565,54.4124634706884,23.4123418709063,30.5183400136469,33.9017456968908,42.3483521342258,30.0225261728746,27.999220603587,53.1408439281322,21.2578474002119,27.9643736328265,28.4436370077083,34.9937222965824,31.1138315560871,31.4460095488632,33.1684942007069,33.3061936868661,14.3200592702267,16.7658076598002,19.9253077784312,17.4968652131318,20.2815647134035,19.652630737156,29.8050205510454,24.6307298061501,26.175594198403,25.663764711775,60.8912526825187,18.6018669765783,14.6526215123099,10.5893433892542,15.1671926908357,13.3034618182063,16.5577002980963,23.4714477291508,19.7910664962804,32.0869593942675,35.5128657614229,23.618460513145,10.7443781013581,9.52808511863772,12.7361586884386,11.8227948909793,15.5753225230709,20.0668168329078,18.6302946755952,16.6889165707272,19.6884577398888,17.603772337305,19.7619322868207,18.516997340553,11.3529973135589,12.5058285334279,50.3341451625769,9.98936790183291,14.5336447707351,12.927115460034,35.7400748959552,46.7329363873443,30.403169628366,37.3000979597575,105.330141847426,21.4605700194485,33.1434170285167,24.6345070778941,24.9187114398347,24.6629707117431,26.4387864086395,27.675922509504,36.4760174611619,38.0639623546732,37.7965027578829,8.19920045914996,15.1629451892392,16.561159758151,25.5262052921709,9.4325923182592,11.0306105070008,23.113659691368,22.8698913535173,20.859748623468,18.4468964587572,18.2505095920973,28.4825775492975,21.9121127479525,24.1374824566357,25.6736546231591,27.1487404031352,21.4386002997983,21.4129234714713,14.0109206273124,23.4046283013692,23.6579784145937,22.8943789945545,24.7973637545214,22.8193874112756,24.468438907986,22.0844126597276,24.8782043106971,24.4654831637194,22.9508952399506,19.6399795080208,17.2020776280052,19.2083740632349,25.7815557196904,21.3812840836633,25.6565792604918,14.2392029424629,23.8610240614317,27.9332370262788,25.4413481651562,23.6032818457882,31.7658934799977
|short_description=p1@Atf6
}}

Revision as of 05:24, 5 August 2015

Short description:p1@Atf6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Atf6_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000027974, NM_001081304, uc007dmj.1_5end
EntrezGene:226641
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Atf6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G726.91
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I532.11
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I629.57
CD326+ enterocyte, pool1.CNhs13542.11848-124I323.89
CD326+ enterocyte, pool2.CNhs13197.11849-124I424.54
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I722.33
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I818.92
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E98.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E731.40
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F225.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E624.14
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F115.72
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E46.33
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.85
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A128.98
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A337.66
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A525.18
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A266.09
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A466.91
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A646.26
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A334.44
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H246.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I942.05
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D129.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D227.30
GP2+ M cell, pool1.CNhs13228.11845-124H918.95
GP2+ M cell, pool2.CNhs13231.11846-124I118.52
GP2+ M cell, pool3.CNhs13240.11847-124I220.25
Ileum epithelium, pool1.CNhs13199.10252-104B933.06
Ileum epithelium, pool2.CNhs13232.10253-104C136.80
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C825.94
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I310.16
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G617.84
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F512.71
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F68.81
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F712.05
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G826.79
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H128.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H330.36
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G921.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H223.22
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H423.79
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D825.31
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D928.39
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B340.20
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B75.48
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.76
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B89.01
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C314.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A264.26
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I910.88
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A110.42
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C125.73
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E131.23
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C533.00
Mouse Granule cells, donor1.CNhs12131.11713-123C38.90
Mouse Granule cells, donor2.CNhs12357.11731-123E315.87
Mouse Granule cells, donor3.CNhs12108.11636-122C713.94
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.07
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C712.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E722.74
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D214.92
Mouse Microglia, donor1.CNhs12629.11718-123C88.99
Mouse Microglia, donor2.CNhs12634.11736-123E87.68
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D58.50
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.83
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.78
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D510.38
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.78
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.95
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D331.93
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F323.11
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D720.74
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.74
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.80
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.81
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E515.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I619.41
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.90
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.09
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.61
Mouse Schwann, donor1.CNhs12507.11728-123D948.62
Mouse Schwann, donor2.CNhs12573.11746-123F930.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G362.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F748.18
Mouse hepatocyte, donor1.CNhs13078.11714-123C467.32
Mouse hepatocyte, donor3.CNhs12615.11637-122C854.51
Mouse hepatocyte, donor6.CNhs13090.11822-124F492.27
Mouse hepatocyte, donor8.CNhs13091.11824-124F695.88
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A742.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I730.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E318.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I820.49
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G622.68
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H129.52
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I825.48
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G114.07
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G212.41
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G317.19
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B652.52
accessory axillary lymph node, adult.CNhs10475.1063-29H9136.98
adrenal gland, adult.CNhs10508.49-24D732.51
adrenal gland, embryo E14.CNhs11038.406-44C511.62
adrenal gland, embryo E16.CNhs11004.1254-43D614.01
adrenal gland, embryo E17.CNhs11043.1263-45I113.84
adrenal gland, embryo E18.CNhs11026.1262-18F520.50
adrenal gland, neonate N00.CNhs11191.1311-23C124.22
adrenal gland, neonate N25.CNhs11223.1377-27I324.50
amnion, adult pregnant day17.5.CNhs10488.583-22A851.66
aorta, adult.CNhs10498.46-23H155.96
bone (os femoris), adult.CNhs10483.56-12G241.58
bone (os femoris), neonate N02.CNhs11227.1985-43F523.13
bone (os femoris), neonate N16.CNhs11225.1525-43A634.89
bone (os femoris), neonate N20.CNhs11195.1350-25C332.49
cecum, adult.CNhs10467.37-13H427.96
cerebellum, adult.CNhs10494.15-8B247.14
cerebellum, neonate N30.CNhs11135.1395-42I246.50
colon, adult.CNhs10468.36-18H748.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C761.23
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D132.99
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D452.99
corpora quadrigemina, adult.CNhs10501.16-22A425.16
corpus striatum, adult.CNhs10487.19-21D841.63
corpus striatum, neonate N00.CNhs11226.630-43F110.43
cortex, adult.CNhs10473.12-14D539.63
cortex, neonate N30.CNhs11107.1392-42F231.71
diencephalon, adult.CNhs10482.20-12F231.38
diencephalon, neonate N30.CNhs11201.1388-42B226.61
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B119.25
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A236.58
epididymis, adult.CNhs10490.58-23B243.47
eyeball, adult.CNhs10484.31-12G435.14
eyeball, embryo E12.CNhs11016.345-16C611.32
eyeball, embryo E14.CNhs10521.399-16E28.28
eyeball, embryo E15.CNhs10593.426-16C917.47
eyeball, embryo E17.CNhs11023.1261-18D421.55
eyeball, neonate N00.CNhs11207.633-15C621.43
eyeball, neonate N01.CNhs11140.1532-43E724.34
eyeball, neonate N02.CNhs11205.1551-44G819.12
eyeball, neonate N16.CNhs11188.777-19A233.11
forelimb, embryo E11.CNhs10596.335-25E29.48
forelimb, embryo E12.CNhs10600.359-14H218.53
forelimb, embryo E13.CNhs10589.384-1E220.23
forelimb, embryo E14.CNhs10577.413-26A812.71
forelimb, embryo E15.CNhs11007.437-20E717.24
forelimb, embryo E17.CNhs10598.1517-43C425.07
forelimb, embryo E18.CNhs11008.1520-43B521.61
gonad, embryo E13.CNhs11044.1564-45I615.52
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C847.75
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D244.52
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D536.66
heart, embryo E11.CNhs10586.331-24E932.73
heart, embryo E12.CNhs11015.353-12F525.56
heart, embryo E13.CNhs11013.376-3I926.29
heart, embryo E14.CNhs10597.403-26D432.43
heart, embryo E15.CNhs11017.431-16C833.25
heart, embryo E16.CNhs11021.457-17C632.70
heart, embryo E17.CNhs11025.479-18E534.42
heart, embryo E18.CNhs11030.1283-20G339.44
heart, neonate N00.CNhs11213.639-21E353.01
heart, neonate N03.CNhs11221.1349-25I253.65
heart, neonate N10.CNhs11118.749-24G164.03
heart, neonate N16.CNhs11209.782-15G187.55
heart, neonate N20.CNhs11127.821-26I673.98
heart, neonate N25.CNhs11196.1351-25D395.94
heart, neonate N30.CNhs11202.1390-42D2142.12
hippocampus, adult.CNhs10478.13-16E838.69
hippocampus, neonate N00.CNhs11228.627-43G112.35
intestinal mucosa, adult.CNhs10506.860-29I335.35
intestine, adult.CNhs10496.178-9A328.03
intestine, embryo E12.CNhs11019.1251-16I516.00
intestine, embryo E13.CNhs11010.381-16D515.56
intestine, embryo E15.CNhs10602.976-16D817.91
intestine, embryo E16.CNhs10585.463-22H425.61
intestine, embryo E17.CNhs10582.482-18D324.24
intestine, embryo E18.CNhs10526.1289-20F719.21
intestine, neonate N00.CNhs11126.644-26D127.52
intestine, neonate N01.CNhs11192.1322-23E923.55
intestine, neonate N06.CNhs11102.688-20B821.87
intestine, neonate N07.CNhs11095.720-20F223.48
intestine, neonate N10.CNhs11098.755-23A527.68
intestine, neonate N20.CNhs11187.827-18D141.35
intestine, neonate N25.CNhs11121.1352-25E330.04
intestine, neonate N30.CNhs11131.1384-42G129.47
kidney, embryo E14.CNhs10606.411-4I98.16
kidney, embryo E15.CNhs10997.434-16F817.71
kidney, embryo E16.CNhs10584.464-22A512.40
kidney, embryo E17.CNhs11028.483-18I215.48
kidney, embryo E18.CNhs11001.1288-20C713.96
kidney, neonate N00.CNhs11214.646-21G719.85
kidney, neonate N10.CNhs11206.758-6D524.79
kidney, neonate N20.CNhs11113.832-19I134.25
kidney, neonate N25.CNhs11122.1353-25F334.23
kidney, neonate N30.CNhs11203.1385-42H133.69
liver, adult pregnant day01.CNhs10466.508-5B293.98
liver, embryo E12.CNhs10601.355-15F828.86
liver, embryo E13.CNhs10524.378-3H624.77
liver, embryo E14.CNhs10594.409-16E132.38
liver, embryo E15.CNhs10520.433-16D734.28
liver, embryo E16.CNhs10523.462-17F534.97
liver, embryo E17.CNhs10510.481-18A329.03
liver, embryo E18.CNhs10579.499-43G437.69
liver, neonate N00.CNhs11117.641-24F472.64
liver, neonate N03.CNhs11123.1345-25G240.09
liver, neonate N06.CNhs11101.684-20A833.07
liver, neonate N07.CNhs11103.716-20H248.75
liver, neonate N10.CNhs11115.751-24B943.69
liver, neonate N20.CNhs11220.823-25A361.12
liver, neonate N25.CNhs11198.1368-26H169.25
liver, neonate N30.CNhs11106.1382-42D196.01
lung, adult.CNhs10474.28-22B156.53
lung, embryo E12.CNhs10522.354-16G213.45
lung, embryo E14.CNhs10604.404-26F818.09
lung, embryo E15.CNhs11020.432-17C517.65
lung, embryo E16.CNhs10998.458-17B617.84
lung, embryo E17.CNhs10605.480-44A631.99
lung, embryo E18.CNhs10583.1287-20I637.13
lung, neonate N00.CNhs11224.640-42C636.88
lung, neonate N06.CNhs11212.683-20E536.41
lung, neonate N07.CNhs11111.715-19A339.86
lung, neonate N10.CNhs11219.750-23E634.12
lung, neonate N20.CNhs11109.822-18A450.80
lung, neonate N25.CNhs11119.1359-25C739.03
lung, neonate N30.CNhs11133.1394-42H249.18
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A154.28
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A142.42
mammary gland, adult lactating day02.CNhs10480.595-22B638.85
mammary gland, adult pregnant day19.CNhs10476.588-5H236.42
medulla oblongata, adult.CNhs10477.17-12C227.78
medulla oblongata, neonate N30.CNhs11200.1396-42A324.73
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C727.87
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C242.16
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E112.62
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E215.62
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E316.16
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D715.77
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D817.82
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D918.40
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D413.36
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D517.83
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D615.02
olfactory brain, adult.CNhs10489.18-22I939.52
ovary, adult.CNhs10507.91-2I735.06
ovary, embryo E18.CNhs11040.505-44H715.85
ovary, neonate N00.CNhs11217.1299-22I416.45
oviduct, adult pregnant day01.CNhs10500.988-6G632.99
pancreas, adult.CNhs10486.34-16E4258.85
pancreas, embryo E14.CNhs11012.405-44F416.27
pancreas, embryo E15.CNhs11042.1556-45F222.37
pancreas, embryo E16.CNhs11003.460-26E554.13
pancreas, embryo E17.CNhs10599.1558-45G355.81
pancreas, embryo E18.CNhs10580.1535-43I777.17
pancreas, neonate N00.CNhs11105.645-26G964.09
pancreas, neonate N01.CNhs11138.1531-43D765.07
pancreas, neonate N02.CNhs11139.1539-43D859.54
pancreas, neonate N16.CNhs11136.787-43B6111.56
pancreas, neonate N25.CNhs11094.1555-45E2131.77
pancreas, neonate N30.CNhs11182.1548-44H5133.04
pituitary gland, adult.CNhs10493.21-1G834.38
pituitary gland, embryo E12.CNhs11018.346-16E614.40
pituitary gland, embryo E13.CNhs11009.370-44C710.35
pituitary gland, embryo E14.CNhs11037.398-44A513.29
pituitary gland, embryo E15.CNhs10592.427-16B922.88
pituitary gland, embryo E16.CNhs11036.449-43F617.84
pituitary gland, embryo E17.CNhs11039.1265-44F517.94
pituitary gland, neonate N00.CNhs11190.1308-22E913.70
placenta, adult pregnant day10.CNhs10472.539-13I738.72
placenta, adult pregnant day17.CNhs10464.577-18G364.82
prostate, adult.CNhs10470.859-1F8202.89
skin, adult.CNhs10492.30-1C354.41
skin, neonate N00.CNhs11124.650-25G423.41
skin, neonate N03.CNhs11215.662-22H330.52
skin, neonate N06.CNhs11097.693-20I533.90
skin, neonate N10.CNhs11108.762-6C442.35
small intestine, neonate N16.CNhs11114.790-21I130.02
spinal cord, adult.CNhs10505.24-13C928.00
spleen, adult.CNhs10465.25-2G253.14
spleen, embryo E16.CNhs11035.461-43C121.26
spleen, embryo E18.CNhs11011.1271-21F227.96
spleen, neonate N10.CNhs11116.752-24D128.44
spleen, neonate N20.CNhs11112.824-19H134.99
spleen, neonate N25.CNhs11099.1354-25G331.11
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C631.45
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C933.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D333.31
stomach, adult.CNhs10503.33-1H614.32
stomach, embryo E12.CNhs10588.356-43E316.77
stomach, embryo E15.CNhs10603.1252-16G819.93
stomach, embryo E16.CNhs11022.459-17D417.50
stomach, embryo E17.CNhs11006.1035-18D520.28
stomach, embryo E18.CNhs10999.1286-20C619.65
stomach, neonate N03.CNhs11193.1340-24B829.81
stomach, neonate N07.CNhs11210.718-18A924.63
stomach, neonate N25.CNhs11104.1355-25E426.18
stomach, neonate N30.CNhs11134.1386-42I125.66
submandibular gland, adult.CNhs10469.59-29C160.89
testis, adult.CNhs10504.57-7G518.60
testis, embryo E13.CNhs11031.389-23F514.65
testis, embryo E15.CNhs11034.443-27C510.59
testis, embryo E16.CNhs11033.470-26G515.17
testis, embryo E17.CNhs11029.486-18I513.30
testis, embryo E18.CNhs11027.503-18G516.56
testis, neonate N00.CNhs11189.1300-22B723.47
testis, neonate N07.CNhs11222.726-26I419.79
testis, neonate N10.CNhs11204.763-44D932.09
testis, neonate N20.CNhs11110.839-18H335.51
testis, neonate N30.CNhs11130.1391-42E223.62
thymus, adult.CNhs10471.38-12B510.74
thymus, embryo E14.CNhs11041.402-44I49.53
thymus, embryo E15.CNhs11005.430-45I212.74
thymus, embryo E16.CNhs11002.456-26C511.82
thymus, embryo E17.CNhs10581.478-18C115.58
thymus, embryo E18.CNhs10595.1273-19G420.07
thymus, neonate N02.CNhs11181.1541-43F818.63
thymus, neonate N03.CNhs11137.2104-43C716.69
thymus, neonate N06.CNhs11197.681-26C419.69
thymus, neonate N07.CNhs11211.713-19D317.60
thymus, neonate N10.CNhs11194.748-24E419.76
thymus, neonate N20.CNhs11186.820-7A218.52
thymus, neonate N25.CNhs11125.1362-25G711.35
thymus, neonate N30.CNhs11132.1393-42G212.51
tongue, adult.CNhs10499.32-1B450.33
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H39.99
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F714.53
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G512.93
urinary bladder, adult.CNhs10481.879-12E435.74
uterus, adult pregnant day19.CNhs10497.590-15F546.73
uterus, adult.CNhs10509.92-27E530.40
vagina, adult.CNhs10502.89-27D537.30
vesicular gland, adult.CNhs10491.51-27F8105.33
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A121.46
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A233.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A324.63
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D724.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A424.66
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A526.44
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A627.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A736.48
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A838.06
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A937.80
whole body, embryo E11.CNhs11014.324-5I88.20
whole body, embryo E12.CNhs10587.857-27C915.16
whole body, embryo E13.CNhs10512.372-23H216.56
whole body, embryo E14.5.CNhs10578.420-27D225.53
whole body, embryo E14.CNhs10519.395-14B19.43
whole body, embryo E16.CNhs10514.453-14F211.03
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G523.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G522.87
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G520.86
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G518.45
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G518.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G528.48
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G521.91
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G524.14
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G525.67
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G527.15
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G521.44
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G521.41
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G514.01
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G523.40
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G523.66
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G522.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G524.80
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G522.82
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G524.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G522.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G524.88
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G524.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G522.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G519.64
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G517.20
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G519.21
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G525.78
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G521.38
whole body, embryo E17.5.CNhs10513.490-9F925.66
whole body, embryo E17.CNhs10517.475-3I514.24
whole body, embryo E18.CNhs10516.493-3B323.86
whole body, neonate N00.CNhs10525.657-19C227.93
whole body, neonate N01.CNhs10576.659-23C625.44
whole body, neonate N06.CNhs10515.692-21D123.60
whole body, neonate N10.CNhs10518.761-6B431.77





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
epithelial tube9.50e-1447
adult organism6.73e-1251
trunk6.07e-1090
exocrine gland1.15e-0925
exocrine system1.15e-0925
liver1.17e-0822
epithelial sac1.17e-0822
digestive gland1.17e-0822
epithelium of foregut-midgut junction1.17e-0822
anatomical boundary1.17e-0822
hepatobiliary system1.17e-0822
foregut-midgut junction1.17e-0822
hepatic diverticulum1.17e-0822
liver primordium1.17e-0822
septum transversum1.17e-0822
liver bud1.17e-0822
digestive tract diverticulum1.52e-0823
sac1.52e-0823
trunk region element1.77e-0879
trunk mesenchyme9.22e-0845
splanchnic layer of lateral plate mesoderm2.10e-0733
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