FFCP PHASE1:Mm9::chr6:128598978..128598983,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:128598978..128598983,+
|short_description=p@chr6:128598978..128598983,+
|description=CAGE_peak_at_chr6:128598978..128598983,+
|association_with_transcript=...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=448 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:128598978..128598983,+ | |||
|description=CAGE_peak_at_chr6:128598978..128598983,+ | |||
|id=chr6:128598978..128598983,+ | |||
|ontology_enrichment_celltype=CL:0000239!8.82e-24!6;CL:0000677!8.82e-24!6;CL:0000212!8.82e-24!6;CL:0000584!8.82e-24!6;CL:0002563!6.99e-21!9;CL:0002251!6.99e-21!9;CL:0000075!2.56e-20!7;CL:0000066!2.13e-14!25;CL:0000473!7.86e-13!3;CL:0000627!7.86e-13!3;CL:0000682!7.86e-13!3;CL:0002076!3.29e-12!15;CL:0000223!6.01e-09!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.30e-30,6;CL:0000677,2.30e-30,6;CL:0000584,2.30e-30,6;CL:0000075,4.68e-26,7;CL:0000682,2.56e-22,3;CL:0002563,2.65e-20,9;CL:0002251,2.65e-20,9;CL:0000066,4.78e-18,25;CL:0002076,3.24e-12,15;CL:0000473,6.17e-10,7;CL:0000223,3.64e-09,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.00e-36!15;UBERON:0001242!1.00e-29!13;UBERON:0000060!1.00e-29!13;UBERON:0001262!1.00e-29!13;UBERON:0004786!1.00e-29!13;UBERON:0004923!3.56e-22!24;UBERON:0003350!6.99e-21!9;UBERON:0004808!6.99e-21!9;UBERON:0001277!6.99e-21!9;UBERON:0000160!6.31e-18!43;UBERON:0000485!6.07e-17!11;UBERON:0005409!3.49e-14!59;UBERON:0000331!1.49e-13!3;UBERON:0002116!1.49e-13!3;UBERON:0001204!1.49e-13!3;UBERON:0001168!1.49e-13!3;UBERON:0001962!9.43e-09!2;UBERON:0001961!9.43e-09!2;UBERON:0001744!9.43e-09!2;UBERON:0001007!9.46e-07!128;UBERON:0001555!9.46e-07!128;UBERON:0007026!9.46e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.08e-39,15;UBERON:0001242,6.20e-36,13;UBERON:0001262,6.20e-36,13;UBERON:0004786,6.20e-36,13;UBERON:0004923,3.50e-24,24;UBERON:0000331,1.19e-23,3;UBERON:0002116,1.19e-23,3;UBERON:0001204,1.19e-23,3;UBERON:0001168,1.19e-23,3;UBERON:0003350,2.65e-20,9;UBERON:0004808,2.65e-20,9;UBERON:0001277,2.65e-20,9;UBERON:0002108,6.52e-18,4;UBERON:0000485,1.24e-16,11;UBERON:0000160,8.70e-15,31;UBERON:0005409,1.53e-09,47;UBERON:0003199,2.89e-08,1 | |||
|phase1_expression=0,1.39590163055744,5.0049916332849,6.95667686005709,6.51164448930251,0.33575854382378,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799962113967033,1.14704640533585,2.29692785646008,3.87685796543167,1.939241094173,12.9215925230334,9.8291750606373,9.3126814475228,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528901133327089,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.39590163055744,5.0049916332849,6.95667686005709,6.51164448930251,0.33575854382378,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799962113967033,1.14704640533585,2.29692785646008,3.87685796543167,1.939241094173,12.9215925230334,9.8291750606373,9.3126814475228,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528901133327089,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:128598978..128598983,+ | |||
}} | }} |
Latest revision as of 05:43, 5 August 2015
Short description: | p@chr6:128598978..128598983, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:128598978..128598983, + |
Coexpression cluster: | MCL_coexpression_mm9:448 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.30e-30 | 6 |
gut absorptive cell | 2.30e-30 | 6 |
enterocyte | 2.30e-30 | 6 |
columnar/cuboidal epithelial cell | 4.68e-26 | 7 |
M cell of gut | 2.56e-22 | 3 |
intestinal epithelial cell | 2.65e-20 | 9 |
epithelial cell of alimentary canal | 2.65e-20 | 9 |
epithelial cell | 4.78e-18 | 25 |
endo-epithelial cell | 3.24e-12 | 15 |
defensive cell | 6.17e-10 | 7 |
endodermal cell | 3.64e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 5.08e-39 | 15 |
intestinal mucosa | 6.20e-36 | 13 |
wall of intestine | 6.20e-36 | 13 |
gastrointestinal system mucosa | 6.20e-36 | 13 |
organ component layer | 3.50e-24 | 24 |
ileal mucosa | 1.19e-23 | 3 |
ileum | 1.19e-23 | 3 |
mucosa of small intestine | 1.19e-23 | 3 |
wall of small intestine | 1.19e-23 | 3 |
epithelium of mucosa | 2.65e-20 | 9 |
gastrointestinal system epithelium | 2.65e-20 | 9 |
intestinal epithelium | 2.65e-20 | 9 |
small intestine | 6.52e-18 | 4 |
simple columnar epithelium | 1.24e-16 | 11 |
intestine | 8.70e-15 | 31 |
gastrointestinal system | 1.53e-09 | 47 |
egg chamber | 2.89e-08 | 1 |