FFCP PHASE1:Mm9::chr7:51170510..51170517,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=109 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:51170510..51170517,+ | |||
|description=CAGE_peak_at_chr7:51170510..51170517,+ | |description=CAGE_peak_at_chr7:51170510..51170517,+ | ||
|id=chr7:51170510..51170517,+ | |id=chr7:51170510..51170517,+ | ||
|ontology_enrichment_celltype=CL:0002250!1.24e-13!3 | |ontology_enrichment_celltype=CL:0002250!1.24e-13!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002250,4.15e-39,3;CL:0002563,6.62e-14,9;CL:0002251,6.62e-14,9;CL:0002076,8.43e-09,15;CL:0000223,7.26e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006562!7.48e-19!24;UBERON:0001557!7.48e-19!24;UBERON:0001042!7.48e-19!24;UBERON:0008814!7.48e-19!24;UBERON:0009145!7.48e-19!24;UBERON:0000072!1.48e-16!27;UBERON:0002370!3.84e-16!23;UBERON:0000974!3.84e-16!23;UBERON:0004807!3.84e-16!23;UBERON:0005058!3.84e-16!23;UBERON:0003351!3.84e-16!23;UBERON:0009113!3.84e-16!23;UBERON:0003295!3.84e-16!23;UBERON:0009722!3.84e-16!23;UBERON:0005562!3.84e-16!23;UBERON:0007690!3.84e-16!23;UBERON:0003408!2.10e-15!24;UBERON:0000065!1.67e-14!41;UBERON:0001004!4.18e-14!42;UBERON:0004177!1.78e-12!29;UBERON:0000063!2.35e-12!35;UBERON:0005911!9.39e-11!69;UBERON:0003929!1.88e-10!55;UBERON:0004921!6.91e-10!126;UBERON:0004185!6.91e-10!126;UBERON:0001007!1.11e-09!128;UBERON:0001555!1.11e-09!128;UBERON:0007026!1.11e-09!128;UBERON:0004119!1.77e-09!130;UBERON:0000925!1.77e-09!130;UBERON:0006595!1.77e-09!130;UBERON:0000077!3.03e-09!97;UBERON:0001041!1.67e-08!92;UBERON:0000490!2.50e-08!66;UBERON:0002390!1.78e-07!45;UBERON:0003061!1.78e-07!45;UBERON:0002193!6.56e-07!48 | |ontology_enrichment_uberon=UBERON:0006562!7.48e-19!24;UBERON:0001557!7.48e-19!24;UBERON:0001042!7.48e-19!24;UBERON:0008814!7.48e-19!24;UBERON:0009145!7.48e-19!24;UBERON:0000072!1.48e-16!27;UBERON:0002370!3.84e-16!23;UBERON:0000974!3.84e-16!23;UBERON:0004807!3.84e-16!23;UBERON:0005058!3.84e-16!23;UBERON:0003351!3.84e-16!23;UBERON:0009113!3.84e-16!23;UBERON:0003295!3.84e-16!23;UBERON:0009722!3.84e-16!23;UBERON:0005562!3.84e-16!23;UBERON:0007690!3.84e-16!23;UBERON:0003408!2.10e-15!24;UBERON:0000065!1.67e-14!41;UBERON:0001004!4.18e-14!42;UBERON:0004177!1.78e-12!29;UBERON:0000063!2.35e-12!35;UBERON:0005911!9.39e-11!69;UBERON:0003929!1.88e-10!55;UBERON:0004921!6.91e-10!126;UBERON:0004185!6.91e-10!126;UBERON:0001007!1.11e-09!128;UBERON:0001555!1.11e-09!128;UBERON:0007026!1.11e-09!128;UBERON:0004119!1.77e-09!130;UBERON:0000925!1.77e-09!130;UBERON:0006595!1.77e-09!130;UBERON:0000077!3.03e-09!97;UBERON:0001041!1.67e-08!92;UBERON:0000490!2.50e-08!66;UBERON:0002390!1.78e-07!45;UBERON:0003061!1.78e-07!45;UBERON:0002193!6.56e-07!48 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000996,2.87e-30,1;UBERON:0003350,6.62e-14,9;UBERON:0004808,6.62e-14,9;UBERON:0001277,6.62e-14,9;UBERON:0000485,1.36e-11,11;UBERON:0000162,4.56e-11,3;UBERON:0001353,4.56e-11,3;UBERON:0000163,4.56e-11,3;UBERON:0006866,4.56e-11,3;UBERON:0001046,4.56e-11,3;UBERON:0000164,4.56e-11,3;UBERON:0000931,4.56e-11,3;UBERON:0001242,5.52e-10,13;UBERON:0001262,5.52e-10,13;UBERON:0004786,5.52e-10,13;UBERON:0000344,8.43e-09,15;UBERON:0000161,3.64e-07,5;UBERON:0003975,3.64e-07,5;UBERON:0004122,3.64e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1554064790051,0.498703936075477,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418176592028937,0.655087691238533,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0,0,0,0.716106782669926,0.596044064343795,0.600977247599844,0.147689527174577,0.605798699688886,0.15241361331,0,0.292373642219257,0.192423683280659,0.350630706544707,0.906921534460845,0,0,0,0,0,0,5.35920947697665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1554064790051,0.498703936075477,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418176592028937,0.655087691238533,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0,0,0,0.716106782669926,0.596044064343795,0.600977247599844,0.147689527174577,0.605798699688886,0.15241361331,0,0.292373642219257,0.192423683280659,0.350630706544707,0.906921534460845,0,0,0,0,0,0,5.35920947697665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr7:51170510..51170517,+ | |short_description=p@chr7:51170510..51170517,+ | ||
}} | }} |
Latest revision as of 05:49, 5 August 2015
Short description: | p@chr7:51170510..51170517, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:51170510..51170517, + |
Coexpression cluster: | MCL_coexpression_mm9:109 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 4.15e-39 | 3 |
intestinal epithelial cell | 6.62e-14 | 9 |
epithelial cell of alimentary canal | 6.62e-14 | 9 |
endo-epithelial cell | 8.43e-09 | 15 |
endodermal cell | 7.26e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
vagina | 2.87e-30 | 1 |
epithelium of mucosa | 6.62e-14 | 9 |
gastrointestinal system epithelium | 6.62e-14 | 9 |
intestinal epithelium | 6.62e-14 | 9 |
simple columnar epithelium | 1.36e-11 | 11 |
cloaca | 4.56e-11 | 3 |
anal region | 4.56e-11 | 3 |
embryonic cloaca | 4.56e-11 | 3 |
terminal part of digestive tract | 4.56e-11 | 3 |
hindgut | 4.56e-11 | 3 |
primitive urogenital sinus | 4.56e-11 | 3 |
proctodeum | 4.56e-11 | 3 |
intestinal mucosa | 5.52e-10 | 13 |
wall of intestine | 5.52e-10 | 13 |
gastrointestinal system mucosa | 5.52e-10 | 13 |
mucosa | 8.43e-09 | 15 |
orifice | 3.64e-07 | 5 |
internal female genitalia | 3.64e-07 | 5 |
genitourinary system | 3.64e-07 | 5 |