FFCP PHASE1:Mm9::chr17:72942954..72942965,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:72942954..72942965,-
|short_description=p@chr17:72942954..72942965,-
|description=CAGE_peak_at_chr17:72942954..72942965,-
|association_with_transcript=NA
...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=107 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:72942954..72942965,- | |||
|description=CAGE_peak_at_chr17:72942954..72942965,- | |||
|id=chr17:72942954..72942965,- | |||
|ontology_enrichment_celltype=CL:0000107!2.53e-10!9;CL:0000540!4.38e-07!33;CL:0000047!4.38e-07!33;CL:0000031!4.38e-07!33;CL:0000404!4.38e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,8.79e-35,9;CL:0000540,9.54e-12,33;CL:0000047,9.54e-12,33;CL:0000031,9.54e-12,33;CL:0000404,9.54e-12,33;CL:0000393,8.09e-10,39;CL:0000211,8.09e-10,39;CL:0002319,7.88e-09,43;CL:0000221,1.31e-08,44;CL:0000133,1.31e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.11e-15!73;UBERON:0005743!1.11e-15!73;UBERON:0000073!5.97e-15!75;UBERON:0001016!5.97e-15!75;UBERON:0004121!1.08e-11!102;UBERON:0000924!1.08e-11!102;UBERON:0006601!1.08e-11!102;UBERON:0002410!2.53e-10!9;UBERON:0000955!1.03e-09!50;UBERON:0006238!1.03e-09!50;UBERON:0002346!3.18e-09!71;UBERON:0003075!3.18e-09!71;UBERON:0007284!3.18e-09!71;UBERON:0002616!5.79e-09!49;UBERON:0000033!1.55e-08!63;UBERON:0001049!2.68e-08!52;UBERON:0005068!2.68e-08!52;UBERON:0006241!2.68e-08!52;UBERON:0007135!2.68e-08!52;UBERON:0003080!3.93e-08!40;UBERON:0000010!4.96e-08!11;UBERON:0003056!4.98e-08!49;UBERON:0001894!1.13e-07!10;UBERON:0006222!1.13e-07!10;UBERON:0002780!2.39e-07!39;UBERON:0001890!2.39e-07!39;UBERON:0006240!2.39e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,8.79e-35,9;UBERON:0000010,2.17e-28,11;UBERON:0000011,1.65e-20,3;UBERON:0000013,8.33e-20,3;UBERON:0001017,2.21e-13,73;UBERON:0001016,5.47e-13,75;UBERON:0004121,1.10e-11,95;UBERON:0000924,1.10e-11,95;UBERON:0006601,1.10e-11,95;UBERON:0002259,1.33e-07,1;UBERON:0002314,1.33e-07,1;UBERON:0004061,1.33e-07,1;UBERON:0006777,1.33e-07,1;UBERON:0005882,1.33e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,1.10115880999389,0.255374676170375,0.153606533256243,0.131886287730194,0.0914876436024097,0,0,0,0,0,0.427115042397309,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9472783122627,0.457500602818626,0,0.173824320192276,0.255715457330331,1.45451631191692,1.1356888414743,0,0,0,0,0,0,0,0.30140963567143,0,0.12811372028485,0,1.03481348295606,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0.232533944750408,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0.464473343720877,0,0,0,0,0,0.494096864172033,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0,0,0,0.94652465824877,0,2.80050417052639,3.58453196928828,7.5751549188014,3.39691836946599,1.21443210502468,6.13737301613755,2.76701444562566,0.642642632843614,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,3.06395645178409,0.36012218806262,0,0.214337035031592,0.886701168211368,0.535106452806212,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.216010681643603,0,0.218362563746178,0.269728692769641,0.330613822901344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0,1.12950368523413,0.460325236507177,0,0.515559547031063,0.685082519770642,0,0,0,0.453142408984205,0,0,0,0.341467211508268,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.17230640686684,0.476293691283074,0.231768651889711,0,0,0,0.342869252385415,0,0.238436189947321,0,0.0941093804153306,0,0,0,0.135804113845862,0.561142271657738,0.118635018124174,0.197008964751127,0,0.154936841185966,0,0.499621155875892,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,1.10115880999389,0.255374676170375,0.153606533256243,0.131886287730194,0.0914876436024097,0,0,0,0,0,0.427115042397309,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9472783122627,0.457500602818626,0,0.173824320192276,0.255715457330331,1.45451631191692,1.1356888414743,0,0,0,0,0,0,0,0.30140963567143,0,0.12811372028485,0,1.03481348295606,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0.232533944750408,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0.464473343720877,0,0,0,0,0,0.494096864172033,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0,0,0,0.94652465824877,0,2.80050417052639,3.58453196928828,7.5751549188014,3.39691836946599,1.21443210502468,6.13737301613755,2.76701444562566,0.642642632843614,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,3.06395645178409,0.36012218806262,0,0.214337035031592,0.886701168211368,0.535106452806212,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.216010681643603,0,0.218362563746178,0.269728692769641,0.330613822901344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0,1.12950368523413,0.460325236507177,0,0.515559547031063,0.685082519770642,0,0,0,0.453142408984205,0,0,0,0.341467211508268,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.17230640686684,0.476293691283074,0.231768651889711,0,0,0,0.342869252385415,0,0.238436189947321,0,0.0941093804153306,0,0,0,0.135804113845862,0.561142271657738,0.118635018124174,0.197008964751127,0,0.154936841185966,0,0.499621155875892,0,0,0,0,0 | ||
|short_description=p@chr17:72942954..72942965,- | |||
}} | }} |
Latest revision as of 07:40, 5 August 2015
Short description: | p@chr17:72942954..72942965, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:72942954..72942965, - |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 8.79e-35 | 9 |
neuron | 9.54e-12 | 33 |
neuronal stem cell | 9.54e-12 | 33 |
neuroblast | 9.54e-12 | 33 |
electrically signaling cell | 9.54e-12 | 33 |
electrically responsive cell | 8.09e-10 | 39 |
electrically active cell | 8.09e-10 | 39 |
neural cell | 7.88e-09 | 43 |
ectodermal cell | 1.31e-08 | 44 |
neurectodermal cell | 1.31e-08 | 44 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 8.79e-35 | 9 |
peripheral nervous system | 2.17e-28 | 11 |
parasympathetic nervous system | 1.65e-20 | 3 |
sympathetic nervous system | 8.33e-20 | 3 |
central nervous system | 2.21e-13 | 73 |
nervous system | 5.47e-13 | 75 |
ectoderm-derived structure | 1.10e-11 | 95 |
ectoderm | 1.10e-11 | 95 |
presumptive ectoderm | 1.10e-11 | 95 |
corpora quadrigemina | 1.33e-07 | 1 |
midbrain tectum | 1.33e-07 | 1 |
neural tube mantle layer | 1.33e-07 | 1 |
tectal plate | 1.33e-07 | 1 |
neural tube alar plate | 1.33e-07 | 1 |