FFCP PHASE1:Mm9::chr7:52494745..52494757,-: Difference between revisions
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{{FFCP|EntrezGene=12493|HGNC=|MCL_coexpression_id=36|UniProt=Q3U429|association_with_transcript=-260bp_to_ENSMUST00000033063_5end|description=CAGE_peak_8_at_Cd37_5end|id=chr7:52494745..52494757,-|ontology_enrichment_celltype=CL:0000838!6.46e-17!12;CL:0000084!1.61e-15!11;CL:0000827!1.61e-15!11;CL:0000542!2.37e-15!13;CL:0000051!2.37e-15!13;CL:0002031!4.53e-14!25;CL:0000791!9.04e-13!9;CL:0000789!9.04e-13!9;CL:0002420!9.04e-13!9;CL:0002419!9.04e-13!9;CL:0000790!9.04e-13!9;CL:0000624!2.48e-11!8;CL:0000738!5.91e-11!17;CL:0002087!5.91e-11!17;CL:0000988!6.28e-10!32;CL:0002032!6.28e-10!32;CL:0000037!6.28e-10!32;CL:0000566!6.28e-10!32;CL:0000837!6.28e-10!32;CL:0000893!1.69e-08!6;CL:0002489!1.69e-08!6;CL:0000898!1.69e-08!6;CL:0000809!1.69e-08!6;CL:0000810!1.69e-08!6;CL:0000895!1.69e-08!6;CL:0000808!1.69e-08!6;CL:0000894!1.69e-08!6;CL:0000806!1.69e-08!6;CL:0000807!1.69e-08!6;CL:0000805!1.69e-08!6;CL:0002425!1.69e-08!6;CL:0002436!1.69e-08!6;CL:0002427!1.69e-08!6;CL:0002428!1.69e-08!6;CL:0002429!1.69e-08!6;CL:0002433!1.69e-08!6;CL:0002431!1.69e-08!6;CL:0002432!1.69e-08!6|ontology_enrichment_celltype_v019_2=CL:0000838,6.90e-24,12;CL:0000542,5.55e-22,13;CL:0000051,5.55e-22,13;CL:0000084,3.43e-20,11;CL:0000827,3.43e-20,11;CL:0002031,5.61e-17,25;CL:0000738,1.35e-16,17;CL:0002087,1.35e-16,17;CL:0000791,3.20e-13,9;CL:0000789,3.20e-13,9;CL:0002420,3.20e-13,9;CL:0002419,3.20e-13,9;CL:0000790,3.20e-13,9;CL:0000988,5.90e-13,32;CL:0002032,5.90e-13,32;CL:0000037,5.90e-13,32;CL:0000837,5.90e-13,32;CL:0000624,7.12e-10,8;CL:0002320,1.42e-08,46;CL:0000134,1.42e-08,46;CL:0000034,1.55e-08,97;CL:0000219,4.36e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.90e-07,3;DOID:4045,1.90e-07,3|ontology_enrichment_uberon=UBERON:0004177!8.90e-27!29;UBERON:0002193!2.49e-24!48;UBERON:0002390!7.35e-23!45;UBERON:0003061!7.35e-23!45;UBERON:0002370!6.35e-20!23;UBERON:0000974!6.35e-20!23;UBERON:0004807!6.35e-20!23;UBERON:0005058!6.35e-20!23;UBERON:0003351!6.35e-20!23;UBERON:0009113!6.35e-20!23;UBERON:0003295!6.35e-20!23;UBERON:0009722!6.35e-20!23;UBERON:0005562!6.35e-20!23;UBERON:0007690!6.35e-20!23;UBERON:0006562!7.50e-19!24;UBERON:0003408!7.50e-19!24;UBERON:0001557!7.50e-19!24;UBERON:0001042!7.50e-19!24;UBERON:0008814!7.50e-19!24;UBERON:0009145!7.50e-19!24;UBERON:0000072!4.05e-16!27;UBERON:0002405!6.46e-16!70;UBERON:0005057!2.45e-14!51;UBERON:0000065!4.28e-12!41;UBERON:0001004!1.17e-11!42;UBERON:0000063!3.61e-11!35;UBERON:0003081!9.24e-11!88;UBERON:0002106!4.46e-08!6;UBERON:0004457!4.46e-08!6;UBERON:0000042!4.46e-08!6;UBERON:0004854!4.46e-08!6;UBERON:0009034!4.46e-08!6;UBERON:0002095!4.46e-08!6;UBERON:0004782!4.46e-08!6;UBERON:0003281!4.46e-08!6;UBERON:0009664!4.46e-08!6;UBERON:0002296!4.46e-08!6;UBERON:0005602!4.46e-08!6;UBERON:0001179!4.46e-08!6;UBERON:0006293!4.46e-08!6;UBERON:0001041!3.57e-07!92;UBERON:0000490!3.95e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.42e-08,46|phase1_expression=0,0,0,0,0,0,0,2.7115897922731,0.703943610758334,0.468129052643987,0.171217968225505,0.0797721589953364,3.59521532855532,4.19617931611188,0.333109761815663,0.607425802169478,0,0.630924330716475,1.09691546884591,1.27316895539409,0.0850432901510698,1.88652807281682,1.04479915655574,0.159992422793407,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,3.76678467663217,0.7813353445238,2.61761871986899,3.52938892818609,4.78131839470912,1.94204141212461,0,0,0,0,0,0,0,0,0,1.51004345451963,1.45072428402269,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33044095282455,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0.206386867963223,0.370389054739423,0.565105371014073,0.820165366326151,0.457556346413045,3.22959016988325,3.07893195112048,1.65839968565309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0.405450430580328,0.102710957164827,0.389762468933385,0.358053391334963,0.596044064343795,0.600977247599844,0.443068581523732,0.908698049533329,0.381034033274999,0.100826185136841,0.974578807397524,0.288635524920988,0.701261413089414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0.220591419119515,0|short_description=p8@Cd37}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12493 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3U429 | |||
|association_with_transcript=-260bp_to_ENSMUST00000033063_5end | |||
|cluster_id=chr7:52494745..52494757,- | |||
|description=CAGE_peak_8_at_Cd37_5end | |||
|id=chr7:52494745..52494757,- | |||
|ontology_enrichment_celltype=CL:0000838!6.46e-17!12;CL:0000084!1.61e-15!11;CL:0000827!1.61e-15!11;CL:0000542!2.37e-15!13;CL:0000051!2.37e-15!13;CL:0002031!4.53e-14!25;CL:0000791!9.04e-13!9;CL:0000789!9.04e-13!9;CL:0002420!9.04e-13!9;CL:0002419!9.04e-13!9;CL:0000790!9.04e-13!9;CL:0000624!2.48e-11!8;CL:0000738!5.91e-11!17;CL:0002087!5.91e-11!17;CL:0000988!6.28e-10!32;CL:0002032!6.28e-10!32;CL:0000037!6.28e-10!32;CL:0000566!6.28e-10!32;CL:0000837!6.28e-10!32;CL:0000893!1.69e-08!6;CL:0002489!1.69e-08!6;CL:0000898!1.69e-08!6;CL:0000809!1.69e-08!6;CL:0000810!1.69e-08!6;CL:0000895!1.69e-08!6;CL:0000808!1.69e-08!6;CL:0000894!1.69e-08!6;CL:0000806!1.69e-08!6;CL:0000807!1.69e-08!6;CL:0000805!1.69e-08!6;CL:0002425!1.69e-08!6;CL:0002436!1.69e-08!6;CL:0002427!1.69e-08!6;CL:0002428!1.69e-08!6;CL:0002429!1.69e-08!6;CL:0002433!1.69e-08!6;CL:0002431!1.69e-08!6;CL:0002432!1.69e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,6.90e-24,12;CL:0000542,5.55e-22,13;CL:0000051,5.55e-22,13;CL:0000084,3.43e-20,11;CL:0000827,3.43e-20,11;CL:0002031,5.61e-17,25;CL:0000738,1.35e-16,17;CL:0002087,1.35e-16,17;CL:0000791,3.20e-13,9;CL:0000789,3.20e-13,9;CL:0002420,3.20e-13,9;CL:0002419,3.20e-13,9;CL:0000790,3.20e-13,9;CL:0000988,5.90e-13,32;CL:0002032,5.90e-13,32;CL:0000037,5.90e-13,32;CL:0000837,5.90e-13,32;CL:0000624,7.12e-10,8;CL:0002320,1.42e-08,46;CL:0000134,1.42e-08,46;CL:0000034,1.55e-08,97;CL:0000219,4.36e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.90e-07,3;DOID:4045,1.90e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0004177!8.90e-27!29;UBERON:0002193!2.49e-24!48;UBERON:0002390!7.35e-23!45;UBERON:0003061!7.35e-23!45;UBERON:0002370!6.35e-20!23;UBERON:0000974!6.35e-20!23;UBERON:0004807!6.35e-20!23;UBERON:0005058!6.35e-20!23;UBERON:0003351!6.35e-20!23;UBERON:0009113!6.35e-20!23;UBERON:0003295!6.35e-20!23;UBERON:0009722!6.35e-20!23;UBERON:0005562!6.35e-20!23;UBERON:0007690!6.35e-20!23;UBERON:0006562!7.50e-19!24;UBERON:0003408!7.50e-19!24;UBERON:0001557!7.50e-19!24;UBERON:0001042!7.50e-19!24;UBERON:0008814!7.50e-19!24;UBERON:0009145!7.50e-19!24;UBERON:0000072!4.05e-16!27;UBERON:0002405!6.46e-16!70;UBERON:0005057!2.45e-14!51;UBERON:0000065!4.28e-12!41;UBERON:0001004!1.17e-11!42;UBERON:0000063!3.61e-11!35;UBERON:0003081!9.24e-11!88;UBERON:0002106!4.46e-08!6;UBERON:0004457!4.46e-08!6;UBERON:0000042!4.46e-08!6;UBERON:0004854!4.46e-08!6;UBERON:0009034!4.46e-08!6;UBERON:0002095!4.46e-08!6;UBERON:0004782!4.46e-08!6;UBERON:0003281!4.46e-08!6;UBERON:0009664!4.46e-08!6;UBERON:0002296!4.46e-08!6;UBERON:0005602!4.46e-08!6;UBERON:0001179!4.46e-08!6;UBERON:0006293!4.46e-08!6;UBERON:0001041!3.57e-07!92;UBERON:0000490!3.95e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.42e-08,46 | |||
|phase1_expression=0,0,0,0,0,0,0,2.7115897922731,0.703943610758334,0.468129052643987,0.171217968225505,0.0797721589953364,3.59521532855532,4.19617931611188,0.333109761815663,0.607425802169478,0,0.630924330716475,1.09691546884591,1.27316895539409,0.0850432901510698,1.88652807281682,1.04479915655574,0.159992422793407,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,3.76678467663217,0.7813353445238,2.61761871986899,3.52938892818609,4.78131839470912,1.94204141212461,0,0,0,0,0,0,0,0,0,1.51004345451963,1.45072428402269,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33044095282455,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0.206386867963223,0.370389054739423,0.565105371014073,0.820165366326151,0.457556346413045,3.22959016988325,3.07893195112048,1.65839968565309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0.405450430580328,0.102710957164827,0.389762468933385,0.358053391334963,0.596044064343795,0.600977247599844,0.443068581523732,0.908698049533329,0.381034033274999,0.100826185136841,0.974578807397524,0.288635524920988,0.701261413089414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p8@Cd37 | |||
}} |
Revision as of 08:20, 5 August 2015
Short description: | p8@Cd37 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Cd37_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | -260bp_to_ENSMUST00000033063_5end |
EntrezGene: | 12493 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 6.90e-24 | 12 |
lymphocyte | 5.55e-22 | 13 |
common lymphoid progenitor | 5.55e-22 | 13 |
T cell | 3.43e-20 | 11 |
pro-T cell | 3.43e-20 | 11 |
hematopoietic lineage restricted progenitor cell | 5.61e-17 | 25 |
leukocyte | 1.35e-16 | 17 |
nongranular leukocyte | 1.35e-16 | 17 |
mature alpha-beta T cell | 3.20e-13 | 9 |
alpha-beta T cell | 3.20e-13 | 9 |
immature T cell | 3.20e-13 | 9 |
mature T cell | 3.20e-13 | 9 |
immature alpha-beta T cell | 3.20e-13 | 9 |
hematopoietic cell | 5.90e-13 | 32 |
hematopoietic oligopotent progenitor cell | 5.90e-13 | 32 |
hematopoietic stem cell | 5.90e-13 | 32 |
hematopoietic multipotent progenitor cell | 5.90e-13 | 32 |
CD4-positive, alpha-beta T cell | 7.12e-10 | 8 |
connective tissue cell | 1.42e-08 | 46 |
mesenchymal cell | 1.42e-08 | 46 |
stem cell | 1.55e-08 | 97 |
motile cell | 4.36e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.42e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.90e-07 | 3 |
muscle cancer | 1.90e-07 | 3 |