FFCP PHASE1:Mm9::chr12:83345629..83345660,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=48|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:83345629..83345660,+|id=chr12:83345629..83345660,+|ontology_enrichment_celltype=CL:0000049!2.39e-09!19;CL:0000988!4.24e-08!32;CL:0002032!4.24e-08!32;CL:0000037!4.24e-08!32;CL:0000566!4.24e-08!32;CL:0000837!4.24e-08!32;CL:0000553!1.00e-06!6;CL:0000556!1.00e-06!6|ontology_enrichment_celltype_v019_2=CL:0000553,1.80e-18,6;CL:0000556,1.80e-18,6;CL:0000049,5.14e-17,19;CL:0000839,3.01e-13,13;CL:0000988,5.25e-13,32;CL:0002032,5.25e-13,32;CL:0000037,5.25e-13,32;CL:0000837,5.25e-13,32;CL:0000050,2.02e-12,9;CL:0000763,9.22e-11,16;CL:0002031,9.85e-10,25;CL:0002320,7.86e-09,46;CL:0000134,7.86e-09,46;CL:0000945,1.56e-08,1;CL:0000236,1.56e-08,1;CL:0000826,1.56e-08,1;CL:0000219,2.07e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.16e-09!48;UBERON:0002390!3.29e-07!45;UBERON:0003061!3.29e-07!45|ontology_enrichment_uberon_v019_2=UBERON:0002465,1.16e-20,3;UBERON:0001962,2.68e-14,2;UBERON:0001961,2.68e-14,2;UBERON:0001744,2.68e-14,2;UBERON:0001474,4.79e-11,22;UBERON:0004765,4.79e-11,22;UBERON:0001434,4.79e-11,22;UBERON:0002371,9.22e-11,16;UBERON:0002193,1.24e-10,48;UBERON:0002405,1.24e-10,48;UBERON:0002384,7.86e-09,46;UBERON:0000029,4.80e-08,1;UBERON:0001097,4.80e-08,1;UBERON:0003968,4.80e-08,1;UBERON:0001467,4.80e-08,1;UBERON:0003199,7.68e-08,1;UBERON:0002204,1.70e-07,32|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0.171200729931206,0,0.333109761815663,1.01237633694913,0,3.15462165358238,2.19383093769182,2.12194825899015,0.17008658030214,0.397163804803541,0,1.91990907352088,1.14704640533585,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0.7813353445238,0.523523743973798,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,10.0669563634642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.8125651855302,0.148442139064825,0,0,0,0,0,0,0,0.433798070759735,2.65383165584962,0,0.441683036920787,0,0,0,0,0.255457055208591,1.1981512450592,0.599902730993408,1.01656181658452,0,0,0,0,0.255715457330331,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0.241177159752417,0,0,0.162135226775035,0,0,0.744281895337007,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0.315270288212382,0.664394068946325,0.637819074629948,0.655453258862952,0.863424909329478,0.289298117163023,0,3.26343410291226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.824850614862677,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0.291480836629851,0,0.854354403989263,0,0.370389054739423,1.50694765603753,0.136694227721025,0.915112692826091,0.509935289981566,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0.179026695667481,0,0,0,0,0.15241361331,0,0.194915761479505,0,0,0,0,0,0,0,0.187682475451182,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0.231867835620421|short_description=p@chr12:83345629..83345660,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=48 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:83345629..83345660,+ | |||
|description=CAGE_peak_at_chr12:83345629..83345660,+ | |||
|id=chr12:83345629..83345660,+ | |||
|ontology_enrichment_celltype=CL:0000049!2.39e-09!19;CL:0000988!4.24e-08!32;CL:0002032!4.24e-08!32;CL:0000037!4.24e-08!32;CL:0000566!4.24e-08!32;CL:0000837!4.24e-08!32;CL:0000553!1.00e-06!6;CL:0000556!1.00e-06!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.80e-18,6;CL:0000556,1.80e-18,6;CL:0000049,5.14e-17,19;CL:0000839,3.01e-13,13;CL:0000988,5.25e-13,32;CL:0002032,5.25e-13,32;CL:0000037,5.25e-13,32;CL:0000837,5.25e-13,32;CL:0000050,2.02e-12,9;CL:0000763,9.22e-11,16;CL:0002031,9.85e-10,25;CL:0002320,7.86e-09,46;CL:0000134,7.86e-09,46;CL:0000945,1.56e-08,1;CL:0000236,1.56e-08,1;CL:0000826,1.56e-08,1;CL:0000219,2.07e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.16e-09!48;UBERON:0002390!3.29e-07!45;UBERON:0003061!3.29e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,1.16e-20,3;UBERON:0001962,2.68e-14,2;UBERON:0001961,2.68e-14,2;UBERON:0001744,2.68e-14,2;UBERON:0001474,4.79e-11,22;UBERON:0004765,4.79e-11,22;UBERON:0001434,4.79e-11,22;UBERON:0002371,9.22e-11,16;UBERON:0002193,1.24e-10,48;UBERON:0002405,1.24e-10,48;UBERON:0002384,7.86e-09,46;UBERON:0000029,4.80e-08,1;UBERON:0001097,4.80e-08,1;UBERON:0003968,4.80e-08,1;UBERON:0001467,4.80e-08,1;UBERON:0003199,7.68e-08,1;UBERON:0002204,1.70e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0.171200729931206,0,0.333109761815663,1.01237633694913,0,3.15462165358238,2.19383093769182,2.12194825899015,0.17008658030214,0.397163804803541,0,1.91990907352088,1.14704640533585,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0.7813353445238,0.523523743973798,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,10.0669563634642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.8125651855302,0.148442139064825,0,0,0,0,0,0,0,0.433798070759735,2.65383165584962,0,0.441683036920787,0,0,0,0,0.255457055208591,1.1981512450592,0.599902730993408,1.01656181658452,0,0,0,0,0.255715457330331,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0.241177159752417,0,0,0.162135226775035,0,0,0.744281895337007,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0.315270288212382,0.664394068946325,0.637819074629948,0.655453258862952,0.863424909329478,0.289298117163023,0,3.26343410291226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.824850614862677,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0.291480836629851,0,0.854354403989263,0,0.370389054739423,1.50694765603753,0.136694227721025,0.915112692826091,0.509935289981566,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0.179026695667481,0,0,0,0,0.15241361331,0,0.194915761479505,0,0,0,0,0,0,0,0.187682475451182,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0.231867835620421 | |||
|short_description=p@chr12:83345629..83345660,+ | |||
}} |
Latest revision as of 08:36, 5 August 2015
Short description: | p@chr12:83345629..83345660, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:83345629..83345660, + |
Coexpression cluster: | MCL_coexpression_mm9:48 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.80e-18 | 6 |
megakaryocyte | 1.80e-18 | 6 |
common myeloid progenitor | 5.14e-17 | 19 |
myeloid lineage restricted progenitor cell | 3.01e-13 | 13 |
hematopoietic cell | 5.25e-13 | 32 |
hematopoietic oligopotent progenitor cell | 5.25e-13 | 32 |
hematopoietic stem cell | 5.25e-13 | 32 |
hematopoietic multipotent progenitor cell | 5.25e-13 | 32 |
megakaryocyte-erythroid progenitor cell | 2.02e-12 | 9 |
myeloid cell | 9.22e-11 | 16 |
hematopoietic lineage restricted progenitor cell | 9.85e-10 | 25 |
connective tissue cell | 7.86e-09 | 46 |
mesenchymal cell | 7.86e-09 | 46 |
lymphocyte of B lineage | 1.56e-08 | 1 |
B cell | 1.56e-08 | 1 |
pro-B cell | 1.56e-08 | 1 |
motile cell | 2.07e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 1.16e-20 | 3 |
gut-associated lymphoid tissue | 2.68e-14 | 2 |
mucosa-associated lymphoid tissue | 2.68e-14 | 2 |
lymphoid tissue | 2.68e-14 | 2 |
bone element | 4.79e-11 | 22 |
skeletal element | 4.79e-11 | 22 |
skeletal system | 4.79e-11 | 22 |
bone marrow | 9.22e-11 | 16 |
hemolymphoid system | 1.24e-10 | 48 |
immune system | 1.24e-10 | 48 |
connective tissue | 7.86e-09 | 46 |
lymph node | 4.80e-08 | 1 |
axillary lymph node | 4.80e-08 | 1 |
peripheral lymph node | 4.80e-08 | 1 |
shoulder | 4.80e-08 | 1 |
egg chamber | 7.68e-08 | 1 |
musculoskeletal system | 1.70e-07 | 32 |