FFCP PHASE1:Mm9::chr6:143895612..143895631,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=20678|HGNC=|MCL_coexpression_id=0|UniProt=B2KFM6,P35710,B2KFM7,Q3TVF9|association_with_transcript=0bp_to_ENSMUST00000111746,ENSMUST00000111748,ENSMUST00000144289,uc009eqj.1_5end|description=CAGE_peak_3_at_Sox5_5end|id=chr6:143895612..143895631,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003135!7.70e-15!15;UBERON:0003101!6.38e-14!16;UBERON:0000079!6.38e-14!16;UBERON:0003133!4.42e-13!24;UBERON:0001301!2.42e-12!3;UBERON:0006555!2.42e-12!3;UBERON:0005103!2.42e-12!3;UBERON:0000083!2.42e-12!3;UBERON:0009201!2.42e-12!3;UBERON:0004819!2.42e-12!3;UBERON:0006553!2.42e-12!3;UBERON:0003074!2.42e-12!3;UBERON:0003060!2.42e-12!3;UBERON:0005156!4.55e-12!26;UBERON:0000990!4.55e-12!26;UBERON:0000473!1.66e-10!14;UBERON:0001374!6.88e-10!1;UBERON:0001630!6.88e-10!1;UBERON:0004252!6.88e-10!1;UBERON:0003663!6.88e-10!1;UBERON:0001383!6.88e-10!1;UBERON:0005090!6.88e-10!1;UBERON:0003661!6.88e-10!1;UBERON:0000080!1.71e-09!4;UBERON:0005904!1.71e-09!4;UBERON:0006947!1.71e-09!4;UBERON:0002120!1.71e-09!4;UBERON:0004054!1.71e-09!4;UBERON:0004875!1.71e-09!4;UBERON:0004876!1.71e-09!4;UBERON:0005721!1.71e-09!4;UBERON:0005754!1.71e-09!4;UBERON:0007297!1.71e-09!4;UBERON:0004175!3.68e-09!9;UBERON:0004176!1.05e-08!17;UBERON:0009196!1.05e-08!17;UBERON:0009117!1.05e-08!17;UBERON:0000991!3.08e-08!18;UBERON:0005564!3.08e-08!18|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.54e-10,14;UBERON:0003135,1.51e-09,15;UBERON:0003101,5.40e-09,16;UBERON:0000079,5.40e-09,16;UBERON:0004176,1.66e-08,17;UBERON:0009196,1.66e-08,17;UBERON:0009117,1.66e-08,17;UBERON:0000991,4.53e-08,18;UBERON:0005564,4.53e-08,18|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,56.3837013701593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.05599912474307,0,0,0,0,0,0,0,0,0,0,8.90634261808668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,436.862027480247,0,0,0,0,0,0,0,0,7.73069186643219,201.621004380506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@Sox5}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20678 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:B2KFM6,uniprot:P35710,uniprot:B2KFM7,uniprot:Q3TVF9 | |||
|association_with_transcript=0bp_to_ENSMUST00000111746,ENSMUST00000111748,ENSMUST00000144289,uc009eqj.1_5end | |||
|cluster_id=chr6:143895612..143895631,- | |||
|description=CAGE_peak_3_at_Sox5_5end | |||
|id=chr6:143895612..143895631,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!7.70e-15!15;UBERON:0003101!6.38e-14!16;UBERON:0000079!6.38e-14!16;UBERON:0003133!4.42e-13!24;UBERON:0001301!2.42e-12!3;UBERON:0006555!2.42e-12!3;UBERON:0005103!2.42e-12!3;UBERON:0000083!2.42e-12!3;UBERON:0009201!2.42e-12!3;UBERON:0004819!2.42e-12!3;UBERON:0006553!2.42e-12!3;UBERON:0003074!2.42e-12!3;UBERON:0003060!2.42e-12!3;UBERON:0005156!4.55e-12!26;UBERON:0000990!4.55e-12!26;UBERON:0000473!1.66e-10!14;UBERON:0001374!6.88e-10!1;UBERON:0001630!6.88e-10!1;UBERON:0004252!6.88e-10!1;UBERON:0003663!6.88e-10!1;UBERON:0001383!6.88e-10!1;UBERON:0005090!6.88e-10!1;UBERON:0003661!6.88e-10!1;UBERON:0000080!1.71e-09!4;UBERON:0005904!1.71e-09!4;UBERON:0006947!1.71e-09!4;UBERON:0002120!1.71e-09!4;UBERON:0004054!1.71e-09!4;UBERON:0004875!1.71e-09!4;UBERON:0004876!1.71e-09!4;UBERON:0005721!1.71e-09!4;UBERON:0005754!1.71e-09!4;UBERON:0007297!1.71e-09!4;UBERON:0004175!3.68e-09!9;UBERON:0004176!1.05e-08!17;UBERON:0009196!1.05e-08!17;UBERON:0009117!1.05e-08!17;UBERON:0000991!3.08e-08!18;UBERON:0005564!3.08e-08!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.54e-10,14;UBERON:0003135,1.51e-09,15;UBERON:0003101,5.40e-09,16;UBERON:0000079,5.40e-09,16;UBERON:0004176,1.66e-08,17;UBERON:0009196,1.66e-08,17;UBERON:0009117,1.66e-08,17;UBERON:0000991,4.53e-08,18;UBERON:0005564,4.53e-08,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,56.3837013701593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.05599912474307,0,0,0,0,0,0,0,0,0,0,8.90634261808668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,436.862027480247,0,0,0,0,0,0,0,0,7.73069186643219,201.621004380506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@Sox5 | |||
}} |
Revision as of 09:32, 5 August 2015
Short description: | p3@Sox5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Sox5_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000111746, ENSMUST00000111748, ENSMUST00000144289, uc009eqj.1_5end |
EntrezGene: | 20678 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 3.54e-10 | 14 |
male reproductive organ | 1.51e-09 | 15 |
male organism | 5.40e-09 | 16 |
male reproductive system | 5.40e-09 | 16 |
external genitalia | 1.66e-08 | 17 |
indifferent external genitalia | 1.66e-08 | 17 |
indifferent gonad | 1.66e-08 | 17 |
gonad | 4.53e-08 | 18 |
gonad primordium | 4.53e-08 | 18 |