FFCP PHASE1:Mm9::chr4:40728877..40728888,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=280 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:40728877..40728888,- | |||
|description=CAGE_peak_at_chr4:40728877..40728888,- | |description=CAGE_peak_at_chr4:40728877..40728888,- | ||
|id=chr4:40728877..40728888,- | |id=chr4:40728877..40728888,- | ||
|ontology_enrichment_celltype=CL:0000791!5.32e-36!9;CL:0000789!5.32e-36!9;CL:0002420!5.32e-36!9;CL:0002419!5.32e-36!9;CL:0000790!5.32e-36!9;CL:0000838!3.46e-33!12;CL:0000624!8.15e-32!8;CL:0000542!1.62e-30!13;CL:0000051!1.62e-30!13;CL:0000988!2.80e-30!32;CL:0002032!2.80e-30!32;CL:0000037!2.80e-30!32;CL:0000566!2.80e-30!32;CL:0000837!2.80e-30!32;CL:0000084!3.15e-29!11;CL:0000827!3.15e-29!11;CL:0000893!1.67e-23!6;CL:0002489!1.67e-23!6;CL:0000898!1.67e-23!6;CL:0000809!1.67e-23!6;CL:0000810!1.67e-23!6;CL:0000895!1.67e-23!6;CL:0000808!1.67e-23!6;CL:0000894!1.67e-23!6;CL:0000806!1.67e-23!6;CL:0000807!1.67e-23!6;CL:0000805!1.67e-23!6;CL:0002425!1.67e-23!6;CL:0002436!1.67e-23!6;CL:0002427!1.67e-23!6;CL:0002428!1.67e-23!6;CL:0002429!1.67e-23!6;CL:0002433!1.67e-23!6;CL:0002431!1.67e-23!6;CL:0002432!1.67e-23!6;CL:0000738!5.64e-23!17;CL:0002087!5.64e-23!17;CL:0002320!3.08e-20!46;CL:0000134!3.08e-20!46;CL:0002031!3.50e-18!25;CL:0000219!7.88e-17!54;CL:0000034!7.18e-14!97;CL:0000063!2.92e-13!66;CL:0000144!1.84e-10!121;CL:0000012!1.84e-10!121;CL:0000723!7.76e-09!91;CL:0000048!7.76e-09!91;CL:0000548!2.16e-07!115;CL:0000004!2.16e-07!115;CL:0000255!2.16e-07!115;CL:0000049!3.30e-07!19;CL:0002371!3.98e-07!118 | |ontology_enrichment_celltype=CL:0000791!5.32e-36!9;CL:0000789!5.32e-36!9;CL:0002420!5.32e-36!9;CL:0002419!5.32e-36!9;CL:0000790!5.32e-36!9;CL:0000838!3.46e-33!12;CL:0000624!8.15e-32!8;CL:0000542!1.62e-30!13;CL:0000051!1.62e-30!13;CL:0000988!2.80e-30!32;CL:0002032!2.80e-30!32;CL:0000037!2.80e-30!32;CL:0000566!2.80e-30!32;CL:0000837!2.80e-30!32;CL:0000084!3.15e-29!11;CL:0000827!3.15e-29!11;CL:0000893!1.67e-23!6;CL:0002489!1.67e-23!6;CL:0000898!1.67e-23!6;CL:0000809!1.67e-23!6;CL:0000810!1.67e-23!6;CL:0000895!1.67e-23!6;CL:0000808!1.67e-23!6;CL:0000894!1.67e-23!6;CL:0000806!1.67e-23!6;CL:0000807!1.67e-23!6;CL:0000805!1.67e-23!6;CL:0002425!1.67e-23!6;CL:0002436!1.67e-23!6;CL:0002427!1.67e-23!6;CL:0002428!1.67e-23!6;CL:0002429!1.67e-23!6;CL:0002433!1.67e-23!6;CL:0002431!1.67e-23!6;CL:0002432!1.67e-23!6;CL:0000738!5.64e-23!17;CL:0002087!5.64e-23!17;CL:0002320!3.08e-20!46;CL:0000134!3.08e-20!46;CL:0002031!3.50e-18!25;CL:0000219!7.88e-17!54;CL:0000034!7.18e-14!97;CL:0000063!2.92e-13!66;CL:0000144!1.84e-10!121;CL:0000012!1.84e-10!121;CL:0000723!7.76e-09!91;CL:0000048!7.76e-09!91;CL:0000548!2.16e-07!115;CL:0000004!2.16e-07!115;CL:0000255!2.16e-07!115;CL:0000049!3.30e-07!19;CL:0002371!3.98e-07!118 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,4.10e-17,12;CL:0000542,8.32e-16,13;CL:0000051,8.32e-16,13;CL:0000988,1.20e-15,32;CL:0002032,1.20e-15,32;CL:0000037,1.20e-15,32;CL:0000837,1.20e-15,32;CL:0000791,6.89e-15,9;CL:0000789,6.89e-15,9;CL:0002420,6.89e-15,9;CL:0002419,6.89e-15,9;CL:0000790,6.89e-15,9;CL:0000084,3.04e-12,11;CL:0000827,3.04e-12,11;CL:0000738,4.17e-12,17;CL:0002087,4.17e-12,17;CL:0002320,9.86e-11,46;CL:0000134,9.86e-11,46;CL:0000624,8.77e-10,8;CL:0000815,9.82e-10,1;CL:0000792,9.82e-10,1;CL:0000625,1.19e-09,1;CL:0000945,1.73e-09,1;CL:0000236,1.73e-09,1;CL:0000826,1.73e-09,1;CL:0000034,2.81e-09,97;CL:0000219,4.65e-09,54;CL:0002031,3.08e-08,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!3.08e-20!46 | |ontology_enrichment_uberon=UBERON:0002384!3.08e-20!46 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.86e-11,46 | |||
|phase1_expression=0,0,0,0,0,0,0,4.39019299701359,0.985521055061667,0.70219357896598,0.171217968225505,0.239316476986009,0.856003649656029,1.22388563386596,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01339127269284,2.90144856804538,3.02484419228218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31796636956512,0.599902730993408,1.14363204365758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0.257347907114715,1.42081749697796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5298058699447,1.25956307091292,1.10559979043539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,4.39019299701359,0.985521055061667,0.70219357896598,0.171217968225505,0.239316476986009,0.856003649656029,1.22388563386596,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01339127269284,2.90144856804538,3.02484419228218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31796636956512,0.599902730993408,1.14363204365758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0.257347907114715,1.42081749697796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5298058699447,1.25956307091292,1.10559979043539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:40728877..40728888,- | |short_description=p@chr4:40728877..40728888,- | ||
}} | }} |
Latest revision as of 10:32, 5 August 2015
Short description: | p@chr4:40728877..40728888, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:40728877..40728888, - |
Coexpression cluster: | MCL_coexpression_mm9:280 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 4.10e-17 | 12 |
lymphocyte | 8.32e-16 | 13 |
common lymphoid progenitor | 8.32e-16 | 13 |
hematopoietic cell | 1.20e-15 | 32 |
hematopoietic oligopotent progenitor cell | 1.20e-15 | 32 |
hematopoietic stem cell | 1.20e-15 | 32 |
hematopoietic multipotent progenitor cell | 1.20e-15 | 32 |
mature alpha-beta T cell | 6.89e-15 | 9 |
alpha-beta T cell | 6.89e-15 | 9 |
immature T cell | 6.89e-15 | 9 |
mature T cell | 6.89e-15 | 9 |
immature alpha-beta T cell | 6.89e-15 | 9 |
T cell | 3.04e-12 | 11 |
pro-T cell | 3.04e-12 | 11 |
leukocyte | 4.17e-12 | 17 |
nongranular leukocyte | 4.17e-12 | 17 |
connective tissue cell | 9.86e-11 | 46 |
mesenchymal cell | 9.86e-11 | 46 |
CD4-positive, alpha-beta T cell | 8.77e-10 | 8 |
regulatory T cell | 9.82e-10 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 9.82e-10 | 1 |
CD8-positive, alpha-beta T cell | 1.19e-09 | 1 |
lymphocyte of B lineage | 1.73e-09 | 1 |
B cell | 1.73e-09 | 1 |
pro-B cell | 1.73e-09 | 1 |
stem cell | 2.81e-09 | 97 |
motile cell | 4.65e-09 | 54 |
hematopoietic lineage restricted progenitor cell | 3.08e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 9.86e-11 | 46 |