FFCP PHASE1:Mm9::chr11:115243181..115243213,+: Difference between revisions
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{{FFCP|EntrezGene=237988|HGNC=|MCL_coexpression_id=22|UniProt=A2A6T1|association_with_transcript=-16bp_to_ENSMUST00000053288,NM_001080929,uc007mhi.1_5end|description=CAGE_peak_2_at_Cdr2l_5end|id=chr11:115243181..115243213,+|ontology_enrichment_celltype=CL:0002319!6.56e-19!43;CL:0000221!8.01e-19!44;CL:0000133!8.01e-19!44;CL:0000055!5.40e-18!50;CL:0000540!3.93e-16!33;CL:0000047!3.93e-16!33;CL:0000031!3.93e-16!33;CL:0000404!3.93e-16!33;CL:0000393!1.02e-15!39;CL:0000211!1.02e-15!39;CL:0000117!2.35e-14!23;CL:0000337!2.35e-14!23;CL:0002321!7.82e-08!70;CL:0000220!7.82e-08!70|ontology_enrichment_celltype_v019_2=CL:0002319,2.72e-19,43;CL:0000221,3.32e-19,44;CL:0000133,3.32e-19,44;CL:0000540,8.77e-17,33;CL:0000047,8.77e-17,33;CL:0000031,8.77e-17,33;CL:0000404,8.77e-17,33;CL:0000393,2.38e-16,39;CL:0000211,2.38e-16,39;CL:0000117,6.30e-15,23;CL:0000337,6.30e-15,23;CL:0002321,2.48e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.20e-21!75;UBERON:0001016!3.20e-21!75;UBERON:0004121!2.91e-20!102;UBERON:0000924!2.91e-20!102;UBERON:0006601!2.91e-20!102;UBERON:0001017!3.28e-20!73;UBERON:0005743!3.28e-20!73;UBERON:0002346!4.28e-16!71;UBERON:0003075!4.28e-16!71;UBERON:0007284!4.28e-16!71;UBERON:0001049!1.35e-12!52;UBERON:0005068!1.35e-12!52;UBERON:0006241!1.35e-12!52;UBERON:0007135!1.35e-12!52;UBERON:0000955!4.62e-11!50;UBERON:0006238!4.62e-11!50;UBERON:0000033!8.84e-11!63;UBERON:0002616!1.23e-10!49;UBERON:0002020!9.99e-09!34;UBERON:0000468!7.61e-08!333;UBERON:0003056!8.27e-08!49;UBERON:0003076!1.07e-07!12;UBERON:0003057!1.07e-07!12;UBERON:0003080!5.29e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.91e-21,75;UBERON:0001017,2.12e-20,73;UBERON:0004121,1.34e-17,95;UBERON:0000924,1.34e-17,95;UBERON:0006601,1.34e-17,95;UBERON:0010314,6.18e-15,92;UBERON:0002346,7.28e-14,64;UBERON:0003075,7.28e-14,64;UBERON:0007284,7.28e-14,64;UBERON:0000073,2.68e-13,54;UBERON:0001049,1.61e-12,52;UBERON:0005068,1.61e-12,52;UBERON:0006241,1.61e-12,52;UBERON:0007135,1.61e-12,52;UBERON:0010371,9.00e-12,73;UBERON:0000955,1.00e-09,47;UBERON:0006238,1.00e-09,47;UBERON:0002616,2.65e-09,46;UBERON:0002020,1.70e-08,34;UBERON:0003076,5.69e-08,12;UBERON:0003057,5.69e-08,12;UBERON:0003056,1.31e-07,49;UBERON:0003080,8.48e-07,40|phase1_expression=3.36312578920067,0,0.909998478779072,0,0,0.839396359559449,0.700837921786577,0,0.140788722151667,0,0,0,0,0,0.333109761815663,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,0.288851619751275,0.332469290716985,1.02084678131185,0,0,0,0,0,0,2.14024590558481,1.92616169317078,3.67093504323363,9.38869613217647,3.2703773457067,3.95435128922049,0.972149495371417,4.19959264876088,7.18762821824858,0,0,0.336093799142464,3.08711323243136,2.0057340795713,1.54701627683233,13.3528864167335,12.1667925232568,6.33831403506179,8.4711133017283,7.11435836888911,0.449949858640699,1.97773272513395,0.7104801149461,3.59520132622086,1.53687322128622,9.33206510776299,10.3954572515402,9.25429829946081,7.14127461009509,8.61387309711293,7.83941114975706,8.4344014496048,7.35375029288017,3.30347642998166,4.85211884723713,4.6081959976873,12.7929699098288,11.5274430939036,11.9810075228055,3.62937898701795,5.06486349028512,2.90316670775939,5.89257170947335,6.54909731675874,8.94717339961443,4.61929779332423,3.85414956544606,5.2175607966302,0.860423876981386,0,0,0,0,0.842666520790511,1.1930122580464,2.07828803682295,3.18005617059306,2.25349471642689,2.56652954828636,0,0,0.865964164044856,0.253359865475099,1.01104889002957,0.5709193985953,0,2.82040064223167,2.60227990149204,3.04465478312141,3.92046345335299,3.46662073271032,5.76184664964954,3.39299796590124,0.494389935468748,1.44599356919912,0,3.39710384889559,0.883366073841574,0.969750506270444,0,4.9772735491963,6.91174132484402,0,0,0,0,4.04434726393021,1.83000241127451,11.9371634507221,2.9550134432687,2.04572365864264,2.0778804455956,1.62241263067758,5.29564692021645,0.870848794270651,0.505445516867349,0.420883711772948,2.08192708740326,3.21862946206862,3.06105620669094,2.56198190320716,4.69451844144162,3.84341160854549,2.99845518591132,1.29351685369508,3.01795190105979,4.16033376369202,2.63926686245923,2.84954452155847,0.834141747676794,1.0447564995665,2.67516777330327,4.17971960318836,0,0,0,2.07125772535502,2.11073453982987,1.98068267607116,1.65721314909647,1.77087808572663,2.46827380619805,1.62773761325285,1.60964040839772,1.75148013550754,3.45575684818309,1.47750717671186,1.78351381000883,1.46199987425332,1.09775057645525,1.61047702512446,2.94405927989778,5.9684675179985,0.330418782983798,0.264450566663544,2.13288250535234,1.16118335930219,1.41754207454303,1.21010114774006,0.889512175379481,1.14135375667535,0.474529061544512,0.823494773620054,0.754005626400808,1.39269530428806,1.36474860983384,1.79763881730844,0.648414149624083,0.597423819763102,3.03468641524931,1.82797620175566,0,1.4255592949172,2.32742984601151,2.87556861550306,2.02356918797623,0.738050739898011,0.31399745568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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:237988 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2A6T1 | |||
|association_with_transcript=-16bp_to_ENSMUST00000053288,NM_001080929,uc007mhi.1_5end | |||
|cluster_id=chr11:115243181..115243213,+ | |||
|description=CAGE_peak_2_at_Cdr2l_5end | |||
|id=chr11:115243181..115243213,+ | |||
|ontology_enrichment_celltype=CL:0002319!6.56e-19!43;CL:0000221!8.01e-19!44;CL:0000133!8.01e-19!44;CL:0000055!5.40e-18!50;CL:0000540!3.93e-16!33;CL:0000047!3.93e-16!33;CL:0000031!3.93e-16!33;CL:0000404!3.93e-16!33;CL:0000393!1.02e-15!39;CL:0000211!1.02e-15!39;CL:0000117!2.35e-14!23;CL:0000337!2.35e-14!23;CL:0002321!7.82e-08!70;CL:0000220!7.82e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.72e-19,43;CL:0000221,3.32e-19,44;CL:0000133,3.32e-19,44;CL:0000540,8.77e-17,33;CL:0000047,8.77e-17,33;CL:0000031,8.77e-17,33;CL:0000404,8.77e-17,33;CL:0000393,2.38e-16,39;CL:0000211,2.38e-16,39;CL:0000117,6.30e-15,23;CL:0000337,6.30e-15,23;CL:0002321,2.48e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.20e-21!75;UBERON:0001016!3.20e-21!75;UBERON:0004121!2.91e-20!102;UBERON:0000924!2.91e-20!102;UBERON:0006601!2.91e-20!102;UBERON:0001017!3.28e-20!73;UBERON:0005743!3.28e-20!73;UBERON:0002346!4.28e-16!71;UBERON:0003075!4.28e-16!71;UBERON:0007284!4.28e-16!71;UBERON:0001049!1.35e-12!52;UBERON:0005068!1.35e-12!52;UBERON:0006241!1.35e-12!52;UBERON:0007135!1.35e-12!52;UBERON:0000955!4.62e-11!50;UBERON:0006238!4.62e-11!50;UBERON:0000033!8.84e-11!63;UBERON:0002616!1.23e-10!49;UBERON:0002020!9.99e-09!34;UBERON:0000468!7.61e-08!333;UBERON:0003056!8.27e-08!49;UBERON:0003076!1.07e-07!12;UBERON:0003057!1.07e-07!12;UBERON:0003080!5.29e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.91e-21,75;UBERON:0001017,2.12e-20,73;UBERON:0004121,1.34e-17,95;UBERON:0000924,1.34e-17,95;UBERON:0006601,1.34e-17,95;UBERON:0010314,6.18e-15,92;UBERON:0002346,7.28e-14,64;UBERON:0003075,7.28e-14,64;UBERON:0007284,7.28e-14,64;UBERON:0000073,2.68e-13,54;UBERON:0001049,1.61e-12,52;UBERON:0005068,1.61e-12,52;UBERON:0006241,1.61e-12,52;UBERON:0007135,1.61e-12,52;UBERON:0010371,9.00e-12,73;UBERON:0000955,1.00e-09,47;UBERON:0006238,1.00e-09,47;UBERON:0002616,2.65e-09,46;UBERON:0002020,1.70e-08,34;UBERON:0003076,5.69e-08,12;UBERON:0003057,5.69e-08,12;UBERON:0003056,1.31e-07,49;UBERON:0003080,8.48e-07,40 | |||
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| |||
|short_description=p2@Cdr2l | |||
}} |
Revision as of 10:46, 5 August 2015
Short description: | p2@Cdr2l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cdr2l_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -16bp_to_ENSMUST00000053288, NM_001080929, uc007mhi.1_5end |
EntrezGene: | 237988 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.72e-19 | 43 |
ectodermal cell | 3.32e-19 | 44 |
neurectodermal cell | 3.32e-19 | 44 |
neuron | 8.77e-17 | 33 |
neuronal stem cell | 8.77e-17 | 33 |
neuroblast | 8.77e-17 | 33 |
electrically signaling cell | 8.77e-17 | 33 |
electrically responsive cell | 2.38e-16 | 39 |
electrically active cell | 2.38e-16 | 39 |
CNS neuron (sensu Vertebrata) | 6.30e-15 | 23 |
neuroblast (sensu Vertebrata) | 6.30e-15 | 23 |
embryonic cell | 2.48e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.91e-21 | 75 |
central nervous system | 2.12e-20 | 73 |
ectoderm-derived structure | 1.34e-17 | 95 |
ectoderm | 1.34e-17 | 95 |
presumptive ectoderm | 1.34e-17 | 95 |
structure with developmental contribution from neural crest | 6.18e-15 | 92 |
neurectoderm | 7.28e-14 | 64 |
neural plate | 7.28e-14 | 64 |
presumptive neural plate | 7.28e-14 | 64 |
regional part of nervous system | 2.68e-13 | 54 |
neural tube | 1.61e-12 | 52 |
neural rod | 1.61e-12 | 52 |
future spinal cord | 1.61e-12 | 52 |
neural keel | 1.61e-12 | 52 |
ecto-epithelium | 9.00e-12 | 73 |
brain | 1.00e-09 | 47 |
future brain | 1.00e-09 | 47 |
regional part of brain | 2.65e-09 | 46 |
gray matter | 1.70e-08 | 34 |
posterior neural tube | 5.69e-08 | 12 |
chordal neural plate | 5.69e-08 | 12 |
pre-chordal neural plate | 1.31e-07 | 49 |
anterior neural tube | 8.48e-07 | 40 |