FFCP PHASE1:Mm9::chr17:88040769..88040816,+: Difference between revisions
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|id=chr17:88040769..88040816,+
|short_description=p@chr17:88040769..88040816,+
|description=CAGE_peak_at_chr17:88040769..88040816,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=358 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:88040769..88040816,+ | |||
|description=CAGE_peak_at_chr17:88040769..88040816,+ | |||
|id=chr17:88040769..88040816,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.25e-09!25;CL:0002563!1.29e-08!9;CL:0002251!1.29e-08!9;CL:0002076!3.84e-08!15;CL:0000075!3.74e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.35e-19,25;CL:0002076,7.93e-17,15;CL:0002563,3.85e-14,9;CL:0002251,3.85e-14,9;CL:0000075,7.98e-14,7;CL:0000223,3.69e-12,20;CL:0000239,1.28e-11,6;CL:0000677,1.28e-11,6;CL:0000584,1.28e-11,6;CL:0000068,2.85e-09,3;CL:0002202,2.85e-09,3;CL:0000069,2.85e-09,3;CL:0002632,2.85e-09,3;CL:0002368,2.85e-09,3;CL:0000307,2.85e-09,3;CL:0000377,2.85e-09,3;CL:0000682,4.47e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!6.82e-21!43;UBERON:0005409!2.50e-18!59;UBERON:0000344!1.28e-14!15;UBERON:0001242!1.46e-12!13;UBERON:0000060!1.46e-12!13;UBERON:0001262!1.46e-12!13;UBERON:0004786!1.46e-12!13;UBERON:0001007!5.98e-12!128;UBERON:0001555!5.98e-12!128;UBERON:0007026!5.98e-12!128;UBERON:0004119!1.87e-11!130;UBERON:0000925!1.87e-11!130;UBERON:0006595!1.87e-11!130;UBERON:0004921!1.04e-10!126;UBERON:0004185!1.04e-10!126;UBERON:0004923!4.42e-10!24;UBERON:0000485!4.49e-10!11;UBERON:0003350!1.29e-08!9;UBERON:0004808!1.29e-08!9;UBERON:0001277!1.29e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.12e-30,15;UBERON:0000160,1.40e-29,31;UBERON:0001242,6.30e-25,13;UBERON:0001262,6.30e-25,13;UBERON:0004786,6.30e-25,13;UBERON:0005409,2.40e-20,47;UBERON:0004923,3.98e-18,24;UBERON:0000485,1.03e-14,11;UBERON:0003350,3.85e-14,9;UBERON:0004808,3.85e-14,9;UBERON:0001277,3.85e-14,9;UBERON:0002108,6.39e-13,4;UBERON:0001007,1.27e-10,116;UBERON:0001555,1.27e-10,116;UBERON:0007026,1.27e-10,116;UBERON:0004119,2.36e-10,118;UBERON:0000925,2.36e-10,118;UBERON:0006595,2.36e-10,118;UBERON:0000331,3.62e-10,3;UBERON:0002116,3.62e-10,3;UBERON:0001204,3.62e-10,3;UBERON:0001168,3.62e-10,3;UBERON:0003126,2.85e-09,3;UBERON:0001005,2.85e-09,3;UBERON:0007196,2.85e-09,3;UBERON:0001558,2.85e-09,3;UBERON:0004921,1.38e-08,114;UBERON:0001962,1.81e-07,2;UBERON:0001961,1.81e-07,2;UBERON:0001744,1.81e-07,2 | |||
|phase1_expression=0.80074423552397,2.44282785347553,0.454999239389536,2.72217790176147,1.00179145989269,2.18243053485457,3.97141489012394,0,0,0.234064526321993,0,0,0,0,0,0,0,0.157731082679119,0,0,0.0850432901510698,0,0,9.5995453676044,9.86459908588831,2.8711598205751,1.7230479846363,2.58565479223067,14.4417798786844,5.29263272495855,3.32595765982957,0,0,0,0.866554859253824,1.49611180822643,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0,0,1.12674735821344,0,0,0,1.29894624606728,2.53359865475099,5.56076889516262,1.02765491747154,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,0,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,0,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0,0.215567992932842,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96502539580558,0.793351699990633,0,0,0.515469845288373,0.605050573870028,0.22237804384487,0.760902504450237,3.32170343081158,1.97638745668813,0.754005626400808,0.596869416123452,1.16978452271472,1.79763881730844,3.24207074812041,2.98711909881551,0.189667900953082,0.114248512609729,0,0,0,0.0701358198903186,0,0.147610147979602,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0.234690248288502,0,0.238043640886014,0,0.157635144106191,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.329940245945071,0,0.728341908464944,0.906970670894253,0.188605079755898,0.590603785761546,0,0,0.727067458955011,1.06949213515416,0,0,1.03135543248187,0.680879211507576,0.18006109403131,0.129358683782755,0.428674070063185,0.177340233642274,0.178368817602071,0.658196082408484,0.913394847343798,0,0,0.441056796109924,0.8244312647074,0.161464426695906,0,0.238744688006273,0.164140899745061,3.78925087618806,0,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.418176592028937,0.87345025498471,0.134864346384821,0,0,3.24037433229482,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.308132871494482,0.129920822977795,0,0,0,0,0,0.0762068066549998,0.100826185136841,0.194915761479505,0.0962118416403295,0,0,0.443971906748129,0.0897138566094757,0.671538465456314,0,0.375364950902364,0.183151624267265,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0.338458431566706,0,0,0.135804113845862,0,0,0,0,0,0.385813221962283,0,0,0,0,0.220591419119515,0 | |phase1_expression=0.80074423552397,2.44282785347553,0.454999239389536,2.72217790176147,1.00179145989269,2.18243053485457,3.97141489012394,0,0,0.234064526321993,0,0,0,0,0,0,0,0.157731082679119,0,0,0.0850432901510698,0,0,9.5995453676044,9.86459908588831,2.8711598205751,1.7230479846363,2.58565479223067,14.4417798786844,5.29263272495855,3.32595765982957,0,0,0,0.866554859253824,1.49611180822643,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0,0,1.12674735821344,0,0,0,1.29894624606728,2.53359865475099,5.56076889516262,1.02765491747154,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,0,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,0,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0,0.215567992932842,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96502539580558,0.793351699990633,0,0,0.515469845288373,0.605050573870028,0.22237804384487,0.760902504450237,3.32170343081158,1.97638745668813,0.754005626400808,0.596869416123452,1.16978452271472,1.79763881730844,3.24207074812041,2.98711909881551,0.189667900953082,0.114248512609729,0,0,0,0.0701358198903186,0,0.147610147979602,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0.234690248288502,0,0.238043640886014,0,0.157635144106191,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.329940245945071,0,0.728341908464944,0.906970670894253,0.188605079755898,0.590603785761546,0,0,0.727067458955011,1.06949213515416,0,0,1.03135543248187,0.680879211507576,0.18006109403131,0.129358683782755,0.428674070063185,0.177340233642274,0.178368817602071,0.658196082408484,0.913394847343798,0,0,0.441056796109924,0.8244312647074,0.161464426695906,0,0.238744688006273,0.164140899745061,3.78925087618806,0,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.418176592028937,0.87345025498471,0.134864346384821,0,0,3.24037433229482,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.308132871494482,0.129920822977795,0,0,0,0,0,0.0762068066549998,0.100826185136841,0.194915761479505,0.0962118416403295,0,0,0.443971906748129,0.0897138566094757,0.671538465456314,0,0.375364950902364,0.183151624267265,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0.338458431566706,0,0,0.135804113845862,0,0,0,0,0,0.385813221962283,0,0,0,0,0.220591419119515,0 | ||
|short_description=p@chr17:88040769..88040816,+ | |||
}} | }} |
Latest revision as of 11:32, 5 August 2015
Short description: | p@chr17:88040769..88040816, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:88040769..88040816, + |
Coexpression cluster: | MCL_coexpression_mm9:358 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.35e-19 | 25 |
endo-epithelial cell | 7.93e-17 | 15 |
intestinal epithelial cell | 3.85e-14 | 9 |
epithelial cell of alimentary canal | 3.85e-14 | 9 |
columnar/cuboidal epithelial cell | 7.98e-14 | 7 |
endodermal cell | 3.69e-12 | 20 |
brush border epithelial cell | 1.28e-11 | 6 |
gut absorptive cell | 1.28e-11 | 6 |
enterocyte | 1.28e-11 | 6 |
duct epithelial cell | 2.85e-09 | 3 |
epithelial cell of tracheobronchial tree | 2.85e-09 | 3 |
branched duct epithelial cell | 2.85e-09 | 3 |
epithelial cell of lower respiratory tract | 2.85e-09 | 3 |
respiratory epithelial cell | 2.85e-09 | 3 |
tracheal epithelial cell | 2.85e-09 | 3 |
tracheoblast | 2.85e-09 | 3 |
M cell of gut | 4.47e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.12e-30 | 15 |
intestine | 1.40e-29 | 31 |
intestinal mucosa | 6.30e-25 | 13 |
wall of intestine | 6.30e-25 | 13 |
gastrointestinal system mucosa | 6.30e-25 | 13 |
gastrointestinal system | 2.40e-20 | 47 |
organ component layer | 3.98e-18 | 24 |
simple columnar epithelium | 1.03e-14 | 11 |
epithelium of mucosa | 3.85e-14 | 9 |
gastrointestinal system epithelium | 3.85e-14 | 9 |
intestinal epithelium | 3.85e-14 | 9 |
small intestine | 6.39e-13 | 4 |
digestive system | 1.27e-10 | 116 |
digestive tract | 1.27e-10 | 116 |
primitive gut | 1.27e-10 | 116 |
endoderm-derived structure | 2.36e-10 | 118 |
endoderm | 2.36e-10 | 118 |
presumptive endoderm | 2.36e-10 | 118 |
ileal mucosa | 3.62e-10 | 3 |
ileum | 3.62e-10 | 3 |
mucosa of small intestine | 3.62e-10 | 3 |
wall of small intestine | 3.62e-10 | 3 |
trachea | 2.85e-09 | 3 |
respiratory airway | 2.85e-09 | 3 |
tracheobronchial tree | 2.85e-09 | 3 |
lower respiratory tract | 2.85e-09 | 3 |
subdivision of digestive tract | 1.38e-08 | 114 |
gut-associated lymphoid tissue | 1.81e-07 | 2 |
mucosa-associated lymphoid tissue | 1.81e-07 | 2 |
lymphoid tissue | 1.81e-07 | 2 |