FFCP PHASE1:Mm9::chr11:120209493..120209503,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=60|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:120209493..120209503,-|id=chr11:120209493..120209503,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002612,2.38e-08,3;CL:0002494,7.00e-08,3;CL:0000737,7.00e-08,3;CL:0000746,7.00e-08,3;CL:0000513,7.00e-08,3;CL:0000117,7.45e-08,23;CL:0000337,7.45e-08,23;CL:0000393,3.49e-07,39;CL:0000211,3.49e-07,39;CL:0002611,6.66e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!3.32e-08!34;UBERON:0001049!3.34e-08!52;UBERON:0005068!3.34e-08!52;UBERON:0006241!3.34e-08!52;UBERON:0007135!3.34e-08!52;UBERON:0002346!3.28e-07!71;UBERON:0003075!3.28e-07!71;UBERON:0007284!3.28e-07!71;UBERON:0004121!3.30e-07!102;UBERON:0000924!3.30e-07!102;UBERON:0006601!3.30e-07!102;UBERON:0000073!4.47e-07!75;UBERON:0001016!4.47e-07!75;UBERON:0001017!7.01e-07!73;UBERON:0005743!7.01e-07!73|ontology_enrichment_uberon_v019_2=UBERON:0001948,1.30e-13,5;UBERON:0002315,1.30e-13,5;UBERON:0002240,2.79e-11,6;UBERON:0005174,2.79e-11,6;UBERON:0001137,2.79e-11,6;UBERON:0002020,1.15e-08,34;UBERON:0005631,1.89e-08,3;UBERON:0000478,1.89e-08,3;UBERON:0000158,1.89e-08,3;UBERON:0002257,2.38e-08,3;UBERON:0002256,6.66e-07,2|phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,0.30246421130683,0,0.33575854382378,0,0.387369970324729,0.140788722151667,1.17032263160997,0,0.0797721589953364,0.856003649656029,0.524522414513984,0,0,0,0.157731082679119,0,0.42438965179803,0.595303031057488,0,0.261199789138935,0.159992422793407,0,0.57423196411502,0.86152399231815,0,0,0.252030129759931,0,0,0,0,0,0,0,1.25559489221072,0.7813353445238,1.57057123192139,0.588231488031014,1.36609096991689,3.39857247121808,0.251793635951155,0.405507724878058,0.367093504323363,0.782391344348039,0.436050312760893,1.09843091367236,1.55543919259427,0.419959264876088,0,0.167782606057736,1.45072428402269,0.672187598284928,1.28629718017973,1.43266719969378,1.54701627683233,1.01158230429799,0.528990979272033,3.1691570175309,2.03306719241479,1.77858959222228,2.2497492932035,0,0.7104801149461,0.299600110518405,0,0.207379224616955,0,0,5.99867067247988,3.75476519617743,0.367472397644862,0.383381884072945,0.919218786610021,0,0.766124028511126,0.768032666281217,1.84640802822271,3.20206752608434,0.52091337055676,0.558365998002762,0.56276261003168,0.45839474333043,2.94628585473668,2.70506193518296,1.1183966749518,0.302904773332736,0.453429360640713,0.289864488701678,0,0,0,0,0,0.280888840263504,0.340860645156116,0.779358013808606,0.35333957451034,0.422530259330042,0,0,0,0.432982082022428,0,0.505524445014783,0,0.517875767294343,0.148442139064825,0,0.608930956624282,0.461230994512117,0.301445281105245,0.587943535678524,0,3.46072954828123,0.722996784599558,0,0,0.220841518460394,0,0,0.292780797011547,0.41889341362691,0,0.11981512450592,0,0.508280908292259,1.19832511523858,0.915001205637253,2.89005009859588,0.347648640384553,1.27857728665165,0.20778804455956,0.162241263067758,0.305518091550949,0.124406970610093,0.252722758433675,0,0.130120442962704,0.229902104433473,0.540186389416048,0,0.408218994907967,0.2562274405697,0.468508622798644,0.258703370739016,0,0.189106080167819,0.351902248327898,0,0,1.39300866608867,0.823128545631774,0.199034266818493,0,0.772043721344145,0,0,0.234526059981096,0.36012412292203,0,0,0.154267112887378,0,0,0.116765342367169,0,0.164167464079095,0.162137619091711,0.292399974850665,0,0,0.210289948564127,0.92614151141356,0.330418782983798,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0,0,0,0,0,0.597423819763102,0,0,0,0,0.193952487167626,0.140271639780637,0.126473074248515,0.442830443938806,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0.169745085775188,0.234690248288502,0,0.476087281772027,0.975668239288994,0.157635144106191,0.664394068946325,0.318909537314974,0.327726629431476,0.172684981865896,0,0,0,0,0.551873492609465,0,0.703270119553219,0.163934945376675,0,0.315508219416257,0.780877488593277,0,0,0.445597348164788,0,0,0,0,0.642642632843614,0,0,0,0.329940245945071,0,0,0,0,0,0.307435147943927,0,0.363533729477506,0,0,0,0,0,0,0.258717367565509,0.214337035031592,0.354680467284547,0.356737635204141,0.658196082408484,0.304464949114599,1.87737366450968,1.27099242518292,0.661585194164886,0.49465875882444,0.645857706783622,0.180938774784468,0.119372344003136,0.164140899745061,0,0.741701208042039,0,0.206386867963223,0.185194527369712,0,0,0,0.339956859987711,0.559805809294632,0.552799895217695,0,0,0,0.648032044930808,0,0.218362563746178,0.404593039154462,0,0.26175594198403,0.129614973291793,0,3.94585057078933,0,0,0.194451188344048,0,0.168956125490778,0.234714477291508,0.13020438484395,0.419437377702843,2.17425708743405,2.01621004380506,0.316011120628178,0,0,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0.201932899896295,0.228620419965,0,0.0974578807397524,0.577271049841977,0.233753804363138,1.13365191807606,0.221985953374065,0.717710852875806,0.839423081820392,0,0.187682475451182,0.183151624267265,0.214368379079066,0,0.564751842617067,0.460325236507177,0.572895513439397,0.515559547031063,1.37016503954128,0,0,0.45032120322422,1.81256963593682,0.51776031175182,0.207574695168353,0,0.170733605754134,0.243106717068294,0.419226325255965,0,0.44449345560323,0.618105171716683,0.64183841918363,0.505394423527595,0.760437899670719,0.943131706930381,0.468207537349412,0.256100609619477,0.516919220600519,0.476293691283074,0.695305955669133,0.578727661391115,0.412085900803307,0.294397840268795,0,0.532427418478012,0.476872379894642,0.726732083161643,0.564656282491984,0.338458431566706,0.548783918618318,0,0.271608227691724,0,0.118635018124174,0.492522411877817,0.409231043169689,0.309873682371932,0,0.999242311751784,0.467863216890817,0.214871054048298,0.57386499620653,0.220591419119515,0|short_description=p@chr11:120209493..120209503,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:120209493..120209503,- | |||
|description=CAGE_peak_at_chr11:120209493..120209503,- | |||
|id=chr11:120209493..120209503,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,2.38e-08,3;CL:0002494,7.00e-08,3;CL:0000737,7.00e-08,3;CL:0000746,7.00e-08,3;CL:0000513,7.00e-08,3;CL:0000117,7.45e-08,23;CL:0000337,7.45e-08,23;CL:0000393,3.49e-07,39;CL:0000211,3.49e-07,39;CL:0002611,6.66e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!3.32e-08!34;UBERON:0001049!3.34e-08!52;UBERON:0005068!3.34e-08!52;UBERON:0006241!3.34e-08!52;UBERON:0007135!3.34e-08!52;UBERON:0002346!3.28e-07!71;UBERON:0003075!3.28e-07!71;UBERON:0007284!3.28e-07!71;UBERON:0004121!3.30e-07!102;UBERON:0000924!3.30e-07!102;UBERON:0006601!3.30e-07!102;UBERON:0000073!4.47e-07!75;UBERON:0001016!4.47e-07!75;UBERON:0001017!7.01e-07!73;UBERON:0005743!7.01e-07!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,1.30e-13,5;UBERON:0002315,1.30e-13,5;UBERON:0002240,2.79e-11,6;UBERON:0005174,2.79e-11,6;UBERON:0001137,2.79e-11,6;UBERON:0002020,1.15e-08,34;UBERON:0005631,1.89e-08,3;UBERON:0000478,1.89e-08,3;UBERON:0000158,1.89e-08,3;UBERON:0002257,2.38e-08,3;UBERON:0002256,6.66e-07,2 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,0.30246421130683,0,0.33575854382378,0,0.387369970324729,0.140788722151667,1.17032263160997,0,0.0797721589953364,0.856003649656029,0.524522414513984,0,0,0,0.157731082679119,0,0.42438965179803,0.595303031057488,0,0.261199789138935,0.159992422793407,0,0.57423196411502,0.86152399231815,0,0,0.252030129759931,0,0,0,0,0,0,0,1.25559489221072,0.7813353445238,1.57057123192139,0.588231488031014,1.36609096991689,3.39857247121808,0.251793635951155,0.405507724878058,0.367093504323363,0.782391344348039,0.436050312760893,1.09843091367236,1.55543919259427,0.419959264876088,0,0.167782606057736,1.45072428402269,0.672187598284928,1.28629718017973,1.43266719969378,1.54701627683233,1.01158230429799,0.528990979272033,3.1691570175309,2.03306719241479,1.77858959222228,2.2497492932035,0,0.7104801149461,0.299600110518405,0,0.207379224616955,0,0,5.99867067247988,3.75476519617743,0.367472397644862,0.383381884072945,0.919218786610021,0,0.766124028511126,0.768032666281217,1.84640802822271,3.20206752608434,0.52091337055676,0.558365998002762,0.56276261003168,0.45839474333043,2.94628585473668,2.70506193518296,1.1183966749518,0.302904773332736,0.453429360640713,0.289864488701678,0,0,0,0,0,0.280888840263504,0.340860645156116,0.779358013808606,0.35333957451034,0.422530259330042,0,0,0,0.432982082022428,0,0.505524445014783,0,0.517875767294343,0.148442139064825,0,0.608930956624282,0.461230994512117,0.301445281105245,0.587943535678524,0,3.46072954828123,0.722996784599558,0,0,0.220841518460394,0,0,0.292780797011547,0.41889341362691,0,0.11981512450592,0,0.508280908292259,1.19832511523858,0.915001205637253,2.89005009859588,0.347648640384553,1.27857728665165,0.20778804455956,0.162241263067758,0.305518091550949,0.124406970610093,0.252722758433675,0,0.130120442962704,0.229902104433473,0.540186389416048,0,0.408218994907967,0.2562274405697,0.468508622798644,0.258703370739016,0,0.189106080167819,0.351902248327898,0,0,1.39300866608867,0.823128545631774,0.199034266818493,0,0.772043721344145,0,0,0.234526059981096,0.36012412292203,0,0,0.154267112887378,0,0,0.116765342367169,0,0.164167464079095,0.162137619091711,0.292399974850665,0,0,0.210289948564127,0.92614151141356,0.330418782983798,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0,0,0,0,0,0.597423819763102,0,0,0,0,0.193952487167626,0.140271639780637,0.126473074248515,0.442830443938806,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0.169745085775188,0.234690248288502,0,0.476087281772027,0.975668239288994,0.157635144106191,0.664394068946325,0.318909537314974,0.327726629431476,0.172684981865896,0,0,0,0,0.551873492609465,0,0.703270119553219,0.163934945376675,0,0.315508219416257,0.780877488593277,0,0,0.445597348164788,0,0,0,0,0.642642632843614,0,0,0,0.329940245945071,0,0,0,0,0,0.307435147943927,0,0.363533729477506,0,0,0,0,0,0,0.258717367565509,0.214337035031592,0.354680467284547,0.356737635204141,0.658196082408484,0.304464949114599,1.87737366450968,1.27099242518292,0.661585194164886,0.49465875882444,0.645857706783622,0.180938774784468,0.119372344003136,0.164140899745061,0,0.741701208042039,0,0.206386867963223,0.185194527369712,0,0,0,0.339956859987711,0.559805809294632,0.552799895217695,0,0,0,0.648032044930808,0,0.218362563746178,0.404593039154462,0,0.26175594198403,0.129614973291793,0,3.94585057078933,0,0,0.194451188344048,0,0.168956125490778,0.234714477291508,0.13020438484395,0.419437377702843,2.17425708743405,2.01621004380506,0.316011120628178,0,0,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0.201932899896295,0.228620419965,0,0.0974578807397524,0.577271049841977,0.233753804363138,1.13365191807606,0.221985953374065,0.717710852875806,0.839423081820392,0,0.187682475451182,0.183151624267265,0.214368379079066,0,0.564751842617067,0.460325236507177,0.572895513439397,0.515559547031063,1.37016503954128,0,0,0.45032120322422,1.81256963593682,0.51776031175182,0.207574695168353,0,0.170733605754134,0.243106717068294,0.419226325255965,0,0.44449345560323,0.618105171716683,0.64183841918363,0.505394423527595,0.760437899670719,0.943131706930381,0.468207537349412,0.256100609619477,0.516919220600519,0.476293691283074,0.695305955669133,0.578727661391115,0.412085900803307,0.294397840268795,0,0.532427418478012,0.476872379894642,0.726732083161643,0.564656282491984,0.338458431566706,0.548783918618318,0,0.271608227691724,0,0.118635018124174,0.492522411877817,0.409231043169689,0.309873682371932,0,0.999242311751784,0.467863216890817,0.214871054048298,0.57386499620653,0.220591419119515,0 | |||
|short_description=p@chr11:120209493..120209503,- | |||
}} |
Latest revision as of 14:52, 5 August 2015
Short description: | p@chr11:120209493..120209503, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:120209493..120209503, - |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 2.38e-08 | 3 |
cardiocyte | 7.00e-08 | 3 |
striated muscle cell | 7.00e-08 | 3 |
cardiac muscle cell | 7.00e-08 | 3 |
cardiac muscle myoblast | 7.00e-08 | 3 |
CNS neuron (sensu Vertebrata) | 7.45e-08 | 23 |
neuroblast (sensu Vertebrata) | 7.45e-08 | 23 |
electrically responsive cell | 3.49e-07 | 39 |
electrically active cell | 3.49e-07 | 39 |
neuron of the dorsal spinal cord | 6.66e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 1.30e-13 | 5 |
gray matter of spinal cord | 1.30e-13 | 5 |
spinal cord | 2.79e-11 | 6 |
dorsal region element | 2.79e-11 | 6 |
dorsum | 2.79e-11 | 6 |
gray matter | 1.15e-08 | 34 |
extraembryonic membrane | 1.89e-08 | 3 |
extraembryonic structure | 1.89e-08 | 3 |
membranous layer | 1.89e-08 | 3 |
ventral horn of spinal cord | 2.38e-08 | 3 |
dorsal horn of spinal cord | 6.66e-07 | 2 |