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FFCP PHASE1:Mm9::chr13:115880331..115880449,-: Difference between revisions

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{{FFCP|EntrezGene=105083|HGNC=|UniProt=Q80X73|association_with_transcript=0bp_to_ENSMUST00000109226,NM_134058,uc007ryb.2_5end|description=CAGE_peak_1_at_Pelo_5end|id=chr13:115880331..115880449,-|ontology_enrichment_celltype=CL:0000548!1.25e-09!115;CL:0000004!1.25e-09!115;CL:0000255!1.25e-09!115;CL:0002371!4.20e-08!118;CL:0002321!4.27e-07!70;CL:0000220!4.27e-07!70;CL:0000144!7.75e-07!121;CL:0000012!7.75e-07!121|ontology_enrichment_celltype_v019_2=CL:0002321,4.27e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!3.27e-08!47;UBERON:0002107!1.41e-07!22;UBERON:0007499!1.41e-07!22;UBERON:0006925!1.41e-07!22;UBERON:0009497!1.41e-07!22;UBERON:0000015!1.41e-07!22;UBERON:0002423!1.41e-07!22;UBERON:0006235!1.41e-07!22;UBERON:0008835!1.41e-07!22;UBERON:0003894!1.41e-07!22;UBERON:0004161!1.41e-07!22;UBERON:0008836!1.41e-07!22;UBERON:0009854!3.01e-07!23;UBERON:0009856!3.01e-07!23;UBERON:0002365!6.47e-07!25;UBERON:0002330!6.47e-07!25|ontology_enrichment_uberon_v019_2=UBERON:0003914,3.27e-08,47;UBERON:0002107,1.41e-07,22;UBERON:0007499,1.41e-07,22;UBERON:0006925,1.41e-07,22;UBERON:0009497,1.41e-07,22;UBERON:0000015,1.41e-07,22;UBERON:0002423,1.41e-07,22;UBERON:0006235,1.41e-07,22;UBERON:0008835,1.41e-07,22;UBERON:0003894,1.41e-07,22;UBERON:0004161,1.41e-07,22;UBERON:0008836,1.41e-07,22;UBERON:0009854,3.01e-07,23;UBERON:0009856,3.01e-07,23;UBERON:0002365,6.47e-07,25;UBERON:0002330,6.47e-07,25|phase1_expression=16.4953312517938,27.2200817958702,34.1249429542152,18.7527811010235,16.5295590882295,33.575854382378,23.127651418957,14.4618122254565,16.04991432529,11.2350972634557,22.0871179010901,24.6495971295589,15.2368649638773,13.2004807652686,30.9792078488566,35.4331717932195,44.0723983220732,14.1957974411207,13.4372144933624,20.7950929381035,17.2637879006672,16.9787526553514,16.4555867157529,20.7990149631429,19.2703796096423,31.0085260622111,27.1380057580217,28.6576739472232,17.8622014288991,19.6583501212746,26.8293917892919,65.408159366342,76.8830984480713,31.6963362030877,17.0422455653252,23.1066157048304,16.3335485009895,5.4409111995798,6.2506827561904,5.23523743973798,3.52938892818609,4.09827290975067,4.36959317728038,30.4670299500897,28.5882946039031,33.0384153891027,71.1976123356716,44.4771319016111,76.6704777743307,56.5791006306165,35.4165646712167,37.3756667348926,18.456086666351,7.97898356212479,24.5348473373999,21.0952737549477,19.4842739158355,26.814948798427,29.3358868246417,29.6234948392338,22.8179305262225,53.876280598992,51.5790981744461,39.5955875603816,36.5880554149781,38.3659262070894,46.7376172408711,69.1592949578798,22.0858874217057,21.1959323180754,21.0324961351382,36.5633260036869,32.4676755198872,18.8635830791029,21.6610764501214,21.1420320920305,22.0231761998777,28.0912143787413,26.4203237200739,23.4757592159745,25.6165402086747,30.7338888628488,30.1517638921491,28.7008931116157,22.7669389187447,27.6950870345248,28.6167078406197,25.7231235238915,15.5238696333027,17.3058872644539,54.2046593872137,53.346280372846,116.275098064025,40.4777393728363,36.3874793770695,50.1790113549016,26.5439954049011,19.5994870964766,24.6796704372725,22.2603931941514,19.1547050896285,38.4979432242953,91.7298862943925,142.213340630666,12.123498296628,18.7486300451573,19.2099289105618,29.0027054486412,20.9739685754209,19.1490359393624,30.0129615305415,25.879565656532,20.2941637585331,19.7446659123936,19.519725384527,20.1066546127481,24.2251068379686,14.1707369781513,33.6152009740952,24.7503280419536,22.3049933644997,25.6983884161668,20.5030937339934,21.3729981818429,19.2690970268379,26.3120766864849,24.5621005237137,28.7953310876836,20.9665874670557,20.5213175984607,17.3850229071078,19.9790419859454,17.3824320192276,17.3886510984625,15.7918913865266,17.5220564113178,20.7752302254645,20.1539292388351,18.9542068825256,15.3622554797126,26.1542090355034,25.289231487682,21.0672691872259,14.7690721479001,13.1310443362063,17.039124797885,17.3348190435498,15.0047955028629,21.9879352791499,26.2857451433269,26.0407663762644,33.5369470614189,16.9608822027615,19.1538691587192,17.9030458674911,23.4860434845822,35.812872552975,25.9921386185862,23.5855704498342,41.0109029620294,37.0551174770132,36.912722599508,34.0912419242703,25.9728785906573,27.4595460939533,26.2763357567961,30.0466209567573,25.9219060055116,29.456213134513,25.774291860418,21.888578577381,22.3685980760758,20.1986106067767,19.3257243014935,17.4540657308226,21.6099685996497,13.5471701023357,38.6097827328775,26.8743195674395,24.8493238890669,21.2631311181454,19.5633018884642,17.3454874198999,17.690983228468,27.0481565080372,20.4226703857773,11.0587491872119,13.3300836267571,15.2071987952914,25.1669434423182,18.5878722892237,17.922714592893,40.5889308039595,24.2206846732625,22.5415471346161,19.7541788009955,22.4984885114446,21.1108817869859,15.3032419840703,18.5988786454299,17.7408562460754,21.9646951780805,40.0211046567651,43.8802628033327,32.2356751985653,35.5282137568069,37.3262623354845,30.3883221288045,29.027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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:105083
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q80X73
|association_with_transcript=0bp_to_ENSMUST00000109226,NM_134058,uc007ryb.2_5end
|cluster_id=chr13:115880331..115880449,-
|description=CAGE_peak_1_at_Pelo_5end
|id=chr13:115880331..115880449,-
|ontology_enrichment_celltype=CL:0000548!1.25e-09!115;CL:0000004!1.25e-09!115;CL:0000255!1.25e-09!115;CL:0002371!4.20e-08!118;CL:0002321!4.27e-07!70;CL:0000220!4.27e-07!70;CL:0000144!7.75e-07!121;CL:0000012!7.75e-07!121
|ontology_enrichment_celltype_v019_2=CL:0002321,4.27e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003914!3.27e-08!47;UBERON:0002107!1.41e-07!22;UBERON:0007499!1.41e-07!22;UBERON:0006925!1.41e-07!22;UBERON:0009497!1.41e-07!22;UBERON:0000015!1.41e-07!22;UBERON:0002423!1.41e-07!22;UBERON:0006235!1.41e-07!22;UBERON:0008835!1.41e-07!22;UBERON:0003894!1.41e-07!22;UBERON:0004161!1.41e-07!22;UBERON:0008836!1.41e-07!22;UBERON:0009854!3.01e-07!23;UBERON:0009856!3.01e-07!23;UBERON:0002365!6.47e-07!25;UBERON:0002330!6.47e-07!25
|ontology_enrichment_uberon_v019_2=UBERON:0003914,3.27e-08,47;UBERON:0002107,1.41e-07,22;UBERON:0007499,1.41e-07,22;UBERON:0006925,1.41e-07,22;UBERON:0009497,1.41e-07,22;UBERON:0000015,1.41e-07,22;UBERON:0002423,1.41e-07,22;UBERON:0006235,1.41e-07,22;UBERON:0008835,1.41e-07,22;UBERON:0003894,1.41e-07,22;UBERON:0004161,1.41e-07,22;UBERON:0008836,1.41e-07,22;UBERON:0009854,3.01e-07,23;UBERON:0009856,3.01e-07,23;UBERON:0002365,6.47e-07,25;UBERON:0002330,6.47e-07,25
|phase1_expression=16.4953312517938,27.2200817958702,34.1249429542152,18.7527811010235,16.5295590882295,33.575854382378,23.127651418957,14.4618122254565,16.04991432529,11.2350972634557,22.0871179010901,24.6495971295589,15.2368649638773,13.2004807652686,30.9792078488566,35.4331717932195,44.0723983220732,14.1957974411207,13.4372144933624,20.7950929381035,17.2637879006672,16.9787526553514,16.4555867157529,20.7990149631429,19.2703796096423,31.0085260622111,27.1380057580217,28.6576739472232,17.8622014288991,19.6583501212746,26.8293917892919,65.408159366342,76.8830984480713,31.6963362030877,17.0422455653252,23.1066157048304,16.3335485009895,5.4409111995798,6.2506827561904,5.23523743973798,3.52938892818609,4.09827290975067,4.36959317728038,30.4670299500897,28.5882946039031,33.0384153891027,71.1976123356716,44.4771319016111,76.6704777743307,56.5791006306165,35.4165646712167,37.3756667348926,18.456086666351,7.97898356212479,24.5348473373999,21.0952737549477,19.4842739158355,26.814948798427,29.3358868246417,29.6234948392338,22.8179305262225,53.876280598992,51.5790981744461,39.5955875603816,36.5880554149781,38.3659262070894,46.7376172408711,69.1592949578798,22.0858874217057,21.1959323180754,21.0324961351382,36.5633260036869,32.4676755198872,18.8635830791029,21.6610764501214,21.1420320920305,22.0231761998777,28.0912143787413,26.4203237200739,23.4757592159745,25.6165402086747,30.7338888628488,30.1517638921491,28.7008931116157,22.7669389187447,27.6950870345248,28.6167078406197,25.7231235238915,15.5238696333027,17.3058872644539,54.2046593872137,53.346280372846,116.275098064025,40.4777393728363,36.3874793770695,50.1790113549016,26.5439954049011,19.5994870964766,24.6796704372725,22.2603931941514,19.1547050896285,38.4979432242953,91.7298862943925,142.213340630666,12.123498296628,18.7486300451573,19.2099289105618,29.0027054486412,20.9739685754209,19.1490359393624,30.0129615305415,25.879565656532,20.2941637585331,19.7446659123936,19.519725384527,20.1066546127481,24.2251068379686,14.1707369781513,33.6152009740952,24.7503280419536,22.3049933644997,25.6983884161668,20.5030937339934,21.3729981818429,19.2690970268379,26.3120766864849,24.5621005237137,28.7953310876836,20.9665874670557,20.5213175984607,17.3850229071078,19.9790419859454,17.3824320192276,17.3886510984625,15.7918913865266,17.5220564113178,20.7752302254645,20.1539292388351,18.9542068825256,15.3622554797126,26.1542090355034,25.289231487682,21.0672691872259,14.7690721479001,13.1310443362063,17.039124797885,17.3348190435498,15.0047955028629,21.9879352791499,26.2857451433269,26.0407663762644,33.5369470614189,16.9608822027615,19.1538691587192,17.9030458674911,23.4860434845822,35.812872552975,25.9921386185862,23.5855704498342,41.0109029620294,37.0551174770132,36.912722599508,34.0912419242703,25.9728785906573,27.4595460939533,26.2763357567961,30.0466209567573,25.9219060055116,29.456213134513,25.774291860418,21.888578577381,22.3685980760758,20.1986106067767,19.3257243014935,17.4540657308226,21.6099685996497,13.5471701023357,38.6097827328775,26.8743195674395,24.8493238890669,21.2631311181454,19.5633018884642,17.3454874198999,17.690983228468,27.0481565080372,20.4226703857773,11.0587491872119,13.3300836267571,15.2071987952914,25.1669434423182,18.5878722892237,17.922714592893,40.5889308039595,24.2206846732625,22.5415471346161,19.7541788009955,22.4984885114446,21.1108817869859,15.3032419840703,18.5988786454299,17.7408562460754,21.9646951780805,40.0211046567651,43.8802628033327,32.2356751985653,35.5282137568069,37.3262623354845,30.3883221288045,29.0273471030819,34.8112326315481,33.5619919424323,27.1815799056201,110.701519026063,22.3284568601102,19.6583734062173,26.7733610623938,32.1121370204223,13.0259750768109,14.041242452662,29.9396430597366,18.4150423379489,18.6719594352707,17.6017686216377,18.7607008334834,19.0434912708811,19.7084984336377,12.9260818167077,14.8381342064679,14.1914744105164,9.83179888294428,9.67035898449015,11.5719246865209,30.1582567878545,18.4927932498361,26.555270743028,16.5562047782839,21.9954308283275,18.7538698547525,15.4098848654075,16.915552122693,18.6149849455591,16.7888660047555,17.0184484208911,32.2607877235945,26.7358408898873,34.8184132870264,31.9800454323167,30.3946092227764,22.5314033429518,15.7447445046685,20.0135520143659,26.7098405500883,21.9897395127328,15.8371318053634,83.6294371541766,34.2320696978524,26.3021494559333,38.0982261106914,45.476491503639,31.3583850902806,22.4832615056352,28.7191646287229,23.1723295950069,44.8772196268859,29.5172104009997,45.3796390292022,19.4050575279659,22.5076367539138,28.5882691159887,28.7211626942334,23.2315706071378,20.5124140242381,22.3786668018885,29.8375650132307,25.8138878870081,30.9274823461177,18.3038570385618,34.6261131177108,13.5630118424561,17.4907482291652,16.3540111284297,12.9671310798598,23.3184669303881,23.3635880533242,33.4906926363791,33.8474463459685,29.0755407970447,25.9948470666474,31.4396723758358,24.0217081866849,13.4282959695146,9.93655311497972,12.2997976685937,20.0480829783174,32.1081033484852,18.7053909756701,18.1448972580626,17.7725051612298,17.4690050996942,14.5653494095606,14.3817012962085,13.0877970992015,11.5357326229696,24.2322332103901,14.0923234671048,28.109110656268,25.3151490399359,23.7230449779738,25.444485225113,17.4024809255502,17.1341568422801,21.8743366537836,17.406651174668,14.4950472495604,11.8092302565725,18.9606672376907,31.6251335852656,23.6235201479103,26.5038478874702,22.1993102627677,22.8483557998455,14.1830630433563,14.7689527174577,13.8324036428962,15.469981750965,13.8131873637472,15.1059715146616,16.356013078856,12.3889516312463,13.6038230169127,46.8390361619277,49.6117627050401,38.1098079146458,14.6824091464465,24.774086759556,14.4689783171139,18.2213122217206,23.5738888896621,27.6728402882363,19.7939851698086,18.9055519435001,19.4194096048367,19.8673930733486,25.6833925112498,20.925697507186,22.9663813644352,14.9536994964788,25.888015587591,28.3339458904802,38.306387846499,24.2441720170871,24.5537784238977,33.7477191831052,28.8634308266522,19.5577120465421,16.2767695218726,18.6133141563253,17.9415020352296,17.7435509923168,17.5422497489051,18.1664524491572,18.2471684353877,17.2880761556396,15.2413981210584,17.7303018695629,17.3618298417335,16.8955219329356,20.6078488188156,12.343293085875,15.9728225543404,19.7902037656276,18.0229556624087,16.4691415726829,17.0921507941187,14.2683818840763,16.8364615320219,18.4693594830372,12.906272248128,15.7784574105152,16.6472575214702,21.2800142448238,15.3387472774106,21.798447040869,26.7297318393602,16.1412809827332,19.9830080264917,18.9375448748155,18.7502706251588,20.6362373702175
|short_description=p1@Pelo
}}

Revision as of 15:35, 5 August 2015

Short description:p1@Pelo
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pelo_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000109226, NM_134058, uc007ryb.2_5end
EntrezGene:105083
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pelo

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G716.50
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I527.22
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I634.12
CD326+ enterocyte, pool1.CNhs13542.11848-124I318.75
CD326+ enterocyte, pool2.CNhs13197.11849-124I416.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I733.58
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I823.13
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E914.46
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E716.05
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F211.24
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E622.09
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F124.65
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E415.24
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E813.20
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A130.98
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A335.43
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A544.07
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A214.20
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A413.44
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A620.80
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A317.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H216.98
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I916.46
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D120.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D219.27
GP2+ M cell, pool1.CNhs13228.11845-124H931.01
GP2+ M cell, pool2.CNhs13231.11846-124I127.14
GP2+ M cell, pool3.CNhs13240.11847-124I228.66
Ileum epithelium, pool1.CNhs13199.10252-104B917.86
Ileum epithelium, pool2.CNhs13232.10253-104C119.66
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C826.83
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I365.41
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G676.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F517.04
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F623.11
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F716.33
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H16.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.10
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H44.37
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D830.47
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D928.59
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B333.04
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B771.20
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C244.48
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B876.67
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C356.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C435.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C437.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A218.46
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.98
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A124.53
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C121.10
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E119.48
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C526.81
Mouse Granule cells, donor1.CNhs12131.11713-123C329.34
Mouse Granule cells, donor2.CNhs12357.11731-123E329.62
Mouse Granule cells, donor3.CNhs12108.11636-122C722.82
Mouse Meningeal cells, donor1.CNhs12132.11716-123C653.88
Mouse Meningeal cells, donor3.CNhs12109.11639-122D151.58
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C739.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E736.59
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D238.37
Mouse Microglia, donor1.CNhs12629.11718-123C846.74
Mouse Microglia, donor2.CNhs12634.11736-123E869.16
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D522.09
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F521.20
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D921.03
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F136.56
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D532.47
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D218.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F221.66
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D621.14
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D322.02
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F328.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D726.42
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D423.48
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F425.62
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D830.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E430.15
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E528.70
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I622.77
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D627.70
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F628.62
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E125.72
Mouse Schwann, donor1.CNhs12507.11728-123D915.52
Mouse Schwann, donor2.CNhs12573.11746-123F917.31
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G354.20
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F753.35
Mouse hepatocyte, donor1.CNhs13078.11714-123C4116.28
Mouse hepatocyte, donor3.CNhs12615.11637-122C840.48
Mouse hepatocyte, donor6.CNhs13090.11822-124F436.39
Mouse hepatocyte, donor8.CNhs13091.11824-124F650.18
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A726.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I719.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E324.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I822.26
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G619.15
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H138.50
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I891.73
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6142.21
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G112.12
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G218.75
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G319.21
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B629.00
accessory axillary lymph node, adult.CNhs10475.1063-29H920.97
adrenal gland, adult.CNhs10508.49-24D719.15
adrenal gland, embryo E14.CNhs11038.406-44C530.01
adrenal gland, embryo E16.CNhs11004.1254-43D625.88
adrenal gland, embryo E17.CNhs11043.1263-45I120.29
adrenal gland, embryo E18.CNhs11026.1262-18F519.74
adrenal gland, neonate N00.CNhs11191.1311-23C119.52
adrenal gland, neonate N25.CNhs11223.1377-27I320.11
amnion, adult pregnant day17.5.CNhs10488.583-22A824.23
aorta, adult.CNhs10498.46-23H114.17
bone (os femoris), adult.CNhs10483.56-12G233.62
bone (os femoris), neonate N02.CNhs11227.1985-43F524.75
bone (os femoris), neonate N16.CNhs11225.1525-43A622.30
bone (os femoris), neonate N20.CNhs11195.1350-25C325.70
cecum, adult.CNhs10467.37-13H420.50
cerebellum, adult.CNhs10494.15-8B221.37
cerebellum, neonate N30.CNhs11135.1395-42I219.27
colon, adult.CNhs10468.36-18H726.31
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C724.56
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D128.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D420.97
corpora quadrigemina, adult.CNhs10501.16-22A420.52
corpus striatum, adult.CNhs10487.19-21D817.39
corpus striatum, neonate N00.CNhs11226.630-43F119.98
cortex, adult.CNhs10473.12-14D517.38
cortex, neonate N30.CNhs11107.1392-42F217.39
diencephalon, adult.CNhs10482.20-12F215.79
diencephalon, neonate N30.CNhs11201.1388-42B217.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B120.78
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A220.15
epididymis, adult.CNhs10490.58-23B218.95
eyeball, adult.CNhs10484.31-12G415.36
eyeball, embryo E12.CNhs11016.345-16C626.15
eyeball, embryo E14.CNhs10521.399-16E225.29
eyeball, embryo E15.CNhs10593.426-16C921.07
eyeball, embryo E17.CNhs11023.1261-18D414.77
eyeball, neonate N00.CNhs11207.633-15C613.13
eyeball, neonate N01.CNhs11140.1532-43E717.04
eyeball, neonate N02.CNhs11205.1551-44G817.33
eyeball, neonate N16.CNhs11188.777-19A215.00
forelimb, embryo E11.CNhs10596.335-25E221.99
forelimb, embryo E12.CNhs10600.359-14H226.29
forelimb, embryo E13.CNhs10589.384-1E226.04
forelimb, embryo E14.CNhs10577.413-26A833.54
forelimb, embryo E15.CNhs11007.437-20E716.96
forelimb, embryo E17.CNhs10598.1517-43C419.15
forelimb, embryo E18.CNhs11008.1520-43B517.90
gonad, embryo E13.CNhs11044.1564-45I623.49
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C835.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D225.99
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D523.59
heart, embryo E11.CNhs10586.331-24E941.01
heart, embryo E12.CNhs11015.353-12F537.06
heart, embryo E13.CNhs11013.376-3I936.91
heart, embryo E14.CNhs10597.403-26D434.09
heart, embryo E15.CNhs11017.431-16C825.97
heart, embryo E16.CNhs11021.457-17C627.46
heart, embryo E17.CNhs11025.479-18E526.28
heart, embryo E18.CNhs11030.1283-20G330.05
heart, neonate N00.CNhs11213.639-21E325.92
heart, neonate N03.CNhs11221.1349-25I229.46
heart, neonate N10.CNhs11118.749-24G125.77
heart, neonate N16.CNhs11209.782-15G121.89
heart, neonate N20.CNhs11127.821-26I622.37
heart, neonate N25.CNhs11196.1351-25D320.20
heart, neonate N30.CNhs11202.1390-42D219.33
hippocampus, adult.CNhs10478.13-16E817.45
hippocampus, neonate N00.CNhs11228.627-43G121.61
intestinal mucosa, adult.CNhs10506.860-29I313.55
intestine, adult.CNhs10496.178-9A338.61
intestine, embryo E12.CNhs11019.1251-16I526.87
intestine, embryo E13.CNhs11010.381-16D524.85
intestine, embryo E15.CNhs10602.976-16D821.26
intestine, embryo E16.CNhs10585.463-22H419.56
intestine, embryo E17.CNhs10582.482-18D317.35
intestine, embryo E18.CNhs10526.1289-20F717.69
intestine, neonate N00.CNhs11126.644-26D127.05
intestine, neonate N01.CNhs11192.1322-23E920.42
intestine, neonate N06.CNhs11102.688-20B811.06
intestine, neonate N07.CNhs11095.720-20F213.33
intestine, neonate N10.CNhs11098.755-23A515.21
intestine, neonate N20.CNhs11187.827-18D125.17
intestine, neonate N25.CNhs11121.1352-25E318.59
intestine, neonate N30.CNhs11131.1384-42G117.92
kidney, embryo E14.CNhs10606.411-4I940.59
kidney, embryo E15.CNhs10997.434-16F824.22
kidney, embryo E16.CNhs10584.464-22A522.54
kidney, embryo E17.CNhs11028.483-18I219.75
kidney, embryo E18.CNhs11001.1288-20C722.50
kidney, neonate N00.CNhs11214.646-21G721.11
kidney, neonate N10.CNhs11206.758-6D515.30
kidney, neonate N20.CNhs11113.832-19I118.60
kidney, neonate N25.CNhs11122.1353-25F317.74
kidney, neonate N30.CNhs11203.1385-42H121.96
liver, adult pregnant day01.CNhs10466.508-5B240.02
liver, embryo E12.CNhs10601.355-15F843.88
liver, embryo E13.CNhs10524.378-3H632.24
liver, embryo E14.CNhs10594.409-16E135.53
liver, embryo E15.CNhs10520.433-16D737.33
liver, embryo E16.CNhs10523.462-17F530.39
liver, embryo E17.CNhs10510.481-18A329.03
liver, embryo E18.CNhs10579.499-43G434.81
liver, neonate N00.CNhs11117.641-24F433.56
liver, neonate N03.CNhs11123.1345-25G227.18
liver, neonate N06.CNhs11101.684-20A8110.70
liver, neonate N07.CNhs11103.716-20H222.33
liver, neonate N10.CNhs11115.751-24B919.66
liver, neonate N20.CNhs11220.823-25A326.77
liver, neonate N25.CNhs11198.1368-26H132.11
liver, neonate N30.CNhs11106.1382-42D113.03
lung, adult.CNhs10474.28-22B114.04
lung, embryo E12.CNhs10522.354-16G229.94
lung, embryo E14.CNhs10604.404-26F818.42
lung, embryo E15.CNhs11020.432-17C518.67
lung, embryo E16.CNhs10998.458-17B617.60
lung, embryo E17.CNhs10605.480-44A618.76
lung, embryo E18.CNhs10583.1287-20I619.04
lung, neonate N00.CNhs11224.640-42C619.71
lung, neonate N06.CNhs11212.683-20E512.93
lung, neonate N07.CNhs11111.715-19A314.84
lung, neonate N10.CNhs11219.750-23E614.19
lung, neonate N20.CNhs11109.822-18A49.83
lung, neonate N25.CNhs11119.1359-25C79.67
lung, neonate N30.CNhs11133.1394-42H211.57
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A130.16
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A118.49
mammary gland, adult lactating day02.CNhs10480.595-22B626.56
mammary gland, adult pregnant day19.CNhs10476.588-5H216.56
medulla oblongata, adult.CNhs10477.17-12C222.00
medulla oblongata, neonate N30.CNhs11200.1396-42A318.75
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C715.41
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C216.92
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E118.61
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E216.79
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E317.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D732.26
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D826.74
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D934.82
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D431.98
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D530.39
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D622.53
olfactory brain, adult.CNhs10489.18-22I915.74
ovary, adult.CNhs10507.91-2I720.01
ovary, embryo E18.CNhs11040.505-44H726.71
ovary, neonate N00.CNhs11217.1299-22I421.99
oviduct, adult pregnant day01.CNhs10500.988-6G615.84
pancreas, adult.CNhs10486.34-16E483.63
pancreas, embryo E14.CNhs11012.405-44F434.23
pancreas, embryo E15.CNhs11042.1556-45F226.30
pancreas, embryo E16.CNhs11003.460-26E538.10
pancreas, embryo E17.CNhs10599.1558-45G345.48
pancreas, embryo E18.CNhs10580.1535-43I731.36
pancreas, neonate N00.CNhs11105.645-26G922.48
pancreas, neonate N01.CNhs11138.1531-43D728.72
pancreas, neonate N02.CNhs11139.1539-43D823.17
pancreas, neonate N16.CNhs11136.787-43B644.88
pancreas, neonate N25.CNhs11094.1555-45E229.52
pancreas, neonate N30.CNhs11182.1548-44H545.38
pituitary gland, adult.CNhs10493.21-1G819.41
pituitary gland, embryo E12.CNhs11018.346-16E622.51
pituitary gland, embryo E13.CNhs11009.370-44C728.59
pituitary gland, embryo E14.CNhs11037.398-44A528.72
pituitary gland, embryo E15.CNhs10592.427-16B923.23
pituitary gland, embryo E16.CNhs11036.449-43F620.51
pituitary gland, embryo E17.CNhs11039.1265-44F522.38
pituitary gland, neonate N00.CNhs11190.1308-22E929.84
placenta, adult pregnant day10.CNhs10472.539-13I725.81
placenta, adult pregnant day17.CNhs10464.577-18G330.93
prostate, adult.CNhs10470.859-1F818.30
skin, adult.CNhs10492.30-1C334.63
skin, neonate N00.CNhs11124.650-25G413.56
skin, neonate N03.CNhs11215.662-22H317.49
skin, neonate N06.CNhs11097.693-20I516.35
skin, neonate N10.CNhs11108.762-6C412.97
small intestine, neonate N16.CNhs11114.790-21I123.32
spinal cord, adult.CNhs10505.24-13C923.36
spleen, adult.CNhs10465.25-2G233.49
spleen, embryo E16.CNhs11035.461-43C133.85
spleen, embryo E18.CNhs11011.1271-21F229.08
spleen, neonate N10.CNhs11116.752-24D125.99
spleen, neonate N20.CNhs11112.824-19H131.44
spleen, neonate N25.CNhs11099.1354-25G324.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C613.43
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C99.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D312.30
stomach, adult.CNhs10503.33-1H620.05
stomach, embryo E12.CNhs10588.356-43E332.11
stomach, embryo E15.CNhs10603.1252-16G818.71
stomach, embryo E16.CNhs11022.459-17D418.14
stomach, embryo E17.CNhs11006.1035-18D517.77
stomach, embryo E18.CNhs10999.1286-20C617.47
stomach, neonate N03.CNhs11193.1340-24B814.57
stomach, neonate N07.CNhs11210.718-18A914.38
stomach, neonate N25.CNhs11104.1355-25E413.09
stomach, neonate N30.CNhs11134.1386-42I111.54
submandibular gland, adult.CNhs10469.59-29C124.23
testis, adult.CNhs10504.57-7G514.09
testis, embryo E13.CNhs11031.389-23F528.11
testis, embryo E15.CNhs11034.443-27C525.32
testis, embryo E16.CNhs11033.470-26G523.72
testis, embryo E17.CNhs11029.486-18I525.44
testis, embryo E18.CNhs11027.503-18G517.40
testis, neonate N00.CNhs11189.1300-22B717.13
testis, neonate N07.CNhs11222.726-26I421.87
testis, neonate N10.CNhs11204.763-44D917.41
testis, neonate N20.CNhs11110.839-18H314.50
testis, neonate N30.CNhs11130.1391-42E211.81
thymus, adult.CNhs10471.38-12B518.96
thymus, embryo E14.CNhs11041.402-44I431.63
thymus, embryo E15.CNhs11005.430-45I223.62
thymus, embryo E16.CNhs11002.456-26C526.50
thymus, embryo E17.CNhs10581.478-18C122.20
thymus, embryo E18.CNhs10595.1273-19G422.85
thymus, neonate N02.CNhs11181.1541-43F814.18
thymus, neonate N03.CNhs11137.2104-43C714.77
thymus, neonate N06.CNhs11197.681-26C413.83
thymus, neonate N07.CNhs11211.713-19D315.47
thymus, neonate N10.CNhs11194.748-24E413.81
thymus, neonate N20.CNhs11186.820-7A215.11
thymus, neonate N25.CNhs11125.1362-25G716.36
thymus, neonate N30.CNhs11132.1393-42G212.39
tongue, adult.CNhs10499.32-1B413.60
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H346.84
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F749.61
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G538.11
urinary bladder, adult.CNhs10481.879-12E414.68
uterus, adult pregnant day19.CNhs10497.590-15F524.77
uterus, adult.CNhs10509.92-27E514.47
vagina, adult.CNhs10502.89-27D518.22
vesicular gland, adult.CNhs10491.51-27F823.57
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A127.67
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A219.79
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A318.91
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D719.42
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A419.87
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A525.68
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A620.93
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A722.97
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.95
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A925.89
whole body, embryo E11.CNhs11014.324-5I828.33
whole body, embryo E12.CNhs10587.857-27C938.31
whole body, embryo E13.CNhs10512.372-23H224.24
whole body, embryo E14.5.CNhs10578.420-27D224.55
whole body, embryo E14.CNhs10519.395-14B133.75
whole body, embryo E16.CNhs10514.453-14F228.86
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G519.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G516.28
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G518.61
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G517.94
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G517.74
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G517.54
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G518.17
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G518.25
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G517.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G515.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G517.73
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G517.36
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G516.90
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G520.61
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G512.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G515.97
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G519.79
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G518.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G516.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G517.09
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G514.27
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G516.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G518.47
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G512.91
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G515.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G516.65
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G521.28
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G515.34
whole body, embryo E17.5.CNhs10513.490-9F921.80
whole body, embryo E17.CNhs10517.475-3I526.73
whole body, embryo E18.CNhs10516.493-3B316.14
whole body, neonate N00.CNhs10525.657-19C219.98
whole body, neonate N01.CNhs10576.659-23C618.94
whole body, neonate N06.CNhs10515.692-21D118.75
whole body, neonate N10.CNhs10518.761-6B420.64





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
embryonic cell4.27e-0770

Uber anatomy
Ontology termp-valuen
epithelial tube3.27e-0847
liver1.41e-0722
epithelial sac1.41e-0722
digestive gland1.41e-0722
epithelium of foregut-midgut junction1.41e-0722
anatomical boundary1.41e-0722
hepatobiliary system1.41e-0722
foregut-midgut junction1.41e-0722
hepatic diverticulum1.41e-0722
liver primordium1.41e-0722
septum transversum1.41e-0722
liver bud1.41e-0722
digestive tract diverticulum3.01e-0723
sac3.01e-0723
exocrine gland6.47e-0725
exocrine system6.47e-0725
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