FFCP PHASE1:Mm9::chr11:121169682..121169684,+: Difference between revisions
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|id=chr11:121169682..121169684,+
|short_description=p@chr11:121169682..121169684,+
|description=CAGE_peak_at_chr11:121169682..121169684,+
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:121169682..121169684,+ | |||
|description=CAGE_peak_at_chr11:121169682..121169684,+ | |||
|id=chr11:121169682..121169684,+ | |||
|ontology_enrichment_celltype=CL:0000117!8.01e-10!23;CL:0000337!8.01e-10!23;CL:0000055!1.99e-09!50;CL:0000221!2.03e-09!44;CL:0000133!2.03e-09!44;CL:0000393!4.99e-09!39;CL:0000211!4.99e-09!39;CL:0002319!6.19e-09!43;CL:0000540!3.70e-08!33;CL:0000047!3.70e-08!33;CL:0000031!3.70e-08!33;CL:0000404!3.70e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.33e-14,23;CL:0000337,3.33e-14,23;CL:0000393,1.33e-10,39;CL:0000211,1.33e-10,39;CL:0002612,2.41e-10,3;CL:0002613,9.30e-10,3;CL:0000540,9.51e-10,33;CL:0000047,9.51e-10,33;CL:0000031,9.51e-10,33;CL:0000404,9.51e-10,33;CL:0002319,1.55e-09,43;CL:0000221,2.66e-09,44;CL:0000133,2.66e-09,44;CL:0002321,4.67e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!5.18e-10!34;UBERON:0001049!3.49e-08!52;UBERON:0005068!3.49e-08!52;UBERON:0006241!3.49e-08!52;UBERON:0007135!3.49e-08!52;UBERON:0000073!4.75e-08!75;UBERON:0001016!4.75e-08!75;UBERON:0002791!6.06e-08!29;UBERON:0003528!6.06e-08!29;UBERON:0001893!6.06e-08!29;UBERON:0003080!2.14e-07!40;UBERON:0001017!2.57e-07!73;UBERON:0005743!2.57e-07!73;UBERON:0002616!2.80e-07!49;UBERON:0002346!2.93e-07!71;UBERON:0003075!2.93e-07!71;UBERON:0007284!2.93e-07!71;UBERON:0002780!3.15e-07!39;UBERON:0001890!3.15e-07!39;UBERON:0006240!3.15e-07!39;UBERON:0000955!6.22e-07!50;UBERON:0006238!6.22e-07!50;UBERON:0004121!6.76e-07!102;UBERON:0000924!6.76e-07!102;UBERON:0006601!6.76e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,3.16e-13,5;UBERON:0002315,3.16e-13,5;UBERON:0002020,3.24e-12,34;UBERON:0002240,4.04e-11,6;UBERON:0005174,4.04e-11,6;UBERON:0001137,4.04e-11,6;UBERON:0002257,2.41e-10,3;UBERON:0001049,8.62e-10,52;UBERON:0005068,8.62e-10,52;UBERON:0006241,8.62e-10,52;UBERON:0007135,8.62e-10,52;UBERON:0003076,1.63e-09,12;UBERON:0003057,1.63e-09,12;UBERON:0000073,2.15e-09,54;UBERON:0002420,3.18e-08,8;UBERON:0007245,3.18e-08,8;UBERON:0010009,3.18e-08,8;UBERON:0010011,3.18e-08,8;UBERON:0000454,3.18e-08,8;UBERON:0002346,8.82e-08,64;UBERON:0003075,8.82e-08,64;UBERON:0007284,8.82e-08,64 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0.233612640595526,0.258246646883153,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.17008658030214,0,0.261199789138935,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0,0.367093504323363,0,1.52617609466313,0.219686182734472,0.388859798148567,0.279972843250725,0,0,0,0,0,0.85960031981627,1.54701627683233,0,0,0.633831403506179,0.338844532069132,4.4464739805557,0.899899717281399,0.988866362566974,0.7104801149461,0,0,0.622137673850866,0.810035629990144,0.841299845405528,0,1.98781686856452,0,0.575072826109418,1.83843757322004,0,0.510749352340751,0.46081959976873,0.395658863190582,1.00636407962651,1.56274011167028,0.558365998002762,2.8138130501584,0.763991238884051,2.65165726926301,2.13557521198654,0.372798891650601,0.757261933331841,0.226714680320357,0,0,0,0,0,0,0,0,0.259786004602869,0,0.422530259330042,0,0,0,0.865964164044856,0.253359865475099,0,0.22836775943812,0,0,0.173485326766136,0,0,0.60289056221049,0.23517741427141,0.125666591329675,0.247194967734374,0,0,0.323533699894818,0,1.45462575940567,0,0,0,0.510914110417183,0.11981512450592,0.599902730993408,0,0.149790639404823,0,0.125654352112864,0.347648640384553,0.255715457330331,0,0,0,0.124406970610093,0.252722758433675,0,0.130120442962704,0,0,0.30140963567143,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0.540186184383045,0,0.393528463494808,0,0.232533944750408,0.268273401399619,0,0,0.164167464079095,0,0,0,0,0,0.205809224758569,0,0,0,0.696710015581316,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.189709611372772,0.147610147979602,0,0,0,0,0.196558995113203,0,0,0.241177159752417,0,0,0,0,0,0,0.312037673114561,0,0,0.482443521363367,0.184753190166605,0,0,0,0.234690248288502,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0.491804836130026,0,0,0.780877488593277,0,0.477937595905104,0.222798674082394,0,0,0,0,0,0,0.35613120733451,0,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0,0.356497378384721,0,0,1.03135543248187,0,0.18006109403131,0.517434735131018,0.214337035031592,0,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,0,0.170870880797853,0.206386867963223,0,0.188368457004691,0,0,0,0.139951452323658,0.138199973804424,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0.104859344425711,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,0.221985953374065,0,0,0,0,0,0,0.501572104035363,1.12950368523413,0,0.572895513439397,0.343706364687375,0,0,0,0,0.453142408984205,0.51776031175182,0.415149390336707,0,0,0,0.209613162627982,0.183843508450014,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0.824171801606613,0,0,0,0,0,0.282328141245992,0.0846146078916765,0.182927972872773,0.263069711437843,0.271608227691724,0,0,0,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0,0 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|phase1_expression=0.480446541314382,0,0,0,0,0,0.233612640595526,0.258246646883153,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.17008658030214,0,0.261199789138935,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0,0.367093504323363,0,1.52617609466313,0.219686182734472,0.388859798148567,0.279972843250725,0,0,0,0,0,0.85960031981627,1.54701627683233,0,0,0.633831403506179,0.338844532069132,4.4464739805557,0.899899717281399,0.988866362566974,0.7104801149461,0,0,0.622137673850866,0.810035629990144,0.841299845405528,0,1.98781686856452,0,0.575072826109418,1.83843757322004,0,0.510749352340751,0.46081959976873,0.395658863190582,1.00636407962651,1.56274011167028,0.558365998002762,2.8138130501584,0.763991238884051,2.65165726926301,2.13557521198654,0.372798891650601,0.757261933331841,0.226714680320357,0,0,0,0,0,0,0,0,0.259786004602869,0,0.422530259330042,0,0,0,0.865964164044856,0.253359865475099,0,0.22836775943812,0,0,0.173485326766136,0,0,0.60289056221049,0.23517741427141,0.125666591329675,0.247194967734374,0,0,0.323533699894818,0,1.45462575940567,0,0,0,0.510914110417183,0.11981512450592,0.599902730993408,0,0.149790639404823,0,0.125654352112864,0.347648640384553,0.255715457330331,0,0,0,0.124406970610093,0.252722758433675,0,0.130120442962704,0,0,0.30140963567143,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0.540186184383045,0,0.393528463494808,0,0.232533944750408,0.268273401399619,0,0,0.164167464079095,0,0,0,0,0,0.205809224758569,0,0,0,0.696710015581316,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.189709611372772,0.147610147979602,0,0,0,0,0.196558995113203,0,0,0.241177159752417,0,0,0,0,0,0,0.312037673114561,0,0,0.482443521363367,0.184753190166605,0,0,0,0.234690248288502,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0.491804836130026,0,0,0.780877488593277,0,0.477937595905104,0.222798674082394,0,0,0,0,0,0,0.35613120733451,0,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0,0.356497378384721,0,0,1.03135543248187,0,0.18006109403131,0.517434735131018,0.214337035031592,0,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,0,0.170870880797853,0.206386867963223,0,0.188368457004691,0,0,0,0.139951452323658,0.138199973804424,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0.104859344425711,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,0.221985953374065,0,0,0,0,0,0,0.501572104035363,1.12950368523413,0,0.572895513439397,0.343706364687375,0,0,0,0,0.453142408984205,0.51776031175182,0.415149390336707,0,0,0,0.209613162627982,0.183843508450014,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0.824171801606613,0,0,0,0,0,0.282328141245992,0.0846146078916765,0.182927972872773,0.263069711437843,0.271608227691724,0,0,0,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p@chr11:121169682..121169684,+ | |||
}} | }} |
Latest revision as of 15:58, 5 August 2015
Short description: | p@chr11:121169682..121169684, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:121169682..121169684, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.33e-14 | 23 |
neuroblast (sensu Vertebrata) | 3.33e-14 | 23 |
electrically responsive cell | 1.33e-10 | 39 |
electrically active cell | 1.33e-10 | 39 |
neuron of the ventral spinal cord | 2.41e-10 | 3 |
striatum neuron | 9.30e-10 | 3 |
neuron | 9.51e-10 | 33 |
neuronal stem cell | 9.51e-10 | 33 |
neuroblast | 9.51e-10 | 33 |
electrically signaling cell | 9.51e-10 | 33 |
neural cell | 1.55e-09 | 43 |
ectodermal cell | 2.66e-09 | 44 |
neurectodermal cell | 2.66e-09 | 44 |
embryonic cell | 4.67e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 3.16e-13 | 5 |
gray matter of spinal cord | 3.16e-13 | 5 |
gray matter | 3.24e-12 | 34 |
spinal cord | 4.04e-11 | 6 |
dorsal region element | 4.04e-11 | 6 |
dorsum | 4.04e-11 | 6 |
ventral horn of spinal cord | 2.41e-10 | 3 |
neural tube | 8.62e-10 | 52 |
neural rod | 8.62e-10 | 52 |
future spinal cord | 8.62e-10 | 52 |
neural keel | 8.62e-10 | 52 |
posterior neural tube | 1.63e-09 | 12 |
chordal neural plate | 1.63e-09 | 12 |
regional part of nervous system | 2.15e-09 | 54 |
basal ganglion | 3.18e-08 | 8 |
nuclear complex of neuraxis | 3.18e-08 | 8 |
aggregate regional part of brain | 3.18e-08 | 8 |
collection of basal ganglia | 3.18e-08 | 8 |
cerebral subcortex | 3.18e-08 | 8 |
neurectoderm | 8.82e-08 | 64 |
neural plate | 8.82e-08 | 64 |
presumptive neural plate | 8.82e-08 | 64 |