FFCP PHASE1:Mm9::chr6:4705579..4705590,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=144 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:4705579..4705590,+ | |||
|description=CAGE_peak_at_chr6:4705579..4705590,+ | |description=CAGE_peak_at_chr6:4705579..4705590,+ | ||
|id=chr6:4705579..4705590,+ | |id=chr6:4705579..4705590,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.98e-20,3;CL:0000351,2.98e-20,3;CL:0002679,2.74e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002369!1.95e-07!7;UBERON:0006858!1.95e-07!7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.91e-20,3;UBERON:0000478,1.91e-20,3;UBERON:0000158,1.91e-20,3;UBERON:0000358,2.98e-20,3;UBERON:0000307,2.98e-20,3;UBERON:0007010,2.98e-20,3;UBERON:0002369,1.96e-14,7;UBERON:0006858,1.96e-14,7;UBERON:0001987,4.53e-14,2;UBERON:0003124,4.53e-14,2;UBERON:0004340,4.53e-14,2;UBERON:0000305,4.65e-08,1;UBERON:0005795,1.78e-07,4;UBERON:0000995,1.78e-07,4;UBERON:0003064,2.45e-07,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0.65407546914134,0.219686182734472,0,0.279972843250725,0,0,0,0,0.514518872071894,0.573066879877513,0,0.606949382578793,0,0.633831403506179,0,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0.383381884072945,0,0,0,0.153606533256243,0,0.365950574409639,0,0.279182999001381,0,0.45839474333043,0.589257170947335,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.890652834388949,1.38788261412909,0.913396434936424,0.461230994512117,1.3565037649736,1.41106448562846,1.13099932196708,16.3148678704687,0,0,0.323533699894818,0,0,0,0.292780797011547,0,0,0,0,0,0.299581278809645,0.915001205637253,0.251308704225729,0,0,0.20778804455956,0.324482526135515,0,0,0,0,0.130120442962704,0,0.180062129805349,0.30140963567143,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0.215567992932842,0.567318240503458,0.527853372491847,0,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0.469052119962192,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,1.06644125267617,0.464473343720877,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.407302655690628,0,0,0,0,0,0,0,0.166845105716094,0.393117990226406,0.224862112384854,0,0,0,0,0,0.274561413188081,1.43768206527355,0.372140947668503,0,0,0,0,0,0.37898282354097,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.35613120733451,0.325773918707152,0,0,0.728341908464944,0.604647113929502,0.943025398779491,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0.18006109403131,1.16422815404479,0.214337035031592,0.532020700926821,0.891844088010353,0.822745103010605,0,3.52007562095566,4.66030555900404,0,0.16488625294148,0,0,0,0,0,0.18542530201051,0,0.619160603889667,0,0,0.136694227721025,0,0,0,0,0,0.474503990371703,0,0.216010681643603,0,0.218362563746178,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0.352071715937262,0.5208175393758,0.209718688851422,0.241584120826006,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0,0,0,3.99574716073316,1.52513556236109,7.05115388729129,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.399024873401031,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0.618105171716683,0.320919209591815,0,0.50695859978048,0.188626341386076,0.187283014939765,0.128050304809739,0.402048282689293,0,0.347652977834566,0.38581844092741,0.412085900803307,0,0.342869252385415,0.70990322463735,0.238436189947321,0,0.0941093804153306,0,0,1.05227884575137,0.271608227691724,0.561142271657738,0.237270036248348,0.197008964751127,0,0,0.192906610981141,0,0.467863216890817,0.214871054048298,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0.65407546914134,0.219686182734472,0,0.279972843250725,0,0,0,0,0.514518872071894,0.573066879877513,0,0.606949382578793,0,0.633831403506179,0,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0.383381884072945,0,0,0,0.153606533256243,0,0.365950574409639,0,0.279182999001381,0,0.45839474333043,0.589257170947335,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.890652834388949,1.38788261412909,0.913396434936424,0.461230994512117,1.3565037649736,1.41106448562846,1.13099932196708,16.3148678704687,0,0,0.323533699894818,0,0,0,0.292780797011547,0,0,0,0,0,0.299581278809645,0.915001205637253,0.251308704225729,0,0,0.20778804455956,0.324482526135515,0,0,0,0,0.130120442962704,0,0.180062129805349,0.30140963567143,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0.215567992932842,0.567318240503458,0.527853372491847,0,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0.469052119962192,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,1.06644125267617,0.464473343720877,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.407302655690628,0,0,0,0,0,0,0,0.166845105716094,0.393117990226406,0.224862112384854,0,0,0,0,0,0.274561413188081,1.43768206527355,0.372140947668503,0,0,0,0,0,0.37898282354097,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.35613120733451,0.325773918707152,0,0,0.728341908464944,0.604647113929502,0.943025398779491,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0.18006109403131,1.16422815404479,0.214337035031592,0.532020700926821,0.891844088010353,0.822745103010605,0,3.52007562095566,4.66030555900404,0,0.16488625294148,0,0,0,0,0,0.18542530201051,0,0.619160603889667,0,0,0.136694227721025,0,0,0,0,0,0.474503990371703,0,0.216010681643603,0,0.218362563746178,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0.352071715937262,0.5208175393758,0.209718688851422,0.241584120826006,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0,0,0,3.99574716073316,1.52513556236109,7.05115388729129,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.399024873401031,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0.618105171716683,0.320919209591815,0,0.50695859978048,0.188626341386076,0.187283014939765,0.128050304809739,0.402048282689293,0,0.347652977834566,0.38581844092741,0.412085900803307,0,0.342869252385415,0.70990322463735,0.238436189947321,0,0.0941093804153306,0,0,1.05227884575137,0.271608227691724,0.561142271657738,0.237270036248348,0.197008964751127,0,0,0.192906610981141,0,0.467863216890817,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p@chr6:4705579..4705590,+ | |short_description=p@chr6:4705579..4705590,+ | ||
}} | }} |
Latest revision as of 19:17, 5 August 2015
Short description: | p@chr6:4705579..4705590, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:4705579..4705590, + |
Coexpression cluster: | MCL_coexpression_mm9:144 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.98e-20 | 3 |
trophoblast cell | 2.98e-20 | 3 |
natural helper lymphocyte | 2.74e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.91e-20 | 3 |
extraembryonic structure | 1.91e-20 | 3 |
membranous layer | 1.91e-20 | 3 |
blastocyst | 2.98e-20 | 3 |
blastula | 2.98e-20 | 3 |
cleaving embryo | 2.98e-20 | 3 |
adrenal gland | 1.96e-14 | 7 |
adrenal/interrenal gland | 1.96e-14 | 7 |
placenta | 4.53e-14 | 2 |
chorion | 4.53e-14 | 2 |
allantois | 4.53e-14 | 2 |
amnion | 4.65e-08 | 1 |
embryonic uterus | 1.78e-07 | 4 |
uterus | 1.78e-07 | 4 |
intermediate mesoderm | 2.45e-07 | 14 |