FFCP PHASE1:Mm9::chr11:32100466..32100472,-: Difference between revisions
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{{FFCP|EntrezGene=16199|HGNC=|MCL_coexpression_id=18|UniProt=F8WJ69,A2AVE0,Q01114,Q78PA5,B7ZD65|association_with_transcript=-187bp_to_ENSMUST00000020518,ENSMUST00000131979,NM_001134458,NM_008374,uc007iix.2,uc007iiy.2,uc007iiz.2_5end|description=CAGE_peak_3_at_Il9r_5end|id=chr11:32100466..32100472,-|ontology_enrichment_celltype=CL:0000553!4.73e-13!6;CL:0000556!4.73e-13!6;CL:0000050!1.44e-08!9;CL:0000414!6.18e-07!11|ontology_enrichment_celltype_v019_2=CL:0000553,8.13e-23,6;CL:0000556,8.13e-23,6;CL:0000050,1.69e-15,9;CL:0000945,1.86e-15,1;CL:0000236,1.86e-15,1;CL:0000826,1.86e-15,1;CL:0000839,5.70e-11,13;CL:0002031,6.44e-10,25;CL:0000763,4.76e-09,16;CL:0000988,7.40e-08,32;CL:0002032,7.40e-08,32;CL:0000037,7.40e-08,32;CL:0000837,7.40e-08,32;CL:0000049,9.99e-08,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!3.66e-20!48;UBERON:0002390!6.04e-15!45;UBERON:0003061!6.04e-15!45;UBERON:0002405!5.69e-14!70;UBERON:0004177!1.79e-11!29;UBERON:0002465!5.82e-10!3;UBERON:0003081!6.87e-10!88;UBERON:0002370!4.29e-08!23;UBERON:0000974!4.29e-08!23;UBERON:0004807!4.29e-08!23;UBERON:0005058!4.29e-08!23;UBERON:0003351!4.29e-08!23;UBERON:0009113!4.29e-08!23;UBERON:0003295!4.29e-08!23;UBERON:0009722!4.29e-08!23;UBERON:0005562!4.29e-08!23;UBERON:0007690!4.29e-08!23;UBERON:0006562!1.07e-07!24;UBERON:0003408!1.07e-07!24;UBERON:0001557!1.07e-07!24;UBERON:0001042!1.07e-07!24;UBERON:0008814!1.07e-07!24;UBERON:0009145!1.07e-07!24;UBERON:0001962!2.94e-07!2;UBERON:0001961!2.94e-07!2;UBERON:0001744!2.94e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.76e-09,16;UBERON:0001962,1.81e-08,2;UBERON:0001961,1.81e-08,2;UBERON:0001744,1.81e-08,2;UBERON:0002193,4.79e-08,48;UBERON:0002405,4.79e-08,48;UBERON:0001474,9.24e-07,22;UBERON:0004765,9.24e-07,22;UBERON:0001434,9.24e-07,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.607425802169478,0,3.62781490161973,3.42786084014347,6.79023442876848,0,0,0,1.11994695955385,0.91763712426868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00669563634642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345369963731791,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36696704638282,0,0,0,0.27338845544205,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0.302478555410522,0.0974578807397524,0.384847366561318,0.701261413089414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@Il9r}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:16199 | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F8WJ69,uniprot:A2AVE0,uniprot:Q01114,uniprot:Q78PA5,uniprot:B7ZD65 | |||
|association_with_transcript=-187bp_to_ENSMUST00000020518,ENSMUST00000131979,NM_001134458,NM_008374,uc007iix.2,uc007iiy.2,uc007iiz.2_5end | |||
|cluster_id=chr11:32100466..32100472,- | |||
|description=CAGE_peak_3_at_Il9r_5end | |||
|id=chr11:32100466..32100472,- | |||
|ontology_enrichment_celltype=CL:0000553!4.73e-13!6;CL:0000556!4.73e-13!6;CL:0000050!1.44e-08!9;CL:0000414!6.18e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,8.13e-23,6;CL:0000556,8.13e-23,6;CL:0000050,1.69e-15,9;CL:0000945,1.86e-15,1;CL:0000236,1.86e-15,1;CL:0000826,1.86e-15,1;CL:0000839,5.70e-11,13;CL:0002031,6.44e-10,25;CL:0000763,4.76e-09,16;CL:0000988,7.40e-08,32;CL:0002032,7.40e-08,32;CL:0000037,7.40e-08,32;CL:0000837,7.40e-08,32;CL:0000049,9.99e-08,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.66e-20!48;UBERON:0002390!6.04e-15!45;UBERON:0003061!6.04e-15!45;UBERON:0002405!5.69e-14!70;UBERON:0004177!1.79e-11!29;UBERON:0002465!5.82e-10!3;UBERON:0003081!6.87e-10!88;UBERON:0002370!4.29e-08!23;UBERON:0000974!4.29e-08!23;UBERON:0004807!4.29e-08!23;UBERON:0005058!4.29e-08!23;UBERON:0003351!4.29e-08!23;UBERON:0009113!4.29e-08!23;UBERON:0003295!4.29e-08!23;UBERON:0009722!4.29e-08!23;UBERON:0005562!4.29e-08!23;UBERON:0007690!4.29e-08!23;UBERON:0006562!1.07e-07!24;UBERON:0003408!1.07e-07!24;UBERON:0001557!1.07e-07!24;UBERON:0001042!1.07e-07!24;UBERON:0008814!1.07e-07!24;UBERON:0009145!1.07e-07!24;UBERON:0001962!2.94e-07!2;UBERON:0001961!2.94e-07!2;UBERON:0001744!2.94e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.76e-09,16;UBERON:0001962,1.81e-08,2;UBERON:0001961,1.81e-08,2;UBERON:0001744,1.81e-08,2;UBERON:0002193,4.79e-08,48;UBERON:0002405,4.79e-08,48;UBERON:0001474,9.24e-07,22;UBERON:0004765,9.24e-07,22;UBERON:0001434,9.24e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.607425802169478,0,3.62781490161973,3.42786084014347,6.79023442876848,0,0,0,1.11994695955385,0.91763712426868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00669563634642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345369963731791,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36696704638282,0,0,0,0.27338845544205,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0.302478555410522,0.0974578807397524,0.384847366561318,0.701261413089414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@Il9r | |||
}} |
Revision as of 19:38, 5 August 2015
Short description: | p3@Il9r |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Il9r_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | -187bp_to_ENSMUST00000020518, ENSMUST00000131979, NM_001134458, NM_008374, uc007iix.2, uc007iiy.2, uc007iiz.2_5end |
EntrezGene: | 16199 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 8.13e-23 | 6 |
megakaryocyte | 8.13e-23 | 6 |
megakaryocyte-erythroid progenitor cell | 1.69e-15 | 9 |
lymphocyte of B lineage | 1.86e-15 | 1 |
B cell | 1.86e-15 | 1 |
pro-B cell | 1.86e-15 | 1 |
myeloid lineage restricted progenitor cell | 5.70e-11 | 13 |
hematopoietic lineage restricted progenitor cell | 6.44e-10 | 25 |
myeloid cell | 4.76e-09 | 16 |
hematopoietic cell | 7.40e-08 | 32 |
hematopoietic oligopotent progenitor cell | 7.40e-08 | 32 |
hematopoietic stem cell | 7.40e-08 | 32 |
hematopoietic multipotent progenitor cell | 7.40e-08 | 32 |
common myeloid progenitor | 9.99e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.76e-09 | 16 |
gut-associated lymphoid tissue | 1.81e-08 | 2 |
mucosa-associated lymphoid tissue | 1.81e-08 | 2 |
lymphoid tissue | 1.81e-08 | 2 |
hemolymphoid system | 4.79e-08 | 48 |
immune system | 4.79e-08 | 48 |
bone element | 9.24e-07 | 22 |
skeletal element | 9.24e-07 | 22 |
skeletal system | 9.24e-07 | 22 |