FFCP PHASE1:Mm9::chr1:67163084..67163097,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=120 | |MCL_coexpression_id=120 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:67163084..67163097,- | |||
|description=CAGE_peak_at_chr1:67163084..67163097,- | |description=CAGE_peak_at_chr1:67163084..67163097,- | ||
|id=chr1:67163084..67163097,- | |id=chr1:67163084..67163097,- | ||
|ontology_enrichment_celltype=CL:0000181!3.77e-11!5;CL:0000417!3.77e-11!5;CL:0000668!3.77e-11!5;CL:0000412!3.77e-11!5;CL:0000182!3.77e-11!5;CL:0000057!8.98e-07!1;CL:0000632!8.98e-07!1 | |ontology_enrichment_celltype=CL:0000181!3.77e-11!5;CL:0000417!3.77e-11!5;CL:0000668!3.77e-11!5;CL:0000412!3.77e-11!5;CL:0000182!3.77e-11!5;CL:0000057!8.98e-07!1;CL:0000632!8.98e-07!1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.78e-15,5;CL:0000057,5.27e-09,1;CL:0000632,5.27e-09,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.61e-24!22;UBERON:0007499!1.61e-24!22;UBERON:0006925!1.61e-24!22;UBERON:0009497!1.61e-24!22;UBERON:0000015!1.61e-24!22;UBERON:0002423!1.61e-24!22;UBERON:0006235!1.61e-24!22;UBERON:0008835!1.61e-24!22;UBERON:0003894!1.61e-24!22;UBERON:0004161!1.61e-24!22;UBERON:0008836!1.61e-24!22;UBERON:0009854!2.11e-23!23;UBERON:0009856!2.11e-23!23;UBERON:0002365!1.95e-21!25;UBERON:0002330!1.95e-21!25;UBERON:0005256!4.42e-13!47;UBERON:0005172!1.73e-12!49;UBERON:0005173!1.73e-12!49;UBERON:0002417!1.73e-12!49;UBERON:0000916!1.73e-12!49;UBERON:0003914!8.21e-11!47;UBERON:0002368!6.30e-10!60;UBERON:0005057!7.35e-10!51;UBERON:0000949!1.25e-09!72;UBERON:0002530!4.78e-09!65;UBERON:0003929!4.79e-09!55;UBERON:0009569!6.91e-09!66;UBERON:0005177!6.73e-08!85;UBERON:0000490!2.59e-07!66;UBERON:0000466!3.53e-07!79;UBERON:0005911!6.19e-07!69;UBERON:0002405!8.13e-07!70 | |ontology_enrichment_uberon=UBERON:0002107!1.61e-24!22;UBERON:0007499!1.61e-24!22;UBERON:0006925!1.61e-24!22;UBERON:0009497!1.61e-24!22;UBERON:0000015!1.61e-24!22;UBERON:0002423!1.61e-24!22;UBERON:0006235!1.61e-24!22;UBERON:0008835!1.61e-24!22;UBERON:0003894!1.61e-24!22;UBERON:0004161!1.61e-24!22;UBERON:0008836!1.61e-24!22;UBERON:0009854!2.11e-23!23;UBERON:0009856!2.11e-23!23;UBERON:0002365!1.95e-21!25;UBERON:0002330!1.95e-21!25;UBERON:0005256!4.42e-13!47;UBERON:0005172!1.73e-12!49;UBERON:0005173!1.73e-12!49;UBERON:0002417!1.73e-12!49;UBERON:0000916!1.73e-12!49;UBERON:0003914!8.21e-11!47;UBERON:0002368!6.30e-10!60;UBERON:0005057!7.35e-10!51;UBERON:0000949!1.25e-09!72;UBERON:0002530!4.78e-09!65;UBERON:0003929!4.79e-09!55;UBERON:0009569!6.91e-09!66;UBERON:0005177!6.73e-08!85;UBERON:0000490!2.59e-07!66;UBERON:0000466!3.53e-07!79;UBERON:0005911!6.19e-07!69;UBERON:0002405!8.13e-07!70 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.17e-29,22;UBERON:0007499,7.17e-29,22;UBERON:0006925,7.17e-29,22;UBERON:0009497,7.17e-29,22;UBERON:0000015,7.17e-29,22;UBERON:0002423,7.17e-29,22;UBERON:0006235,7.17e-29,22;UBERON:0008835,7.17e-29,22;UBERON:0003894,7.17e-29,22;UBERON:0004161,7.17e-29,22;UBERON:0008836,7.17e-29,22;UBERON:0009854,1.35e-27,23;UBERON:0009856,1.35e-27,23;UBERON:0002365,2.36e-25,25;UBERON:0002330,2.36e-25,25;UBERON:0005256,7.53e-14,45;UBERON:0003914,3.10e-13,47;UBERON:0005172,1.14e-12,49;UBERON:0005173,1.14e-12,49;UBERON:0002417,1.14e-12,49;UBERON:0000916,1.14e-12,49;UBERON:0003929,3.22e-11,55;UBERON:0002368,3.15e-10,60;UBERON:0003104,4.76e-10,61;UBERON:0009142,4.76e-10,61;UBERON:0002530,2.18e-09,65;UBERON:0000490,3.10e-09,66;UBERON:0009569,3.10e-09,66;UBERON:0005911,8.39e-09,69;UBERON:0000949,2.09e-08,72;UBERON:0005177,1.35e-07,79;UBERON:0001041,1.72e-07,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.0229671388697,0,24.8263468153396,18.1937396885347,17.0250217096988,6.03911006566533,0,0,0,0,0,0,0,0,0,0,13.35951392713,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.85388415213294,0,0,0,0,0,0,0,8.91743747262695,0,0,0,0.936113019343682,9.09283960609602,6.45830688678884,103.242913571761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.0229671388697,0,24.8263468153396,18.1937396885347,17.0250217096988,6.03911006566533,0,0,0,0,0,0,0,0,0,0,13.35951392713,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.85388415213294,0,0,0,0,0,0,0,8.91743747262695,0,0,0,0.936113019343682,9.09283960609602,6.45830688678884,103.242913571761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | ||
|short_description=p@chr1:67163084..67163097,- | |short_description=p@chr1:67163084..67163097,- | ||
}} | }} |
Latest revision as of 21:58, 5 August 2015
Short description: | p@chr1:67163084..67163097, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:67163084..67163097, - |
Coexpression cluster: | MCL_coexpression_mm9:120 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.78e-15 | 5 |
fibroblast | 5.27e-09 | 1 |
hepatic stellate cell | 5.27e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
liver | 7.17e-29 | 22 |
epithelial sac | 7.17e-29 | 22 |
digestive gland | 7.17e-29 | 22 |
epithelium of foregut-midgut junction | 7.17e-29 | 22 |
anatomical boundary | 7.17e-29 | 22 |
hepatobiliary system | 7.17e-29 | 22 |
foregut-midgut junction | 7.17e-29 | 22 |
hepatic diverticulum | 7.17e-29 | 22 |
liver primordium | 7.17e-29 | 22 |
septum transversum | 7.17e-29 | 22 |
liver bud | 7.17e-29 | 22 |
digestive tract diverticulum | 1.35e-27 | 23 |
sac | 1.35e-27 | 23 |
exocrine gland | 2.36e-25 | 25 |
exocrine system | 2.36e-25 | 25 |
trunk mesenchyme | 7.53e-14 | 45 |
epithelial tube | 3.10e-13 | 47 |
abdomen element | 1.14e-12 | 49 |
abdominal segment element | 1.14e-12 | 49 |
abdominal segment of trunk | 1.14e-12 | 49 |
abdomen | 1.14e-12 | 49 |
gut epithelium | 3.22e-11 | 55 |
endocrine gland | 3.15e-10 | 60 |
mesenchyme | 4.76e-10 | 61 |
entire embryonic mesenchyme | 4.76e-10 | 61 |
gland | 2.18e-09 | 65 |
unilaminar epithelium | 3.10e-09 | 66 |
subdivision of trunk | 3.10e-09 | 66 |
endo-epithelium | 8.39e-09 | 69 |
endocrine system | 2.09e-08 | 72 |
trunk region element | 1.35e-07 | 79 |
foregut | 1.72e-07 | 80 |