FFCP PHASE1:Mm9::chr6:63206101..63206120,+: Difference between revisions
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{{FFCP|EntrezGene=14804|HGNC=|MCL_coexpression_id=401|UniProt=|association_with_transcript=-68bp_to_ENSMUST00000160408_5end|description=CAGE_peak_3_at_Grid2_5end|id=chr6:63206101..63206120,+|ontology_enrichment_celltype=CL:0000540!5.21e-16!33;CL:0000047!5.21e-16!33;CL:0000031!5.21e-16!33;CL:0000404!5.21e-16!33;CL:0000221!1.18e-15!44;CL:0000133!1.18e-15!44;CL:0002319!2.06e-15!43;CL:0000117!1.07e-13!23;CL:0000337!1.07e-13!23;CL:0000393!5.80e-12!39;CL:0000211!5.80e-12!39;CL:0000055!1.30e-11!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.38e-29,23;CL:0000337,2.38e-29,23;CL:0000540,3.06e-19,33;CL:0000047,3.06e-19,33;CL:0000031,3.06e-19,33;CL:0000404,3.06e-19,33;CL:0000393,1.14e-15,39;CL:0000211,1.14e-15,39;CL:0002319,7.65e-14,43;CL:0000221,1.94e-13,44;CL:0000133,1.94e-13,44;CL:0002612,2.46e-09,3;CL:0000120,1.50e-08,3;CL:0002614,2.00e-08,3;CL:0002613,5.29e-08,3;CL:0002610,1.03e-07,3;CL:0002321,4.97e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.84e-33!75;UBERON:0001016!1.84e-33!75;UBERON:0001017!5.56e-33!73;UBERON:0005743!5.56e-33!73;UBERON:0004121!1.95e-28!102;UBERON:0000924!1.95e-28!102;UBERON:0006601!1.95e-28!102;UBERON:0002346!1.12e-23!71;UBERON:0003075!1.12e-23!71;UBERON:0007284!1.12e-23!71;UBERON:0001049!7.09e-23!52;UBERON:0005068!7.09e-23!52;UBERON:0006241!7.09e-23!52;UBERON:0007135!7.09e-23!52;UBERON:0000033!4.05e-22!63;UBERON:0000955!3.81e-20!50;UBERON:0006238!3.81e-20!50;UBERON:0002616!1.09e-19!49;UBERON:0002020!1.07e-17!34;UBERON:0003056!1.70e-17!49;UBERON:0003080!4.12e-15!40;UBERON:0002780!2.44e-14!39;UBERON:0001890!2.44e-14!39;UBERON:0006240!2.44e-14!39;UBERON:0002791!4.97e-13!29;UBERON:0003528!4.97e-13!29;UBERON:0001893!4.97e-13!29;UBERON:0007811!1.05e-11!86;UBERON:0000153!1.38e-10!94;UBERON:0003076!1.06e-08!12;UBERON:0003057!1.06e-08!12;UBERON:0002420!2.87e-08!8;UBERON:0007245!2.87e-08!8;UBERON:0010009!2.87e-08!8;UBERON:0010011!2.87e-08!8;UBERON:0000454!2.87e-08!8;UBERON:0002240!2.51e-07!6;UBERON:0005174!2.51e-07!6;UBERON:0001137!2.51e-07!6;UBERON:0002619!2.65e-07!17;UBERON:0000956!5.32e-07!21;UBERON:0001869!5.32e-07!21;UBERON:0000203!5.32e-07!21;UBERON:0002021!6.48e-07!10;UBERON:0000411!6.48e-07!10;UBERON:0001950!6.48e-07!10;UBERON:0002298!7.71e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.26e-37,54;UBERON:0001017,9.10e-35,73;UBERON:0001016,1.15e-33,75;UBERON:0001049,1.85e-33,52;UBERON:0005068,1.85e-33,52;UBERON:0006241,1.85e-33,52;UBERON:0007135,1.85e-33,52;UBERON:0002346,4.85e-26,64;UBERON:0003075,4.85e-26,64;UBERON:0007284,4.85e-26,64;UBERON:0002020,7.80e-26,34;UBERON:0004121,3.52e-25,95;UBERON:0000924,3.52e-25,95;UBERON:0006601,3.52e-25,95;UBERON:0010371,4.50e-22,73;UBERON:0002616,7.92e-22,46;UBERON:0003076,8.51e-22,12;UBERON:0003057,8.51e-22,12;UBERON:0000955,2.96e-21,47;UBERON:0006238,2.96e-21,47;UBERON:0002420,6.43e-19,8;UBERON:0007245,6.43e-19,8;UBERON:0010009,6.43e-19,8;UBERON:0010011,6.43e-19,8;UBERON:0000454,6.43e-19,8;UBERON:0002240,1.74e-16,6;UBERON:0005174,1.74e-16,6;UBERON:0001137,1.74e-16,6;UBERON:0010314,3.04e-16,92;UBERON:0003080,5.32e-16,40;UBERON:0003528,6.43e-16,29;UBERON:0002791,6.43e-16,29;UBERON:0001893,6.43e-16,29;UBERON:0002780,1.53e-14,39;UBERON:0001890,1.53e-14,39;UBERON:0006240,1.53e-14,39;UBERON:0001948,2.41e-14,5;UBERON:0002315,2.41e-14,5;UBERON:0003056,2.55e-12,49;UBERON:0000369,4.30e-12,5;UBERON:0002435,4.30e-12,5;UBERON:0000204,4.30e-12,5;UBERON:0010082,4.30e-12,5;UBERON:0000025,6.43e-12,114;UBERON:0004111,9.87e-11,122;UBERON:0002950,1.58e-10,4;UBERON:0001891,1.58e-10,4;UBERON:0009616,1.58e-10,4;UBERON:0010286,1.58e-10,4;UBERON:0002257,2.46e-09,3;UBERON:0011216,7.86e-09,194;UBERON:0002038,2.00e-08,3;UBERON:0009663,2.00e-08,3;UBERON:0009661,2.00e-08,3;UBERON:0000125,2.00e-08,3;UBERON:0002308,2.00e-08,3;UBERON:0002021,2.09e-08,10;UBERON:0000411,2.09e-08,10;UBERON:0001950,2.09e-08,10;UBERON:0004733,9.93e-08,6;UBERON:0004732,9.93e-08,6;UBERON:0002028,9.93e-08,6;UBERON:0007277,9.93e-08,6;UBERON:0004684,1.03e-07,3;UBERON:0002275,1.03e-07,3|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,3.23706337375356,1.5869729378161,5.07065122804943,0,0,0,0,0,0.599200221036809,0.768436610643109,0,0,0.210324961351382,3.71346279724945,4.63823935998388,0.122490799214954,0.0958454710182364,0,1.10115880999389,2.55374676170375,1.68967186581868,2.2420668914133,1.28082701043374,2.6045668527838,2.79182999001381,2.8138130501584,2.13917546887534,6.77645746589436,4.27115042397309,5.40558392893372,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,10.8328894894272,11.1006754611131,0,0,0,0,2.09706895166752,2.28750301409313,1.13088916901578,1.04294592115366,1.02286182932132,1.87009240103604,2.27137768294861,0.101839363850316,0,0,0.420883711772948,0.130120442962704,0.689706313300419,0.180062129805349,0.30140963567143,0.272145996605311,0.2562274405697,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.823236899034275,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0.234690248288502,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,3.53211297973142,2.57865710502847,0,0,0.631016438832513,0.390438744296638,0.430846795465598,0.477937595905104,0.222798674082394,0.849229592366497,0,0.584511715822624,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0.680879211507576,0,0,0.214337035031592,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0.161464426695906,0,0,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,3.68260189205742,1.71868654031819,1.89038500578056,1.37016503954128,0,0.675022500231806,0.45032120322422,1.35942722695261,0.51776031175182,0,0.399024873401031,0.853668028770671,0.243106717068294,0,0,0,0.618105171716683,0.962757628775446,0.758091635291392,0.25347929989024,0.565879024158229,0.187283014939765,0.448176066834085,0.287177344778066,0.476293691283074,0.463537303779422,0,0,0.735994600671987,0.342869252385415,0.532427418478012,1.1921809497366,0.872078499793971,0,0.25384382367503,0.548783918618318,0.526139422875686,0.543216455383447,0,0.355905054372522,0.394017929502254,0.818462086339379,0.154936841185966,0.385813221962283,0.749431733813838,0,0.644613162144895,0.191288332068843,0.441182838239031,0.231867835620421|short_description=p3@Grid2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14804 | |||
|HGNC= | |||
|MCL_coexpression_id=401 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-68bp_to_ENSMUST00000160408_5end | |||
|cluster_id=chr6:63206101..63206120,+ | |||
|description=CAGE_peak_3_at_Grid2_5end | |||
|id=chr6:63206101..63206120,+ | |||
|ontology_enrichment_celltype=CL:0000540!5.21e-16!33;CL:0000047!5.21e-16!33;CL:0000031!5.21e-16!33;CL:0000404!5.21e-16!33;CL:0000221!1.18e-15!44;CL:0000133!1.18e-15!44;CL:0002319!2.06e-15!43;CL:0000117!1.07e-13!23;CL:0000337!1.07e-13!23;CL:0000393!5.80e-12!39;CL:0000211!5.80e-12!39;CL:0000055!1.30e-11!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.38e-29,23;CL:0000337,2.38e-29,23;CL:0000540,3.06e-19,33;CL:0000047,3.06e-19,33;CL:0000031,3.06e-19,33;CL:0000404,3.06e-19,33;CL:0000393,1.14e-15,39;CL:0000211,1.14e-15,39;CL:0002319,7.65e-14,43;CL:0000221,1.94e-13,44;CL:0000133,1.94e-13,44;CL:0002612,2.46e-09,3;CL:0000120,1.50e-08,3;CL:0002614,2.00e-08,3;CL:0002613,5.29e-08,3;CL:0002610,1.03e-07,3;CL:0002321,4.97e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.84e-33!75;UBERON:0001016!1.84e-33!75;UBERON:0001017!5.56e-33!73;UBERON:0005743!5.56e-33!73;UBERON:0004121!1.95e-28!102;UBERON:0000924!1.95e-28!102;UBERON:0006601!1.95e-28!102;UBERON:0002346!1.12e-23!71;UBERON:0003075!1.12e-23!71;UBERON:0007284!1.12e-23!71;UBERON:0001049!7.09e-23!52;UBERON:0005068!7.09e-23!52;UBERON:0006241!7.09e-23!52;UBERON:0007135!7.09e-23!52;UBERON:0000033!4.05e-22!63;UBERON:0000955!3.81e-20!50;UBERON:0006238!3.81e-20!50;UBERON:0002616!1.09e-19!49;UBERON:0002020!1.07e-17!34;UBERON:0003056!1.70e-17!49;UBERON:0003080!4.12e-15!40;UBERON:0002780!2.44e-14!39;UBERON:0001890!2.44e-14!39;UBERON:0006240!2.44e-14!39;UBERON:0002791!4.97e-13!29;UBERON:0003528!4.97e-13!29;UBERON:0001893!4.97e-13!29;UBERON:0007811!1.05e-11!86;UBERON:0000153!1.38e-10!94;UBERON:0003076!1.06e-08!12;UBERON:0003057!1.06e-08!12;UBERON:0002420!2.87e-08!8;UBERON:0007245!2.87e-08!8;UBERON:0010009!2.87e-08!8;UBERON:0010011!2.87e-08!8;UBERON:0000454!2.87e-08!8;UBERON:0002240!2.51e-07!6;UBERON:0005174!2.51e-07!6;UBERON:0001137!2.51e-07!6;UBERON:0002619!2.65e-07!17;UBERON:0000956!5.32e-07!21;UBERON:0001869!5.32e-07!21;UBERON:0000203!5.32e-07!21;UBERON:0002021!6.48e-07!10;UBERON:0000411!6.48e-07!10;UBERON:0001950!6.48e-07!10;UBERON:0002298!7.71e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.26e-37,54;UBERON:0001017,9.10e-35,73;UBERON:0001016,1.15e-33,75;UBERON:0001049,1.85e-33,52;UBERON:0005068,1.85e-33,52;UBERON:0006241,1.85e-33,52;UBERON:0007135,1.85e-33,52;UBERON:0002346,4.85e-26,64;UBERON:0003075,4.85e-26,64;UBERON:0007284,4.85e-26,64;UBERON:0002020,7.80e-26,34;UBERON:0004121,3.52e-25,95;UBERON:0000924,3.52e-25,95;UBERON:0006601,3.52e-25,95;UBERON:0010371,4.50e-22,73;UBERON:0002616,7.92e-22,46;UBERON:0003076,8.51e-22,12;UBERON:0003057,8.51e-22,12;UBERON:0000955,2.96e-21,47;UBERON:0006238,2.96e-21,47;UBERON:0002420,6.43e-19,8;UBERON:0007245,6.43e-19,8;UBERON:0010009,6.43e-19,8;UBERON:0010011,6.43e-19,8;UBERON:0000454,6.43e-19,8;UBERON:0002240,1.74e-16,6;UBERON:0005174,1.74e-16,6;UBERON:0001137,1.74e-16,6;UBERON:0010314,3.04e-16,92;UBERON:0003080,5.32e-16,40;UBERON:0003528,6.43e-16,29;UBERON:0002791,6.43e-16,29;UBERON:0001893,6.43e-16,29;UBERON:0002780,1.53e-14,39;UBERON:0001890,1.53e-14,39;UBERON:0006240,1.53e-14,39;UBERON:0001948,2.41e-14,5;UBERON:0002315,2.41e-14,5;UBERON:0003056,2.55e-12,49;UBERON:0000369,4.30e-12,5;UBERON:0002435,4.30e-12,5;UBERON:0000204,4.30e-12,5;UBERON:0010082,4.30e-12,5;UBERON:0000025,6.43e-12,114;UBERON:0004111,9.87e-11,122;UBERON:0002950,1.58e-10,4;UBERON:0001891,1.58e-10,4;UBERON:0009616,1.58e-10,4;UBERON:0010286,1.58e-10,4;UBERON:0002257,2.46e-09,3;UBERON:0011216,7.86e-09,194;UBERON:0002038,2.00e-08,3;UBERON:0009663,2.00e-08,3;UBERON:0009661,2.00e-08,3;UBERON:0000125,2.00e-08,3;UBERON:0002308,2.00e-08,3;UBERON:0002021,2.09e-08,10;UBERON:0000411,2.09e-08,10;UBERON:0001950,2.09e-08,10;UBERON:0004733,9.93e-08,6;UBERON:0004732,9.93e-08,6;UBERON:0002028,9.93e-08,6;UBERON:0007277,9.93e-08,6;UBERON:0004684,1.03e-07,3;UBERON:0002275,1.03e-07,3 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,3.23706337375356,1.5869729378161,5.07065122804943,0,0,0,0,0,0.599200221036809,0.768436610643109,0,0,0.210324961351382,3.71346279724945,4.63823935998388,0.122490799214954,0.0958454710182364,0,1.10115880999389,2.55374676170375,1.68967186581868,2.2420668914133,1.28082701043374,2.6045668527838,2.79182999001381,2.8138130501584,2.13917546887534,6.77645746589436,4.27115042397309,5.40558392893372,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,10.8328894894272,11.1006754611131,0,0,0,0,2.09706895166752,2.28750301409313,1.13088916901578,1.04294592115366,1.02286182932132,1.87009240103604,2.27137768294861,0.101839363850316,0,0,0.420883711772948,0.130120442962704,0.689706313300419,0.180062129805349,0.30140963567143,0.272145996605311,0.2562274405697,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.823236899034275,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0.234690248288502,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,3.53211297973142,2.57865710502847,0,0,0.631016438832513,0.390438744296638,0.430846795465598,0.477937595905104,0.222798674082394,0.849229592366497,0,0.584511715822624,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0.680879211507576,0,0,0.214337035031592,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0.161464426695906,0,0,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,3.68260189205742,1.71868654031819,1.89038500578056,1.37016503954128,0,0.675022500231806,0.45032120322422,1.35942722695261,0.51776031175182,0,0.399024873401031,0.853668028770671,0.243106717068294,0,0,0,0.618105171716683,0.962757628775446,0.758091635291392,0.25347929989024,0.565879024158229,0.187283014939765,0.448176066834085,0.287177344778066,0.476293691283074,0.463537303779422,0,0,0.735994600671987,0.342869252385415,0.532427418478012,1.1921809497366,0.872078499793971,0,0.25384382367503,0.548783918618318,0.526139422875686,0.543216455383447,0,0.355905054372522,0.394017929502254,0.818462086339379,0.154936841185966,0.385813221962283,0.749431733813838,0,0.644613162144895,0.191288332068843,0.441182838239031,0.231867835620421 | |||
|short_description=p3@Grid2 | |||
}} |
Revision as of 00:37, 6 August 2015
Short description: | p3@Grid2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Grid2_5end |
Coexpression cluster: | MCL_coexpression_mm9:401 |
Association with transcript: | -68bp_to_ENSMUST00000160408_5end |
EntrezGene: | 14804 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.38e-29 | 23 |
neuroblast (sensu Vertebrata) | 2.38e-29 | 23 |
neuron | 3.06e-19 | 33 |
neuronal stem cell | 3.06e-19 | 33 |
neuroblast | 3.06e-19 | 33 |
electrically signaling cell | 3.06e-19 | 33 |
electrically responsive cell | 1.14e-15 | 39 |
electrically active cell | 1.14e-15 | 39 |
neural cell | 7.65e-14 | 43 |
ectodermal cell | 1.94e-13 | 44 |
neurectodermal cell | 1.94e-13 | 44 |
neuron of the ventral spinal cord | 2.46e-09 | 3 |
granule cell | 1.50e-08 | 3 |
neuron of the substantia nigra | 2.00e-08 | 3 |
striatum neuron | 5.29e-08 | 3 |
raphe nuclei neuron | 1.03e-07 | 3 |
embryonic cell | 4.97e-07 | 70 |