FFCP PHASE1:Mm9::chr6:91183204..91183213,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=326 | |MCL_coexpression_id=326 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:91183204..91183213,+ | |||
|description=CAGE_peak_at_chr6:91183204..91183213,+ | |description=CAGE_peak_at_chr6:91183204..91183213,+ | ||
|id=chr6:91183204..91183213,+ | |id=chr6:91183204..91183213,+ | ||
|ontology_enrichment_celltype=CL:0000222!9.71e-19!7;CL:0000680!2.47e-16!6;CL:0000183!2.47e-16!6;CL:0000187!2.47e-16!6;CL:0000056!2.47e-16!6;CL:0000355!1.28e-10!9;CL:0002494!2.33e-09!3;CL:0000737!2.33e-09!3;CL:0000746!2.33e-09!3;CL:0000513!2.33e-09!3;CL:0000192!1.31e-08!3;CL:0000359!1.31e-08!3;CL:0002539!1.31e-08!3;CL:0000514!1.31e-08!3 | |ontology_enrichment_celltype=CL:0000222!9.71e-19!7;CL:0000680!2.47e-16!6;CL:0000183!2.47e-16!6;CL:0000187!2.47e-16!6;CL:0000056!2.47e-16!6;CL:0000355!1.28e-10!9;CL:0002494!2.33e-09!3;CL:0000737!2.33e-09!3;CL:0000746!2.33e-09!3;CL:0000513!2.33e-09!3;CL:0000192!1.31e-08!3;CL:0000359!1.31e-08!3;CL:0002539!1.31e-08!3;CL:0000514!1.31e-08!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002494,1.33e-65,3;CL:0000737,1.33e-65,3;CL:0000746,1.33e-65,3;CL:0000513,1.33e-65,3;CL:0000680,2.03e-33,6;CL:0000187,2.03e-33,6;CL:0000056,2.03e-33,6;CL:0000222,8.27e-29,7;CL:0000355,1.19e-22,9;CL:0000708,5.17e-12,2;CL:0000151,1.88e-08,3;CL:0000499,1.88e-08,3;CL:0000327,1.88e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!1.28e-10!9;UBERON:0002036!1.28e-10!9;UBERON:0002385!1.28e-10!9;UBERON:0000486!1.28e-10!9;UBERON:0001015!1.28e-10!9;UBERON:0004290!1.28e-10!9;UBERON:0003082!1.28e-10!9;UBERON:0000383!1.78e-09!10;UBERON:0000055!8.54e-09!5;UBERON:0001981!8.54e-09!5;UBERON:0002049!8.54e-09!5;UBERON:0007500!8.54e-09!5;UBERON:0007798!8.54e-09!5;UBERON:0004537!8.54e-09!5;UBERON:0006965!8.54e-09!5;UBERON:0001135!1.31e-08!3;UBERON:0004237!1.31e-08!3;UBERON:0004695!1.31e-08!3;UBERON:0002111!1.31e-08!3;UBERON:0004178!1.31e-08!3;UBERON:0002329!1.54e-08!11;UBERON:0003077!1.54e-08!11;UBERON:0003059!1.54e-08!11;UBERON:0007282!1.54e-08!11;UBERON:0009618!1.54e-08!11;UBERON:0007285!1.54e-08!11 | |ontology_enrichment_uberon=UBERON:0001134!1.28e-10!9;UBERON:0002036!1.28e-10!9;UBERON:0002385!1.28e-10!9;UBERON:0000486!1.28e-10!9;UBERON:0001015!1.28e-10!9;UBERON:0004290!1.28e-10!9;UBERON:0003082!1.28e-10!9;UBERON:0000383!1.78e-09!10;UBERON:0000055!8.54e-09!5;UBERON:0001981!8.54e-09!5;UBERON:0002049!8.54e-09!5;UBERON:0007500!8.54e-09!5;UBERON:0007798!8.54e-09!5;UBERON:0004537!8.54e-09!5;UBERON:0006965!8.54e-09!5;UBERON:0001135!1.31e-08!3;UBERON:0004237!1.31e-08!3;UBERON:0004695!1.31e-08!3;UBERON:0002111!1.31e-08!3;UBERON:0004178!1.31e-08!3;UBERON:0002329!1.54e-08!11;UBERON:0003077!1.54e-08!11;UBERON:0003059!1.54e-08!11;UBERON:0007282!1.54e-08!11;UBERON:0009618!1.54e-08!11;UBERON:0007285!1.54e-08!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.19e-22,9;UBERON:0002036,1.19e-22,9;UBERON:0002385,1.19e-22,9;UBERON:0000486,1.19e-22,9;UBERON:0007503,1.19e-22,9;UBERON:0001015,1.19e-22,9;UBERON:0002329,1.19e-22,9;UBERON:0003082,1.19e-22,9;UBERON:0003059,1.19e-22,9;UBERON:0007282,1.19e-22,9;UBERON:0004290,1.19e-22,9;UBERON:0009618,1.19e-22,9;UBERON:0000383,1.71e-20,10;UBERON:0007524,1.00e-18,11;UBERON:0003077,1.00e-18,11;UBERON:0007285,1.00e-18,11;UBERON:0003210,5.17e-12,2;UBERON:0007100,8.03e-12,18;UBERON:0000948,8.03e-12,18;UBERON:0005498,8.03e-12,18;UBERON:0004140,8.03e-12,18;UBERON:0009881,8.03e-12,18;UBERON:0004141,8.03e-12,18;UBERON:0003084,8.03e-12,18;UBERON:0007005,8.03e-12,18;UBERON:0004139,8.03e-12,18;UBERON:0004291,8.03e-12,18;UBERON:0004535,1.91e-09,23;UBERON:0001009,1.91e-09,23;UBERON:0002204,5.08e-07,32;UBERON:0004872,7.84e-07,33 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.506884656097573,0.183546752161682,0,0,0,0,0.279972843250725,0,0,0,0,4.11615097657515,2.29226751951005,1.03134418455488,0,0,0,1.0165335962074,0.889294796111139,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0.151143120213571,0.289864488701678,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.240390899039938,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.506884656097573,0.183546752161682,0,0,0,0,0.279972843250725,0,0,0,0,4.11615097657515,2.29226751951005,1.03134418455488,0,0,0,1.0165335962074,0.889294796111139,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0.151143120213571,0.289864488701678,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.240390899039938,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:91183204..91183213,+ | |short_description=p@chr6:91183204..91183213,+ | ||
}} | }} |
Latest revision as of 07:45, 6 August 2015
Short description: | p@chr6:91183204..91183213, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:91183204..91183213, + |
Coexpression cluster: | MCL_coexpression_mm9:326 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 1.33e-65 | 3 |
striated muscle cell | 1.33e-65 | 3 |
cardiac muscle cell | 1.33e-65 | 3 |
cardiac muscle myoblast | 1.33e-65 | 3 |
muscle precursor cell | 2.03e-33 | 6 |
muscle cell | 2.03e-33 | 6 |
myoblast | 2.03e-33 | 6 |
mesodermal cell | 8.27e-29 | 7 |
multi-potent skeletal muscle stem cell | 1.19e-22 | 9 |
leptomeningeal cell | 5.17e-12 | 2 |
secretory cell | 1.88e-08 | 3 |
stromal cell | 1.88e-08 | 3 |
extracellular matrix secreting cell | 1.88e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.19e-22 | 9 |
striated muscle tissue | 1.19e-22 | 9 |
muscle tissue | 1.19e-22 | 9 |
multilaminar epithelium | 1.19e-22 | 9 |
epithelial vesicle | 1.19e-22 | 9 |
musculature | 1.19e-22 | 9 |
somite | 1.19e-22 | 9 |
myotome | 1.19e-22 | 9 |
presomitic mesoderm | 1.19e-22 | 9 |
presumptive segmental plate | 1.19e-22 | 9 |
dermomyotome | 1.19e-22 | 9 |
trunk paraxial mesoderm | 1.19e-22 | 9 |
musculature of body | 1.71e-20 | 10 |
dense mesenchyme tissue | 1.00e-18 | 11 |
paraxial mesoderm | 1.00e-18 | 11 |
presumptive paraxial mesoderm | 1.00e-18 | 11 |
blood-cerebrospinal fluid barrier | 5.17e-12 | 2 |
primary circulatory organ | 8.03e-12 | 18 |
heart | 8.03e-12 | 18 |
primitive heart tube | 8.03e-12 | 18 |
primary heart field | 8.03e-12 | 18 |
anterior lateral plate mesoderm | 8.03e-12 | 18 |
heart tube | 8.03e-12 | 18 |
heart primordium | 8.03e-12 | 18 |
cardiac mesoderm | 8.03e-12 | 18 |
cardiogenic plate | 8.03e-12 | 18 |
heart rudiment | 8.03e-12 | 18 |
cardiovascular system | 1.91e-09 | 23 |
circulatory system | 1.91e-09 | 23 |
musculoskeletal system | 5.08e-07 | 32 |
splanchnic layer of lateral plate mesoderm | 7.84e-07 | 33 |