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FFCP PHASE1:Mm9::chr3:28162489..28162499,+: Difference between revisions

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{{FFCP|EntrezGene=665113|HGNC=|MCL_coexpression_id=1|UniProt=B9EKN8,B2RQ80|association_with_transcript=4bp_to_ENSMUST00000159680,ENSMUST00000160307,ENSMUST00000162037_5end|description=CAGE_peak_5_at_Tnik_5end|id=chr3:28162489..28162499,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!7.76e-09!102;UBERON:0000924!7.76e-09!102;UBERON:0006601!7.76e-09!102;UBERON:0002346!9.24e-09!71;UBERON:0003075!9.24e-09!71;UBERON:0007284!9.24e-09!71;UBERON:0000033!1.05e-08!63;UBERON:0001049!1.65e-08!52;UBERON:0005068!1.65e-08!52;UBERON:0006241!1.65e-08!52;UBERON:0007135!1.65e-08!52;UBERON:0000073!3.12e-08!75;UBERON:0001016!3.12e-08!75;UBERON:0002020!1.50e-07!34;UBERON:0001017!1.70e-07!73;UBERON:0005743!1.70e-07!73;UBERON:0000955!3.72e-07!50;UBERON:0006238!3.72e-07!50;UBERON:0003056!5.07e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002021,9.18e-22,10;UBERON:0000411,9.18e-22,10;UBERON:0001950,9.18e-22,10;UBERON:0002619,4.07e-19,17;UBERON:0000955,7.24e-19,47;UBERON:0006238,7.24e-19,47;UBERON:0000956,1.30e-18,21;UBERON:0001869,1.30e-18,21;UBERON:0000203,1.30e-18,21;UBERON:0002616,5.28e-17,46;UBERON:0001049,1.10e-16,52;UBERON:0005068,1.10e-16,52;UBERON:0006241,1.10e-16,52;UBERON:0007135,1.10e-16,52;UBERON:0001017,9.22e-16,73;UBERON:0001016,3.07e-15,75;UBERON:0002346,1.35e-14,64;UBERON:0003075,1.35e-14,64;UBERON:0007284,1.35e-14,64;UBERON:0000073,5.17e-14,54;UBERON:0003528,6.40e-13,29;UBERON:0002791,6.40e-13,29;UBERON:0001893,6.40e-13,29;UBERON:0004121,1.51e-12,95;UBERON:0000924,1.51e-12,95;UBERON:0006601,1.51e-12,95;UBERON:0010371,2.32e-12,73;UBERON:0002780,5.50e-11,39;UBERON:0001890,5.50e-11,39;UBERON:0006240,5.50e-11,39;UBERON:0002020,1.01e-10,34;UBERON:0003080,1.18e-10,40;UBERON:0004733,4.57e-10,6;UBERON:0004732,4.57e-10,6;UBERON:0002028,4.57e-10,6;UBERON:0007277,4.57e-10,6;UBERON:0003056,9.45e-10,49;UBERON:0010314,4.48e-09,92;UBERON:0001896,4.70e-08,2;UBERON:0002298,4.70e-08,2;UBERON:0005290,4.70e-08,2;UBERON:0010096,4.70e-08,2;UBERON:0003076,2.49e-07,12;UBERON:0003057,2.49e-07,12|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0.129123323441576,0.140788722151667,0,0,0.0797721589953364,0,0.0874204024189974,0,0,0,0,0.137114433605739,0,1.02051948181284,0,0,0,0.22940928106717,0,0,0,0,0,0,0.635030673459631,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0.515672092277442,0.606949382578793,0,0,0,0,0,0,0,0,0,0.518448061542388,0.270011876663381,0.420649922702764,0.571301968807607,0.662605622854841,0.367472397644862,0.0958454710182364,0,0,0.638436690425939,0.307213066512487,0.131886287730194,0.274462930807229,0,0.279182999001381,0,0.763991238884051,0.589257170947335,0.284743361598206,0.559198337475902,0.757261933331841,0.755715601067855,0.579728977403356,0,0,0,0,0,0.280888840263504,0,0,0,0.704217098883403,0,0,0,0.216491041011214,0,0,0.5709193985953,0,0.148442139064825,0,0,0,0.301445281105245,0.352766121407114,0.251333182659351,0,0,0,0.323533699894818,1.10420759230197,0.484875253135222,0,1.75668478206928,2.93225389538837,0.510914110417183,0,0,0.254140454146129,0.748953197024114,0.457500602818626,0.251308704225729,2.9550134432687,1.53429274398198,1.66230435647648,0.811206315338788,0.101839363850316,0.124406970610093,0,0,0.260240885925407,0.229902104433473,0.360124259610698,0.90422890701429,0.476255494059295,0.384341160854549,0.655912071918102,1.03481348295606,0,0,0.351902248327898,0.219195732427575,0.278047249225598,0,0.61734640922383,0.199034266818493,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0.617068451549513,0.465067889500816,0.268273401399619,0.467061369468678,0.329119699826961,0.164167464079095,0.405344047729279,0.730999937126662,0.658650345873152,0.268412837520744,1.05144974282064,1.54356918568927,0.330418782983798,0,0,0.232236671860439,0,0.201683524623343,0.444756087689741,0,0,0.329397909448022,0,0.397912944082302,0,0.898819408654221,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0,0.938760993154008,0,0,0.390267295715598,0.945810864637146,0.44292937929755,0.159454768657487,0.655453258862952,0,0.433947175744535,0,0,0,0,1.60550589987792,1.28932855251423,0,1.26235463602186,0,0.780877488593277,0,0.955875191810208,1.11399337041197,0,0.809621403349789,0,1.18586333383957,1.28528526568723,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0.354680467284547,0.356737635204141,0,0,0,0,0,0.16488625294148,0.322928853391811,0.120625849856312,0.238744688006273,0.820704498725306,0,1.11255181206306,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.432021363287205,0.836353184057875,0.218362563746178,0.674321731924103,0.41326727862668,0.523511883968059,0.129614973291793,0,0,0.149516546043979,0,0,0,0,0.234714477291508,0.2604087696879,0.943734099831398,0,0,0,0.202725215290164,0.102710957164827,0,0.358053391334963,0.39736270956253,0,0.147689527174577,0.100966449948148,0.15241361331,0,0.38983152295901,0.481059208201647,0.116876902181569,0.226730383615211,0,0,0,0.386379188064381,0,0,0,0,1.6942555278512,1.38097570952153,1.71868654031819,2.06223818812425,1.37016503954128,1.5107877947794,0,1.35096360967266,0.453142408984205,1.03552062350364,0.207574695168353,0.798049746802062,0.170733605754134,0.243106717068294,0.419226325255965,0,0.666740183404846,0.618105171716683,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.655490552289177,0.704276676453562,0.574354689556133,0.476293691283074,0.927074607558844,0.38581844092741,0,0.294397840268795,0.685738504770831,0.354951612318675,0.238436189947321,0.290692833264657,0.846984423737976,0.0846146078916765,0.73171189149109,1.05227884575137,0.407412341537585,0,0.830445126869219,0.689531376628944,0.818462086339379,0.619747364743864,0.578719832943424,0.249810577937946,0.233931608445408,0.644613162144895,0,0.441182838239031,0.463735671240843|short_description=p5@Tnik}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:665113
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=uniprot:B9EKN8,uniprot:B2RQ80
|association_with_transcript=4bp_to_ENSMUST00000159680,ENSMUST00000160307,ENSMUST00000162037_5end
|cluster_id=chr3:28162489..28162499,+
|description=CAGE_peak_5_at_Tnik_5end
|id=chr3:28162489..28162499,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!7.76e-09!102;UBERON:0000924!7.76e-09!102;UBERON:0006601!7.76e-09!102;UBERON:0002346!9.24e-09!71;UBERON:0003075!9.24e-09!71;UBERON:0007284!9.24e-09!71;UBERON:0000033!1.05e-08!63;UBERON:0001049!1.65e-08!52;UBERON:0005068!1.65e-08!52;UBERON:0006241!1.65e-08!52;UBERON:0007135!1.65e-08!52;UBERON:0000073!3.12e-08!75;UBERON:0001016!3.12e-08!75;UBERON:0002020!1.50e-07!34;UBERON:0001017!1.70e-07!73;UBERON:0005743!1.70e-07!73;UBERON:0000955!3.72e-07!50;UBERON:0006238!3.72e-07!50;UBERON:0003056!5.07e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0002021,9.18e-22,10;UBERON:0000411,9.18e-22,10;UBERON:0001950,9.18e-22,10;UBERON:0002619,4.07e-19,17;UBERON:0000955,7.24e-19,47;UBERON:0006238,7.24e-19,47;UBERON:0000956,1.30e-18,21;UBERON:0001869,1.30e-18,21;UBERON:0000203,1.30e-18,21;UBERON:0002616,5.28e-17,46;UBERON:0001049,1.10e-16,52;UBERON:0005068,1.10e-16,52;UBERON:0006241,1.10e-16,52;UBERON:0007135,1.10e-16,52;UBERON:0001017,9.22e-16,73;UBERON:0001016,3.07e-15,75;UBERON:0002346,1.35e-14,64;UBERON:0003075,1.35e-14,64;UBERON:0007284,1.35e-14,64;UBERON:0000073,5.17e-14,54;UBERON:0003528,6.40e-13,29;UBERON:0002791,6.40e-13,29;UBERON:0001893,6.40e-13,29;UBERON:0004121,1.51e-12,95;UBERON:0000924,1.51e-12,95;UBERON:0006601,1.51e-12,95;UBERON:0010371,2.32e-12,73;UBERON:0002780,5.50e-11,39;UBERON:0001890,5.50e-11,39;UBERON:0006240,5.50e-11,39;UBERON:0002020,1.01e-10,34;UBERON:0003080,1.18e-10,40;UBERON:0004733,4.57e-10,6;UBERON:0004732,4.57e-10,6;UBERON:0002028,4.57e-10,6;UBERON:0007277,4.57e-10,6;UBERON:0003056,9.45e-10,49;UBERON:0010314,4.48e-09,92;UBERON:0001896,4.70e-08,2;UBERON:0002298,4.70e-08,2;UBERON:0005290,4.70e-08,2;UBERON:0010096,4.70e-08,2;UBERON:0003076,2.49e-07,12;UBERON:0003057,2.49e-07,12
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0.129123323441576,0.140788722151667,0,0,0.0797721589953364,0,0.0874204024189974,0,0,0,0,0.137114433605739,0,1.02051948181284,0,0,0,0.22940928106717,0,0,0,0,0,0,0.635030673459631,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0.515672092277442,0.606949382578793,0,0,0,0,0,0,0,0,0,0.518448061542388,0.270011876663381,0.420649922702764,0.571301968807607,0.662605622854841,0.367472397644862,0.0958454710182364,0,0,0.638436690425939,0.307213066512487,0.131886287730194,0.274462930807229,0,0.279182999001381,0,0.763991238884051,0.589257170947335,0.284743361598206,0.559198337475902,0.757261933331841,0.755715601067855,0.579728977403356,0,0,0,0,0,0.280888840263504,0,0,0,0.704217098883403,0,0,0,0.216491041011214,0,0,0.5709193985953,0,0.148442139064825,0,0,0,0.301445281105245,0.352766121407114,0.251333182659351,0,0,0,0.323533699894818,1.10420759230197,0.484875253135222,0,1.75668478206928,2.93225389538837,0.510914110417183,0,0,0.254140454146129,0.748953197024114,0.457500602818626,0.251308704225729,2.9550134432687,1.53429274398198,1.66230435647648,0.811206315338788,0.101839363850316,0.124406970610093,0,0,0.260240885925407,0.229902104433473,0.360124259610698,0.90422890701429,0.476255494059295,0.384341160854549,0.655912071918102,1.03481348295606,0,0,0.351902248327898,0.219195732427575,0.278047249225598,0,0.61734640922383,0.199034266818493,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0.617068451549513,0.465067889500816,0.268273401399619,0.467061369468678,0.329119699826961,0.164167464079095,0.405344047729279,0.730999937126662,0.658650345873152,0.268412837520744,1.05144974282064,1.54356918568927,0.330418782983798,0,0,0.232236671860439,0,0.201683524623343,0.444756087689741,0,0,0.329397909448022,0,0.397912944082302,0,0.898819408654221,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0,0.938760993154008,0,0,0.390267295715598,0.945810864637146,0.44292937929755,0.159454768657487,0.655453258862952,0,0.433947175744535,0,0,0,0,1.60550589987792,1.28932855251423,0,1.26235463602186,0,0.780877488593277,0,0.955875191810208,1.11399337041197,0,0.809621403349789,0,1.18586333383957,1.28528526568723,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0.354680467284547,0.356737635204141,0,0,0,0,0,0.16488625294148,0.322928853391811,0.120625849856312,0.238744688006273,0.820704498725306,0,1.11255181206306,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.432021363287205,0.836353184057875,0.218362563746178,0.674321731924103,0.41326727862668,0.523511883968059,0.129614973291793,0,0,0.149516546043979,0,0,0,0,0.234714477291508,0.2604087696879,0.943734099831398,0,0,0,0.202725215290164,0.102710957164827,0,0.358053391334963,0.39736270956253,0,0.147689527174577,0.100966449948148,0.15241361331,0,0.38983152295901,0.481059208201647,0.116876902181569,0.226730383615211,0,0,0,0.386379188064381,0,0,0,0,1.6942555278512,1.38097570952153,1.71868654031819,2.06223818812425,1.37016503954128,1.5107877947794,0,1.35096360967266,0.453142408984205,1.03552062350364,0.207574695168353,0.798049746802062,0.170733605754134,0.243106717068294,0.419226325255965,0,0.666740183404846,0.618105171716683,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.655490552289177,0.704276676453562,0.574354689556133,0.476293691283074,0.927074607558844,0.38581844092741,0,0.294397840268795,0.685738504770831,0.354951612318675,0.238436189947321,0.290692833264657,0.846984423737976,0.0846146078916765,0.73171189149109,1.05227884575137,0.407412341537585,0,0.830445126869219,0.689531376628944,0.818462086339379,0.619747364743864,0.578719832943424,0.249810577937946,0.233931608445408,0.644613162144895,0,0.441182838239031,0.463735671240843
|short_description=p5@Tnik
}}

Revision as of 08:35, 6 August 2015

Short description:p5@Tnik
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Tnik_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 4bp_to_ENSMUST00000159680, ENSMUST00000160307, ENSMUST00000162037_5end
EntrezGene:665113
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Tnik

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.76
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I22.93
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D52.96
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G11.54
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.61
medulla oblongata, neonate N30.CNhs11200.1396-42A31.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
occipital lobe9.18e-2210
visual cortex9.18e-2210
neocortex9.18e-2210
regional part of cerebral cortex4.07e-1917
brain7.24e-1947
future brain7.24e-1947
cerebral cortex1.30e-1821
cerebral hemisphere1.30e-1821
pallium1.30e-1821
regional part of brain5.28e-1746
neural tube1.10e-1652
neural rod1.10e-1652
future spinal cord1.10e-1652
neural keel1.10e-1652
central nervous system9.22e-1673
nervous system3.07e-1575
neurectoderm1.35e-1464
neural plate1.35e-1464
presumptive neural plate1.35e-1464
regional part of nervous system5.17e-1454
brain grey matter6.40e-1329
regional part of telencephalon6.40e-1329
telencephalon6.40e-1329
ectoderm-derived structure1.51e-1295
ectoderm1.51e-1295
presumptive ectoderm1.51e-1295
ecto-epithelium2.32e-1273
regional part of forebrain5.50e-1139
forebrain5.50e-1139
future forebrain5.50e-1139
gray matter1.01e-1034
anterior neural tube1.18e-1040
segmental subdivision of hindbrain4.57e-106
segmental subdivision of nervous system4.57e-106
hindbrain4.57e-106
presumptive hindbrain4.57e-106
pre-chordal neural plate9.45e-1049
structure with developmental contribution from neural crest4.48e-0992
medulla oblongata4.70e-082
brainstem4.70e-082
myelencephalon4.70e-082
future myelencephalon4.70e-082
posterior neural tube2.49e-0712
chordal neural plate2.49e-0712
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