Personal tools

FFCP PHASE1:Mm9::chrX:65748600..65748616,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
Line 1: Line 1:
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=98|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:65748600..65748616,+|id=chrX:65748600..65748616,+|ontology_enrichment_celltype=CL:0000680!1.70e-16!6;CL:0000183!1.70e-16!6;CL:0000187!1.70e-16!6;CL:0000056!1.70e-16!6;CL:0000222!5.12e-14!7;CL:0000355!1.04e-10!9;CL:0000192!3.99e-09!3;CL:0000359!3.99e-09!3;CL:0002539!3.99e-09!3;CL:0000514!3.99e-09!3;CL:0002494!5.37e-09!3;CL:0000737!5.37e-09!3;CL:0000746!5.37e-09!3;CL:0000513!5.37e-09!3|ontology_enrichment_celltype_v019_2=CL:0000680,1.01e-74,6;CL:0000187,1.01e-74,6;CL:0000056,1.01e-74,6;CL:0000222,3.86e-64,7;CL:0000355,5.11e-50,9;CL:0000192,2.09e-38,3;CL:0000359,2.09e-38,3;CL:0002539,2.09e-38,3;CL:0000514,2.09e-38,3;CL:0002494,8.86e-38,3;CL:0000737,8.86e-38,3;CL:0000746,8.86e-38,3;CL:0000513,8.86e-38,3;CL:0000393,8.16e-12,39;CL:0000211,8.16e-12,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000014!1.56e-11!5;UBERON:0001003!1.56e-11!5;UBERON:0002097!1.56e-11!5;UBERON:0002199!1.56e-11!5;UBERON:0007029!1.56e-11!5;UBERON:0007376!1.56e-11!5;UBERON:0002416!1.56e-11!5;UBERON:0007383!1.56e-11!5;UBERON:0001134!1.04e-10!9;UBERON:0002036!1.04e-10!9;UBERON:0002385!1.04e-10!9;UBERON:0000486!1.04e-10!9;UBERON:0001015!1.04e-10!9;UBERON:0004290!1.04e-10!9;UBERON:0003082!1.04e-10!9;UBERON:0000383!1.49e-09!10;UBERON:0001135!3.99e-09!3;UBERON:0004237!3.99e-09!3;UBERON:0004695!3.99e-09!3;UBERON:0002111!3.99e-09!3;UBERON:0004178!3.99e-09!3;UBERON:0002329!1.32e-08!11;UBERON:0003077!1.32e-08!11;UBERON:0003059!1.32e-08!11;UBERON:0007282!1.32e-08!11;UBERON:0009618!1.32e-08!11;UBERON:0007285!1.32e-08!11;UBERON:0000914!5.93e-07!17;UBERON:0000947!6.57e-07!4;UBERON:0001637!6.57e-07!4;UBERON:0003509!6.57e-07!4;UBERON:0004573!6.57e-07!4;UBERON:0004571!6.57e-07!4;UBERON:0010191!6.57e-07!4;UBERON:0004572!6.57e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0001134,5.11e-50,9;UBERON:0002036,5.11e-50,9;UBERON:0002385,5.11e-50,9;UBERON:0000486,5.11e-50,9;UBERON:0007503,5.11e-50,9;UBERON:0001015,5.11e-50,9;UBERON:0002329,5.11e-50,9;UBERON:0003082,5.11e-50,9;UBERON:0003059,5.11e-50,9;UBERON:0007282,5.11e-50,9;UBERON:0004290,5.11e-50,9;UBERON:0009618,5.11e-50,9;UBERON:0000383,4.52e-45,10;UBERON:0007524,5.06e-41,11;UBERON:0003077,5.06e-41,11;UBERON:0007285,5.06e-41,11;UBERON:0001135,2.09e-38,3;UBERON:0004237,2.09e-38,3;UBERON:0004695,2.09e-38,3;UBERON:0002111,2.09e-38,3;UBERON:0004178,2.09e-38,3;UBERON:0000947,4.83e-29,4;UBERON:0001637,4.83e-29,4;UBERON:0004573,4.83e-29,4;UBERON:0003509,4.83e-29,4;UBERON:0004571,4.83e-29,4;UBERON:0010191,4.83e-29,4;UBERON:0004572,4.83e-29,4;UBERON:0000055,2.06e-23,5;UBERON:0007500,2.06e-23,5;UBERON:0001981,2.06e-23,5;UBERON:0002049,2.06e-23,5;UBERON:0007798,2.06e-23,5;UBERON:0004537,2.06e-23,5;UBERON:0006965,2.06e-23,5;UBERON:0004535,7.69e-20,23;UBERON:0001009,7.69e-20,23;UBERON:0002204,2.40e-14,32;UBERON:0004872,6.41e-14,33;UBERON:0001723,2.06e-13,1;UBERON:0001033,2.06e-13,1;UBERON:0010056,2.06e-13,1;UBERON:0005256,2.89e-10,45;UBERON:0003914,7.77e-10,47;UBERON:0003104,1.31e-07,61;UBERON:0009142,1.31e-07,61;UBERON:0000165,2.35e-07,2;UBERON:0000166,2.35e-07,2;UBERON:0000930,2.35e-07,2;UBERON:0000490,4.87e-07,66;UBERON:0007100,6.55e-07,18;UBERON:0000948,6.55e-07,18;UBERON:0005498,6.55e-07,18;UBERON:0004140,6.55e-07,18;UBERON:0009881,6.55e-07,18;UBERON:0004141,6.55e-07,18;UBERON:0003084,6.55e-07,18;UBERON:0007005,6.55e-07,18;UBERON:0004139,6.55e-07,18;UBERON:0004291,6.55e-07,18|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,7.93149953246137,8.21153142878068,4.40512205188036,0,0,0,0,0,0,0,0,0,4.88792928468299,2.57880095944881,5.15672092277442,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323533699894818,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491804836130026,0,0,0,0,0.477937595905104,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.21183207086382,0,0.16488625294148,0.161464426695906,0.180938774784468,0.596861720015682,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58711268530648,0,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0.177475806159338,0,0,0,0.0846146078916765,0,0,0,0,0,0,0.409231043169689,0.154936841185966,0,0,0,0.644613162144895,0,0,0.695603506861264|short_description=p@chrX:65748600..65748616,+}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=98
|TSSclassifier=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chrX:65748600..65748616,+
|description=CAGE_peak_at_chrX:65748600..65748616,+
|id=chrX:65748600..65748616,+
|ontology_enrichment_celltype=CL:0000680!1.70e-16!6;CL:0000183!1.70e-16!6;CL:0000187!1.70e-16!6;CL:0000056!1.70e-16!6;CL:0000222!5.12e-14!7;CL:0000355!1.04e-10!9;CL:0000192!3.99e-09!3;CL:0000359!3.99e-09!3;CL:0002539!3.99e-09!3;CL:0000514!3.99e-09!3;CL:0002494!5.37e-09!3;CL:0000737!5.37e-09!3;CL:0000746!5.37e-09!3;CL:0000513!5.37e-09!3
|ontology_enrichment_celltype_v019_2=CL:0000680,1.01e-74,6;CL:0000187,1.01e-74,6;CL:0000056,1.01e-74,6;CL:0000222,3.86e-64,7;CL:0000355,5.11e-50,9;CL:0000192,2.09e-38,3;CL:0000359,2.09e-38,3;CL:0002539,2.09e-38,3;CL:0000514,2.09e-38,3;CL:0002494,8.86e-38,3;CL:0000737,8.86e-38,3;CL:0000746,8.86e-38,3;CL:0000513,8.86e-38,3;CL:0000393,8.16e-12,39;CL:0000211,8.16e-12,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000014!1.56e-11!5;UBERON:0001003!1.56e-11!5;UBERON:0002097!1.56e-11!5;UBERON:0002199!1.56e-11!5;UBERON:0007029!1.56e-11!5;UBERON:0007376!1.56e-11!5;UBERON:0002416!1.56e-11!5;UBERON:0007383!1.56e-11!5;UBERON:0001134!1.04e-10!9;UBERON:0002036!1.04e-10!9;UBERON:0002385!1.04e-10!9;UBERON:0000486!1.04e-10!9;UBERON:0001015!1.04e-10!9;UBERON:0004290!1.04e-10!9;UBERON:0003082!1.04e-10!9;UBERON:0000383!1.49e-09!10;UBERON:0001135!3.99e-09!3;UBERON:0004237!3.99e-09!3;UBERON:0004695!3.99e-09!3;UBERON:0002111!3.99e-09!3;UBERON:0004178!3.99e-09!3;UBERON:0002329!1.32e-08!11;UBERON:0003077!1.32e-08!11;UBERON:0003059!1.32e-08!11;UBERON:0007282!1.32e-08!11;UBERON:0009618!1.32e-08!11;UBERON:0007285!1.32e-08!11;UBERON:0000914!5.93e-07!17;UBERON:0000947!6.57e-07!4;UBERON:0001637!6.57e-07!4;UBERON:0003509!6.57e-07!4;UBERON:0004573!6.57e-07!4;UBERON:0004571!6.57e-07!4;UBERON:0010191!6.57e-07!4;UBERON:0004572!6.57e-07!4
|ontology_enrichment_uberon_v019_2=UBERON:0001134,5.11e-50,9;UBERON:0002036,5.11e-50,9;UBERON:0002385,5.11e-50,9;UBERON:0000486,5.11e-50,9;UBERON:0007503,5.11e-50,9;UBERON:0001015,5.11e-50,9;UBERON:0002329,5.11e-50,9;UBERON:0003082,5.11e-50,9;UBERON:0003059,5.11e-50,9;UBERON:0007282,5.11e-50,9;UBERON:0004290,5.11e-50,9;UBERON:0009618,5.11e-50,9;UBERON:0000383,4.52e-45,10;UBERON:0007524,5.06e-41,11;UBERON:0003077,5.06e-41,11;UBERON:0007285,5.06e-41,11;UBERON:0001135,2.09e-38,3;UBERON:0004237,2.09e-38,3;UBERON:0004695,2.09e-38,3;UBERON:0002111,2.09e-38,3;UBERON:0004178,2.09e-38,3;UBERON:0000947,4.83e-29,4;UBERON:0001637,4.83e-29,4;UBERON:0004573,4.83e-29,4;UBERON:0003509,4.83e-29,4;UBERON:0004571,4.83e-29,4;UBERON:0010191,4.83e-29,4;UBERON:0004572,4.83e-29,4;UBERON:0000055,2.06e-23,5;UBERON:0007500,2.06e-23,5;UBERON:0001981,2.06e-23,5;UBERON:0002049,2.06e-23,5;UBERON:0007798,2.06e-23,5;UBERON:0004537,2.06e-23,5;UBERON:0006965,2.06e-23,5;UBERON:0004535,7.69e-20,23;UBERON:0001009,7.69e-20,23;UBERON:0002204,2.40e-14,32;UBERON:0004872,6.41e-14,33;UBERON:0001723,2.06e-13,1;UBERON:0001033,2.06e-13,1;UBERON:0010056,2.06e-13,1;UBERON:0005256,2.89e-10,45;UBERON:0003914,7.77e-10,47;UBERON:0003104,1.31e-07,61;UBERON:0009142,1.31e-07,61;UBERON:0000165,2.35e-07,2;UBERON:0000166,2.35e-07,2;UBERON:0000930,2.35e-07,2;UBERON:0000490,4.87e-07,66;UBERON:0007100,6.55e-07,18;UBERON:0000948,6.55e-07,18;UBERON:0005498,6.55e-07,18;UBERON:0004140,6.55e-07,18;UBERON:0009881,6.55e-07,18;UBERON:0004141,6.55e-07,18;UBERON:0003084,6.55e-07,18;UBERON:0007005,6.55e-07,18;UBERON:0004139,6.55e-07,18;UBERON:0004291,6.55e-07,18
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,7.93149953246137,8.21153142878068,4.40512205188036,0,0,0,0,0,0,0,0,0,4.88792928468299,2.57880095944881,5.15672092277442,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323533699894818,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491804836130026,0,0,0,0,0.477937595905104,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.21183207086382,0,0.16488625294148,0.161464426695906,0.180938774784468,0.596861720015682,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58711268530648,0,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0.177475806159338,0,0,0,0.0846146078916765,0,0,0,0,0,0,0.409231043169689,0.154936841185966,0,0,0,0.644613162144895,0,0,0.695603506861264
|short_description=p@chrX:65748600..65748616,+
}}

Latest revision as of 09:18, 6 August 2015

Short description:p@chrX:65748600..65748616, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chrX:65748600..65748616, +
Coexpression cluster:MCL_coexpression_mm9:98
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression



0
2
4
6
8
10




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chrX:65748600..65748616,%2B&oldid=4004073"