FFCP PHASE1:Hg19::chr19:12444491..12444517,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:12444491..12444517,- to FFCP PHASE1:Hg19::chr19:12444491..12444517,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=147837 | |EntrezGene=147837 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30498 | |HGNC=30498 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TA94 | |UniProt=Q8TA94 | ||
|association_with_transcript=0bp_to_ENST00000293725_5end | |||
|cluster_id=chr19:12444491..12444517,- | |||
|description=CAGE_peak_4_at_ZNF563_5end | |||
|id=chr19:12444491..12444517,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000990;5.29e-09;8!CL:0000453;8.34e-08;5!CL:0000945;1.61e-07;24!CL:0000451;4.97e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000990,1.41e-09,8;CL:0000453,6.69e-08,5;CL:0000945,1.56e-07,24;CL:0000826,1.56e-07,24;CL:0000451,1.76e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.34e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.28e-24!115;UBERON:0001049!1.06e-11!57;UBERON:0005068!1.06e-11!57;UBERON:0006241!1.06e-11!57;UBERON:0007135!1.06e-11!57;UBERON:0002616!7.20e-11!59;UBERON:0000955!1.46e-09!69;UBERON:0006238!1.46e-09!69;UBERON:0003080!1.94e-09!42;UBERON:0002780!2.68e-09!41;UBERON:0001890!2.68e-09!41;UBERON:0006240!2.68e-09!41;UBERON:0001017!3.81e-09!82;UBERON:0005743!8.24e-09!86;UBERON:0003075!1.09e-08!86;UBERON:0007284!1.09e-08!86;UBERON:0000073!1.01e-07!94;UBERON:0001016!1.01e-07!94;UBERON:0002346!1.23e-07!90;UBERON:0000033!4.86e-07!123;UBERON:0000153!7.24e-07!129;UBERON:0007811!7.24e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.64e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.38e-20,114;UBERON:0001049,1.64e-10,56;UBERON:0005068,1.64e-10,56;UBERON:0006241,1.64e-10,56;UBERON:0007135,1.64e-10,56;UBERON:0000073,1.60e-09,53;UBERON:0002616,1.60e-09,53;UBERON:0003075,2.89e-08,82;UBERON:0007284,2.89e-08,82;UBERON:0002346,1.71e-07,86;UBERON:0002780,2.41e-07,41;UBERON:0001890,2.41e-07,41;UBERON:0003080,2.41e-07,41;UBERON:0006240,2.41e-07,41;UBERON:0002784,8.82e-07,4 | |||
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| ||
|short_description=p4@ZNF563 | |||
}} | }} |
Latest revision as of 17:32, 15 September 2015
Short description: | p4@ZNF563 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ZNF563_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000293725_5end |
EntrezGene: | ZNF563 |
HGNC: | 30498 |
UniProt: | Q8TA94 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
conventional dendritic cell | 1.41e-09 | 8 |
Langerhans cell | 6.69e-08 | 5 |
lymphocyte of B lineage | 1.56e-07 | 24 |
pro-B cell | 1.56e-07 | 24 |
dendritic cell | 1.76e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.38e-20 | 114 |
neural tube | 1.64e-10 | 56 |
neural rod | 1.64e-10 | 56 |
future spinal cord | 1.64e-10 | 56 |
neural keel | 1.64e-10 | 56 |
regional part of nervous system | 1.60e-09 | 53 |
regional part of brain | 1.60e-09 | 53 |
neural plate | 2.89e-08 | 82 |
presumptive neural plate | 2.89e-08 | 82 |
neurectoderm | 1.71e-07 | 86 |
regional part of forebrain | 2.41e-07 | 41 |
forebrain | 2.41e-07 | 41 |
anterior neural tube | 2.41e-07 | 41 |
future forebrain | 2.41e-07 | 41 |
regional part of diencephalon | 8.82e-07 | 4 |