FFCP PHASE1:Hg19::chrX:48325956..48325972,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92745 | |EntrezGene=92745 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18070 | |HGNC=18070 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WUX1 | |UniProt=Q8WUX1 | ||
|association_with_transcript=-76bp_to_ENST00000376875,uc004djk.3_5end | |association_with_transcript=-76bp_to_ENST00000376875,uc004djk.3_5end | ||
|cluster_id=chrX:48325956..48325972,- | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_9_at_SLC38A5_5end | |description=CAGE_peak_9_at_SLC38A5_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000764;6.87e-11;2!CL:0000558;6.87e-11;2!CL:0000349;3.62e-08;19!CL:0002577;3.60e-07;3!CL:0002541;4.27e-07;3 | |ontology_enrichment_celltype_v019=CL:0000764;6.87e-11;2!CL:0000558;6.87e-11;2!CL:0000349;3.62e-08;19!CL:0002577;3.60e-07;3!CL:0002541;4.27e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000764,7.23e-11,2;CL:0000765,7.23e-11,2;CL:0000050,7.23e-11,2;CL:0000038,7.23e-11,2;CL:0000558,7.23e-11,2;CL:0000547,7.23e-11,2;CL:0000549,7.23e-11,2;CL:0000550,7.23e-11,2;CL:0000552,7.23e-11,2;CL:0000349,3.28e-08,19;CL:0002577,2.89e-07,3;CL:0002541,3.60e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!3.81e-08!14;UBERON:0000158!3.81e-08!14;UBERON:0003124!7.80e-08!7 | |ontology_enrichment_uberon=UBERON:0005631!3.81e-08!14;UBERON:0000158!3.81e-08!14;UBERON:0003124!7.80e-08!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.34e-26;15!UBERON:0000179;7.34e-26;15!UBERON:0000463;7.34e-26;15!UBERON:0002390;8.08e-13;32!UBERON:0005631;1.81e-07;10!UBERON:0000158;1.81e-07;10!UBERON:0003124;4.27e-07;3!UBERON:0000920;4.27e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0000178;7.34e-26;15!UBERON:0000179;7.34e-26;15!UBERON:0000463;7.34e-26;15!UBERON:0002390;8.08e-13;32!UBERON:0005631;1.81e-07;10!UBERON:0000158;1.81e-07;10!UBERON:0003124;4.27e-07;3!UBERON:0000920;4.27e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.37e-26,15;UBERON:0000179,7.37e-26,15;UBERON:0000463,7.37e-26,15;UBERON:0005631,2.36e-11,14;UBERON:0000158,2.36e-11,14;UBERON:0003124,5.68e-11,7;UBERON:0000920,3.60e-07,3 | |||
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| ||
|short_description=p9@SLC38A5 | |short_description=p9@SLC38A5 | ||
}} | }} |
Latest revision as of 18:02, 15 September 2015
Short description: | p9@SLC38A5 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SLC38A5_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -76bp_to_ENST00000376875, uc004djk.3_5end |
EntrezGene: | SLC38A5 |
HGNC: | 18070 |
UniProt: | Q8WUX1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 7.23e-11 | 2 |
erythroblast | 7.23e-11 | 2 |
megakaryocyte-erythroid progenitor cell | 7.23e-11 | 2 |
erythroid progenitor cell | 7.23e-11 | 2 |
reticulocyte | 7.23e-11 | 2 |
proerythroblast | 7.23e-11 | 2 |
basophilic erythroblast | 7.23e-11 | 2 |
polychromatophilic erythroblast | 7.23e-11 | 2 |
orthochromatic erythroblast | 7.23e-11 | 2 |
extraembryonic cell | 3.28e-08 | 19 |
placental epithelial cell | 2.89e-07 | 3 |
chorionic membrane mesenchymal stem cell | 3.60e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 7.37e-26 | 15 |
haemolymphatic fluid | 7.37e-26 | 15 |
organism substance | 7.37e-26 | 15 |
extraembryonic membrane | 2.36e-11 | 14 |
membranous layer | 2.36e-11 | 14 |
chorion | 5.68e-11 | 7 |
egg chorion | 3.60e-07 | 3 |