FFCP PHASE1:Hg19::chr14:69726968..69726987,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57452 | |EntrezGene=57452 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23233 | |HGNC=23233 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-20bp_to_ENST00000553669_5end | |association_with_transcript=-20bp_to_ENST00000553669_5end | ||
|cluster_id=chr14:69726968..69726987,+ | |||
|description=CAGE_peak_5_at_GALNTL1_5end | |description=CAGE_peak_5_at_GALNTL1_5end | ||
|id=chr14:69726968..69726987,+ | |id=chr14:69726968..69726987,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.28e-09;5!CL:0000128;6.11e-07;7!CL:0000126;6.11e-07;7!CL:0000127;6.11e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,6.58e-07,7;CL:0000126,6.58e-07,7;CL:0000127,6.58e-07,7;CL:0002453,6.58e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0010226;1.07e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.41e-22;2!DOID:178;4.29e-12;1!DOID:326;4.29e-12;1!DOID:3978;4.29e-12;1!DOID:3394;4.29e-12;1!DOID:5844;4.29e-12;1!DOID:1287;8.88e-12;4!DOID:6193;1.07e-11;1!DOID:169;3.70e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.34e-22,2;DOID:178,4.06e-12,1;DOID:326,4.06e-12,1;DOID:3978,4.06e-12,1;DOID:3394,4.06e-12,1;DOID:5844,4.06e-12,1;DOID:6193,8.64e-12,1;DOID:1287,8.65e-12,4;DOID:169,3.39e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.26e-31!115;UBERON:0001049!1.84e-26!57;UBERON:0005068!1.84e-26!57;UBERON:0006241!1.84e-26!57;UBERON:0007135!1.84e-26!57;UBERON:0003075!2.77e-25!86;UBERON:0007284!2.77e-25!86;UBERON:0002346!1.37e-24!90;UBERON:0001017!1.93e-24!82;UBERON:0001869!1.19e-23!32;UBERON:0000073!1.32e-23!94;UBERON:0001016!1.32e-23!94;UBERON:0001893!1.32e-23!34;UBERON:0005743!1.41e-23!86;UBERON:0002020!1.74e-23!34;UBERON:0003528!1.74e-23!34;UBERON:0002616!3.03e-23!59;UBERON:0000956!9.32e-23!25;UBERON:0000203!9.32e-23!25;UBERON:0002791!2.00e-22!33;UBERON:0003080!7.14e-21!42;UBERON:0000955!3.11e-20!69;UBERON:0006238!3.11e-20!69;UBERON:0002780!9.74e-20!41;UBERON:0001890!9.74e-20!41;UBERON:0006240!9.74e-20!41;UBERON:0002619!1.44e-19!22;UBERON:0003056!7.79e-18!61;UBERON:0001950!3.39e-17!20;UBERON:0004121!1.71e-14!169;UBERON:0000924!2.12e-14!173;UBERON:0006601!2.12e-14!173;UBERON:0000153!2.57e-13!129;UBERON:0007811!2.57e-13!129;UBERON:0000033!3.20e-13!123;UBERON:0000481!5.38e-12!347;UBERON:0000064!8.47e-12!219;UBERON:0000025!3.92e-09!194;UBERON:0000483!5.82e-09!309;UBERON:0000119!1.13e-08!312;UBERON:0000477!3.90e-08!286;UBERON:0000922!5.01e-08!612;UBERON:0000062!1.26e-07!511;UBERON:0000468!1.46e-07!659;UBERON:0004111!1.74e-07!241;UBERON:0001871!1.92e-07!7;UBERON:0002050!2.81e-07!605;UBERON:0005423!2.81e-07!605;UBERON:0001872!3.48e-07!5;UBERON:0000475!5.90e-07!365;UBERON:0000923!6.31e-07!604;UBERON:0005291!6.31e-07!604;UBERON:0006598!6.31e-07!604;UBERON:0002532!6.31e-07!604;UBERON:0003076!8.04e-07!15;UBERON:0003057!8.04e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002426;4.29e-12;1!UBERON:0003831;4.29e-12;1!UBERON:0003898;4.29e-12;1!UBERON:0004830;4.29e-12;1!UBERON:0003830;4.29e-12;1!UBERON:0005175;4.29e-12;1!UBERON:0001774;4.29e-12;1!UBERON:0001103;4.29e-12;1!UBERON:0002084;1.07e-11;1!UBERON:0002146;1.07e-11;1!UBERON:0002082;1.07e-11;1!UBERON:0005623;1.07e-11;1!UBERON:0007100;1.92e-10;25!UBERON:0000013;1.28e-09;5!UBERON:0002410;1.28e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,5.05e-12,1;UBERON:0003831,5.05e-12,1;UBERON:0003898,5.05e-12,1;UBERON:0004830,5.05e-12,1;UBERON:0003830,5.05e-12,1;UBERON:0005175,5.05e-12,1;UBERON:0001774,5.05e-12,1;UBERON:0001103,5.05e-12,1;UBERON:0010084,5.05e-12,1;UBERON:0002084,6.26e-12,1;UBERON:0002082,6.26e-12,1;UBERON:0010226,6.26e-12,1;UBERON:0002146,1.63e-11,1;UBERON:0005623,1.63e-11,1;UBERON:0007100,1.07e-09,27;UBERON:0000013,1.15e-09,5;UBERON:0002410,1.15e-09,5 | |||
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|short_description=p5@GALNTL1 | |short_description=p5@GALNTL1 | ||
}} | }} |
Latest revision as of 18:06, 15 September 2015
Short description: | p5@GALNTL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GALNTL1_5end |
Coexpression cluster: | NA |
Association with transcript: | -20bp_to_ENST00000553669_5end |
EntrezGene: | GALNTL1 |
HGNC: | 23233 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 6.58e-07 | 7 |
macroglial cell | 6.58e-07 | 7 |
astrocyte | 6.58e-07 | 7 |
oligodendrocyte precursor cell | 6.58e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 5.05e-12 | 1 |
respiratory system muscle | 5.05e-12 | 1 |
skeletal muscle of trunk | 5.05e-12 | 1 |
respiratory system skeletal muscle | 5.05e-12 | 1 |
thoracic segment muscle | 5.05e-12 | 1 |
chest organ | 5.05e-12 | 1 |
muscle of trunk | 5.05e-12 | 1 |
diaphragm | 5.05e-12 | 1 |
future diaphragm | 5.05e-12 | 1 |
heart left ventricle | 6.26e-12 | 1 |
cardiac ventricle | 6.26e-12 | 1 |
future cardiac ventricle | 6.26e-12 | 1 |
pulmonary valve | 1.63e-11 | 1 |
semi-lunar valve | 1.63e-11 | 1 |
primary circulatory organ | 1.07e-09 | 27 |
sympathetic nervous system | 1.15e-09 | 5 |
autonomic nervous system | 1.15e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.34e-22 | 2 |
vascular disease | 4.06e-12 | 1 |
ischemia | 4.06e-12 | 1 |
extrinsic cardiomyopathy | 4.06e-12 | 1 |
myocardial ischemia | 4.06e-12 | 1 |
myocardial infarction | 4.06e-12 | 1 |
epithelioid sarcoma | 8.64e-12 | 1 |
cardiovascular system disease | 8.65e-12 | 4 |
neuroendocrine tumor | 3.39e-08 | 6 |