FFCP PHASE1:Hg19::chr3:147111317..147111328,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7545 | |EntrezGene=7545 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12872 | |HGNC=12872 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=108bp_to_ENST00000472523_5end | |association_with_transcript=108bp_to_ENST00000472523_5end | ||
|cluster_id=chr3:147111317..147111328,+ | |||
|coexpression_cluster_id=C2723 | |||
|description=CAGE_peak_8_at_ZIC1_5end | |description=CAGE_peak_8_at_ZIC1_5end | ||
|id=chr3:147111317..147111328,+ | |id=chr3:147111317..147111328,+ | ||
|ontology_enrichment_celltype=CL:0002620!2.99e-10!23;CL:0002319!1.37e-09!25;CL:0000095!3.29e-09!17;CL:0000123!3.29e-09!17;CL:0000243!4.40e-09!15;CL:0000125!4.40e-09!15;CL:0000030!4.40e-09!15;CL:0000339!4.40e-09!15;CL:0000128!5.31e-07!7;CL:0000126!5.31e-07!7;CL:0000127!5.31e-07!7;CL:0002453!5.31e-07!7;CL:0000133!8.38e-07!59 | |ontology_enrichment_celltype=CL:0002620!2.99e-10!23;CL:0002319!1.37e-09!25;CL:0000095!3.29e-09!17;CL:0000123!3.29e-09!17;CL:0000243!4.40e-09!15;CL:0000125!4.40e-09!15;CL:0000030!4.40e-09!15;CL:0000339!4.40e-09!15;CL:0000128!5.31e-07!7;CL:0000126!5.31e-07!7;CL:0000127!5.31e-07!7;CL:0002453!5.31e-07!7;CL:0000133!8.38e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000708;7.65e-19;3!CL:0000064;1.89e-17;3!CL:0000067;1.89e-17;3!CL:0005012;1.89e-17;3!CL:0002304;1.89e-17;3!CL:0002575;2.28e-13;2!CL:0002549;3.91e-13;2!CL:0000047;1.56e-12;2!CL:0002561;1.56e-12;2!CL:0002559;3.86e-11;5!CL:0002590;8.08e-09;3!CL:0002564;1.21e-08;3!CL:0002603;1.95e-08;3!CL:0000669;4.31e-07;4!CL:0000228;6.12e-07;1!CL:0002372;6.12e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000708,7.68e-19,3;CL:0000064,6.35e-18,3;CL:0000067,6.35e-18,3;CL:0005012,6.35e-18,3;CL:0002304,6.35e-18,3;CL:0002575,2.29e-13,2;CL:0002549,3.93e-13,2;CL:0002561,1.01e-12,2;CL:0002559,2.88e-11,5;CL:0002590,9.45e-09,3;CL:0002564,1.56e-08,3;CL:0002603,2.03e-08,3;CL:0000221,2.57e-07,72;CL:0000669,4.31e-07,4;CL:0000228,5.78e-07,1;CL:0002372,5.78e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.70e-18;3 | |||
|ontology_enrichment_disease=DOID:17!4.31e-08!5;DOID:450!4.31e-08!5;DOID:66!4.31e-08!5;DOID:423!4.31e-08!5;DOID:0080000!4.31e-08!5;DOID:11722!4.31e-08!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.73e-45!82;UBERON:0005743!5.75e-44!86;UBERON:0000955!1.95e-43!69;UBERON:0006238!1.95e-43!69;UBERON:0000073!3.77e-43!94;UBERON:0001016!3.77e-43!94;UBERON:0002616!7.03e-40!59;UBERON:0001049!1.22e-34!57;UBERON:0005068!1.22e-34!57;UBERON:0006241!1.22e-34!57;UBERON:0007135!1.22e-34!57;UBERON:0003075!2.95e-28!86;UBERON:0007284!2.95e-28!86;UBERON:0002346!2.51e-26!90;UBERON:0000033!1.39e-25!123;UBERON:0004121!5.54e-24!169;UBERON:0000153!1.37e-23!129;UBERON:0007811!1.37e-23!129;UBERON:0000924!5.73e-23!173;UBERON:0006601!5.73e-23!173;UBERON:0002780!5.55e-20!41;UBERON:0001890!5.55e-20!41;UBERON:0006240!5.55e-20!41;UBERON:0003080!2.58e-19!42;UBERON:0003056!2.29e-18!61;UBERON:0003076!4.39e-18!15;UBERON:0003057!4.39e-18!15;UBERON:0004733!3.31e-17!12;UBERON:0002028!3.31e-17!12;UBERON:0007277!3.31e-17!12;UBERON:0001893!3.81e-16!34;UBERON:0002020!7.29e-16!34;UBERON:0003528!7.29e-16!34;UBERON:0004732!1.30e-15!13;UBERON:0002791!2.81e-15!33;UBERON:0001869!3.71e-14!32;UBERON:0002680!2.71e-13!9;UBERON:0001895!2.71e-13!9;UBERON:0010092!2.71e-13!9;UBERON:0007023!1.59e-12!115;UBERON:0000475!3.69e-12!365;UBERON:0002200!1.89e-11!11;UBERON:0006876!1.89e-11!11;UBERON:0002037!2.20e-10!6;UBERON:0006215!2.20e-10!6;UBERON:0000956!3.73e-09!25;UBERON:0000203!3.73e-09!25;UBERON:0002308!3.89e-09!9;UBERON:0000125!3.89e-09!9;UBERON:0005284!5.61e-09!5;UBERON:0000119!1.16e-08!312;UBERON:0002619!2.97e-08!22;UBERON:0002298!3.72e-08!8;UBERON:0000483!2.40e-07!309;UBERON:0009663!3.12e-07!7;UBERON:0000488!3.26e-07!4;UBERON:0002097!4.16e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0006876;4.79e-25;11!UBERON:0002037;1.34e-23;6!UBERON:0005284;2.29e-19;5!UBERON:0003210;7.65e-19;3!UBERON:0001778;1.89e-17;3!UBERON:0001775;1.89e-17;3!UBERON:0002680;1.10e-15;9!UBERON:0001895;1.10e-15;9!UBERON:0000488;3.13e-13;4!UBERON:0005629;3.91e-13;2!UBERON:0005358;3.91e-13;2!UBERON:0001886;3.91e-13;2!UBERON:0004086;3.91e-13;2!UBERON:0005282;3.91e-13;2!UBERON:0005281;3.91e-13;2!UBERON:0005933;1.56e-12;2!UBERON:0005942;1.56e-12;2!UBERON:0005932;1.56e-12;2!UBERON:0004733;1.02e-11;12!UBERON:0002028;1.02e-11;12!UBERON:0002073;3.86e-11;5!UBERON:0004732;8.48e-11;13!UBERON:0002203;5.48e-09;6!UBERON:0001768;5.48e-09;6!UBERON:0002200;5.48e-09;6!UBERON:0002242;1.21e-08;3!UBERON:0007625;2.37e-08;11!UBERON:0010371;4.79e-08;31!UBERON:0002336;6.12e-07;1!UBERON:0011215;6.12e-07;1!UBERON:0001018;6.12e-07;1!UBERON:0002473;6.12e-07;1!UBERON:0005340;6.12e-07;1!UBERON:0003544;6.12e-07;1!UBERON:0005970;6.12e-07;1!UBERON:0002316;6.12e-07;1!UBERON:0001020;6.12e-07;1!UBERON:0002437;6.12e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006876,2.79e-25,11;UBERON:0002037,1.80e-23,6;UBERON:0006215,1.80e-23,6;UBERON:0005284,2.78e-19,5;UBERON:0003210,7.68e-19,3;UBERON:0001778,6.35e-18,3;UBERON:0001775,6.35e-18,3;UBERON:0002680,1.33e-15,9;UBERON:0001895,1.33e-15,9;UBERON:0010092,1.33e-15,9;UBERON:0000488,1.40e-13,4;UBERON:0005629,3.93e-13,2;UBERON:0005358,3.93e-13,2;UBERON:0001886,3.93e-13,2;UBERON:0004086,3.93e-13,2;UBERON:0005282,3.93e-13,2;UBERON:0005281,3.93e-13,2;UBERON:0003076,4.11e-13,15;UBERON:0003057,4.11e-13,15;UBERON:0005933,1.01e-12,2;UBERON:0005942,1.01e-12,2;UBERON:0005932,1.01e-12,2;UBERON:0004733,1.18e-11,12;UBERON:0002028,1.18e-11,12;UBERON:0007277,1.18e-11,12;UBERON:0002073,2.88e-11,5;UBERON:0005086,2.88e-11,5;UBERON:0004732,9.64e-11,13;UBERON:0004121,4.50e-10,171;UBERON:0000924,4.50e-10,171;UBERON:0006601,4.50e-10,171;UBERON:0001016,2.80e-09,89;UBERON:0002203,3.22e-09,6;UBERON:0001768,3.22e-09,6;UBERON:0002200,3.22e-09,6;UBERON:0001017,4.75e-09,81;UBERON:0007625,1.48e-08,11;UBERON:0002242,1.56e-08,3;UBERON:0003068,1.56e-08,3;UBERON:0002328,1.56e-08,3;UBERON:0004880,1.56e-08,3;UBERON:0005085,2.42e-08,31;UBERON:0010371,8.37e-08,104;UBERON:0001801,9.71e-07,14 | |||
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|short_description=p8@ZIC1 | |short_description=p8@ZIC1 | ||
}} | }} |
Latest revision as of 18:12, 15 September 2015
Short description: | p8@ZIC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ZIC1_5end |
Coexpression cluster: | C2723_Pericytes_Meningeal_Smooth_Fibroblast_cerebellum_Hair_rhabdomyosarcoma |
Association with transcript: | 108bp_to_ENST00000472523_5end |
EntrezGene: | ZIC1 |
HGNC: | 12872 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leptomeningeal cell | 7.68e-19 | 3 |
ciliated cell | 6.35e-18 | 3 |
ciliated epithelial cell | 6.35e-18 | 3 |
multi-ciliated epithelial cell | 6.35e-18 | 3 |
non-pigmented ciliary epithelial cell | 6.35e-18 | 3 |
central nervous system pericyte | 2.29e-13 | 2 |
fibroblast of choroid plexus | 3.93e-13 | 2 |
outer root sheath cell | 1.01e-12 | 2 |
hair follicle cell | 2.88e-11 | 5 |
smooth muscle cell of the brain vasculature | 9.45e-09 | 3 |
nucleus pulposus cell of intervertebral disc | 1.56e-08 | 3 |
astrocyte of the cerebellum | 2.03e-08 | 3 |
ectodermal cell | 2.57e-07 | 72 |
pericyte cell | 4.31e-07 | 4 |
multinucleate cell | 5.78e-07 | 1 |
myotube | 5.78e-07 | 1 |