FFCP PHASE1:Hg19::chrX:48326646..48326667,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92745 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18070 | |||
|TSSclassifier=strong | |||
|UniProt=C9JNK4 | |||
|association_with_transcript=30bp_to_ENST00000440085_5end | |||
|cluster_id=chrX:48326646..48326667,- | |||
|coexpression_cluster_id=C2189 | |||
|description=CAGE_peak_20_at_SLC38A5_5end | |||
|id=chrX:48326646..48326667,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;4.83e-17;5!CL:0000123;3.18e-11;2!CL:0000242;3.18e-11;2!CL:0000095;4.17e-10;17!CL:0002319;2.77e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,9.05e-12,41;CL:0000242,3.02e-11,2;CL:0000095,4.17e-10,17;CL:0000123,4.17e-10,17;CL:0000133,2.53e-08,59;CL:0002319,2.77e-07,25;CL:0000221,7.24e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.97e-08;10!UBERON:0003056;5.73e-08;3 | |||
|ontology_enrichment_disease=DOID:171!2.21e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:171;1.49e-18;10!DOID:169;2.25e-14;6!DOID:3095;8.59e-09;22!DOID:2994;8.59e-09;22!DOID:3093;1.22e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.44e-18,10;DOID:169,2.18e-14,6;DOID:3095,8.47e-09,22;DOID:2994,8.47e-09,22;DOID:3093,1.24e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.62e-09!9;UBERON:0001004!1.17e-08!72;UBERON:0000065!9.79e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;4.83e-17;5!UBERON:0002410;4.83e-17;5!UBERON:0000010;6.63e-10;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,4.64e-17,5;UBERON:0002410,4.64e-17,5;UBERON:0000010,6.48e-10,8;UBERON:0001016,1.03e-07,89;UBERON:0004121,6.38e-07,171;UBERON:0000924,6.38e-07,171;UBERON:0006601,6.38e-07,171 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0.408001382488506,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0.919421224478927,0.90361775633475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0.993943903390637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0.337552664482532,0,0,0,0.161646056818812,0,0,0,0.386521706326594,0,0,0,0,0.232387885739037,0.310983165046111,0,0,0,0,0,0,0,0.473227200159376,0.674338760312407,0,0.330881918197182,0.435758888184812,0.474541238222193,0.404493924480493,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0.532844358032199,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0.773288812777695,0.837581326671744,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0.601892199455438,0,0,0,0.184369168541703,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0.160853921143607,0,0.308419387605311,0,0.164254312027618,0,0.348631135379878,0,0.200506470303285,0.0920809889358963,0.114814448164607,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0.290012154876366,0,0,0,0.107420244868274,0,0,0.445160178233687,0.661139661443912,0.192190067365106,0.638063562472921,0.10115778085555,0.464845549297286,0.62962469366128,0.6970372701606,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0.255897791311334,0.42793898803392,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0.86101074534246,0,0,0,0,0,0,0,0.411362273086194,0.648473311192717,0,0,0.106824071127473,0,0,0.185803175125719,0.144269212976445,0,0,0,0,0.211673582723883,0,0.280797178113459,0.228234679033192,0.313359791546046,0,0,0.1605880751037,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0.933118762985422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,0.533034776018635,0,0,0.166211681900156,0,0.392125068635479,0.167821586975843,0,0.158936578980379,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,1.53036380815245,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0.790446527591777,0,0,0,0,0,0,0,0,0,0,0,0,0,9.13100990579123,0,0,0,0,2.81000943484129,0,0.447764408660622,0,0.554805861502613,0,0.251567901752575,0,0,0,0.15543720058278,0.147855149989634,0,0,0,0,0,0.521745061811734,0.150257608997218,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,10.8710215608104,0,0.786329709279482,3.60391806033646,0.848662649770126,1.48802444071178,0.495743057036009,0.558644917973244,0,0,0,0,0,0,0,0.159633859057151,0,0.504143392443436,0,0,0,0.588886311006154,0.11796972334774,0,0,0,0,0.198916222116275,0,0,0.781514011233092,0,0,0,0,0,0,0.0634158101939068,2.7348740450911,0.548257766857182,0,0,0,0,0.336283722218824,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,3.00225862292181,0,0,0,0.207216164163037,0.3414369541879,0,0,0,0.170426809518315,0,0,0,0,0.111855431797792,0.687051635306701,0,0,0,0,0,0,0,0,0,5.49702583727146,0,0,0,0,0,0,0,0,0,0.169927114687817,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0.872701380680755,0,0.371995018166751,0,0.432626562123789,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p20@SLC38A5 | |||
}} |
Latest revision as of 18:13, 15 September 2015
Short description: | p20@SLC38A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_SLC38A5_5end |
Coexpression cluster: | C2189_neuroblastoma_medulloblastoma_small_retinoblastoma_parietal_temporal_acute |
Association with transcript: | 30bp_to_ENST00000440085_5end |
EntrezGene: | SLC38A5 |
HGNC: | 18070 |
UniProt: | C9JNK4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 9.05e-12 | 41 |
Merkel cell | 3.02e-11 | 2 |
neuron associated cell | 4.17e-10 | 17 |
neuron associated cell (sensu Vertebrata) | 4.17e-10 | 17 |
neurectodermal cell | 2.53e-08 | 59 |
neural cell | 2.77e-07 | 25 |
ectodermal cell | 7.24e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 4.64e-17 | 5 |
autonomic nervous system | 4.64e-17 | 5 |
peripheral nervous system | 6.48e-10 | 8 |
nervous system | 1.03e-07 | 89 |
ectoderm-derived structure | 6.38e-07 | 171 |
ectoderm | 6.38e-07 | 171 |
presumptive ectoderm | 6.38e-07 | 171 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.44e-18 | 10 |
neuroendocrine tumor | 2.18e-14 | 6 |
germ cell and embryonal cancer | 8.47e-09 | 22 |
germ cell cancer | 8.47e-09 | 22 |
nervous system cancer | 1.24e-07 | 11 |