FFCP PHASE1:Hg19::chr16:2479390..2479409,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=899 | |EntrezGene=899 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1591 | |HGNC=1591 | ||
|TSSclassifier=strong | |||
|UniProt=P41002,Q59HD0 | |UniProt=P41002,Q59HD0 | ||
|association_with_transcript=0bp_to_NM_001761,uc002cqd.1,uc002cqe.1_5end | |association_with_transcript=0bp_to_NM_001761,uc002cqd.1,uc002cqe.1_5end | ||
|cluster_id=chr16:2479390..2479409,+ | |||
|coexpression_cluster_id=C281 | |||
|description=CAGE_peak_2_at_CCNF_5end | |description=CAGE_peak_2_at_CCNF_5end | ||
|id=chr16:2479390..2479409,+ | |id=chr16:2479390..2479409,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.04e-11!254;CL:0000548!5.27e-08!679;CL:0000004!5.27e-08!679;CL:0000255!5.27e-08!679;CL:0000012!1.28e-07!682;CL:0000071!8.16e-07!18;CL:0002546!8.16e-07!18;CL:0002078!8.50e-07!44 | |ontology_enrichment_celltype=CL:0000066!5.04e-11!254;CL:0000548!5.27e-08!679;CL:0000004!5.27e-08!679;CL:0000255!5.27e-08!679;CL:0000012!1.28e-07!682;CL:0000071!8.16e-07!18;CL:0002546!8.16e-07!18;CL:0002078!8.50e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0000071;8.89e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.22e-11,253;CL:0000213,2.61e-07,58;CL:0000215,2.61e-07,58;CL:0002078,2.65e-07,45;CL:0000071,6.47e-07,18;CL:0002546,6.47e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;8.89e-07;18 | |||
|ontology_enrichment_disease=DOID:162!8.39e-19!235;DOID:14566!1.24e-17!239;DOID:2531!5.12e-15!51;DOID:0060083!5.12e-15!51;DOID:1240!4.97e-11!39;DOID:0050686!9.90e-10!137;DOID:8692!1.58e-07!31;DOID:0050687!2.17e-07!143 | |ontology_enrichment_disease=DOID:162!8.39e-19!235;DOID:14566!1.24e-17!239;DOID:2531!5.12e-15!51;DOID:0060083!5.12e-15!51;DOID:1240!4.97e-11!39;DOID:0050686!9.90e-10!137;DOID:8692!1.58e-07!31;DOID:0050687!2.17e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:2531;2.52e-09;51!DOID:0060083;2.52e-09;51!DOID:1240;8.27e-09;39!DOID:8692;2.99e-07;31!DOID:0060058;7.27e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.50e-17,235;DOID:14566,1.94e-16,239;DOID:2531,3.18e-16,51;DOID:0060083,3.18e-16,51;DOID:1240,6.18e-12,39;DOID:0050686,1.33e-09,137;DOID:8692,6.30e-08,31;DOID:0060058,9.52e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0001986!8.16e-07!18;UBERON:0004638!8.16e-07!18;UBERON:0004852!8.16e-07!18 | |ontology_enrichment_uberon=UBERON:0001986!8.16e-07!18;UBERON:0004638!8.16e-07!18;UBERON:0004852!8.16e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;8.89e-07;18!UBERON:0001986;8.89e-07;18!UBERON:0004852;8.89e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,6.47e-07,18;UBERON:0001986,6.47e-07,18;UBERON:0004852,6.47e-07,18;UBERON:0000487,8.59e-07,22 | |||
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| ||
|short_description=p2@CCNF | |short_description=p2@CCNF | ||
}} | }} |
Latest revision as of 18:46, 15 September 2015
Short description: | p2@CCNF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CCNF_5end |
Coexpression cluster: | C281_Hodgkin_Reticulocytes_chronic_NK_acute_retinoblastoma_small |
Association with transcript: | 0bp_to_NM_001761, uc002cqd.1, uc002cqe.1_5end |
EntrezGene: | CCNF |
HGNC: | 1591 |
UniProt: | P41002Q59HD0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.22e-11 | 253 |
lining cell | 2.61e-07 | 58 |
barrier cell | 2.61e-07 | 58 |
meso-epithelial cell | 2.65e-07 | 45 |
blood vessel endothelial cell | 6.47e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.47e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 6.47e-07 | 18 |
endothelium | 6.47e-07 | 18 |
cardiovascular system endothelium | 6.47e-07 | 18 |
simple squamous epithelium | 8.59e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.50e-17 | 235 |
disease of cellular proliferation | 1.94e-16 | 239 |
hematologic cancer | 3.18e-16 | 51 |
immune system cancer | 3.18e-16 | 51 |
leukemia | 6.18e-12 | 39 |
organ system cancer | 1.33e-09 | 137 |
myeloid leukemia | 6.30e-08 | 31 |
lymphoma | 9.52e-07 | 10 |