FFCP PHASE1:Hg19::chr17:4699451..4699490,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:4699451..4699490,+ to FFCP PHASE1:Hg19::chr17:4699451..4699490,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5694 | |EntrezGene=5694 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9543 | |HGNC=9543 | ||
|TSSclassifier=strong | |||
|UniProt=P28072,Q6IAT9 | |UniProt=P28072,Q6IAT9 | ||
|association_with_transcript=0bp_to_NM_002798,uc002fzb.2_5end | |||
|cluster_id=chr17:4699451..4699490,+ | |||
|coexpression_cluster_id=C3414 | |||
|description=CAGE_peak_1_at_PSMB6_5end | |||
|id=chr17:4699451..4699490,+ | |||
|ontology_enrichment_celltype=CL:0002321!5.40e-26!248;CL:0000220!3.05e-25!246;CL:0000222!3.23e-22!119;CL:0000055!5.47e-21!180;CL:0000393!2.03e-18!60;CL:0000211!2.03e-18!60;CL:0000183!1.52e-17!59;CL:0000680!8.60e-16!57;CL:0000056!8.60e-16!57;CL:0000355!8.60e-16!57;CL:0000187!1.18e-15!54;CL:0000192!3.64e-15!42;CL:0000514!3.64e-15!42;CL:0000066!1.12e-13!254;CL:0000359!3.28e-13!32;CL:0000548!3.20e-09!679;CL:0000004!3.20e-09!679;CL:0000255!3.20e-09!679;CL:0000115!4.17e-09!35;CL:0000012!1.62e-08!682;CL:0000071!3.84e-08!18;CL:0002546!3.84e-08!18;CL:0000213!7.77e-08!57;CL:0000215!7.77e-08!57;CL:0002078!7.90e-08!44;CL:0002139!8.19e-08!24;CL:0000144!3.49e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.05e-12;32!CL:0000192;1.10e-10;43!CL:0000393;2.13e-09;61!CL:0000211;2.13e-09;61!CL:0000187;9.29e-09;55!CL:0000071;3.76e-08;18!CL:0000115;4.07e-08;36!CL:0002139;8.34e-08;24!CL:1000449;7.28e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.30e-26,250;CL:0000222,1.61e-22,121;CL:0000393,3.13e-18,61;CL:0000211,3.13e-18,61;CL:0000680,1.25e-15,58;CL:0000056,1.25e-15,58;CL:0000355,1.25e-15,58;CL:0000187,1.76e-15,55;CL:0000192,6.13e-15,43;CL:0000514,6.13e-15,43;CL:0000066,1.13e-13,253;CL:0000359,3.28e-13,32;CL:0000115,1.77e-09,36;CL:0002078,3.62e-08,45;CL:0000213,3.74e-08,58;CL:0000215,3.74e-08,58;CL:0000071,3.84e-08,18;CL:0002546,3.84e-08,18;CL:0002139,8.19e-08,24;CL:1000449,7.34e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;1.10e-10;43!CL:0000355;9.98e-09;58!CL:0002546;3.76e-08;18!CL:0000222;5.43e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.66e-21!143;UBERON:0003914!3.03e-21!118;UBERON:0000119!7.96e-21!312;UBERON:0000914!9.43e-21!83;UBERON:0002329!9.43e-21!83;UBERON:0003077!9.43e-21!83;UBERON:0003059!9.43e-21!83;UBERON:0007282!9.43e-21!83;UBERON:0009618!9.43e-21!83;UBERON:0007285!9.43e-21!83;UBERON:0000483!1.45e-20!309;UBERON:0000490!7.01e-20!138;UBERON:0000481!9.38e-20!347;UBERON:0004290!3.87e-19!70;UBERON:0000486!2.02e-18!82;UBERON:0003104!2.50e-18!238;UBERON:0009142!2.50e-18!238;UBERON:0002049!6.71e-18!79;UBERON:0007798!6.71e-18!79;UBERON:0000477!9.75e-18!286;UBERON:0004872!1.16e-17!84;UBERON:0001134!5.16e-17!61;UBERON:0002036!5.16e-17!61;UBERON:0003082!5.16e-17!61;UBERON:0000055!1.55e-16!69;UBERON:0002100!3.55e-16!216;UBERON:0001981!3.82e-16!60;UBERON:0007500!3.82e-16!60;UBERON:0004537!3.82e-16!60;UBERON:0006965!3.82e-16!60;UBERON:0002385!4.95e-16!63;UBERON:0001015!4.95e-16!63;UBERON:0000383!4.95e-16!63;UBERON:0001637!1.37e-14!42;UBERON:0003509!1.37e-14!42;UBERON:0004572!1.37e-14!42;UBERON:0000475!1.50e-14!365;UBERON:0000025!3.98e-14!194;UBERON:0004111!1.02e-13!241;UBERON:0000468!5.07e-13!659;UBERON:0001009!2.18e-12!113;UBERON:0004535!2.02e-11!110;UBERON:0000922!2.07e-10!612;UBERON:0004573!3.16e-10!33;UBERON:0004571!3.16e-10!33;UBERON:0000480!7.72e-10!626;UBERON:0000467!8.50e-10!625;UBERON:0000064!2.30e-09!219;UBERON:0000923!4.19e-09!604;UBERON:0005291!4.19e-09!604;UBERON:0006598!4.19e-09!604;UBERON:0002532!4.19e-09!604;UBERON:0002050!4.62e-09!605;UBERON:0005423!4.62e-09!605;UBERON:0003103!1.62e-08!69;UBERON:0001986!3.84e-08!18;UBERON:0004638!3.84e-08!18;UBERON:0004852!3.84e-08!18;UBERON:0001737!1.77e-07!9;UBERON:0000487!2.55e-07!22;UBERON:0000072!5.22e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0007500;2.30e-10;56!UBERON:0001981;2.30e-10;56!UBERON:0004537;2.30e-10;56!UBERON:0001637;2.50e-10;42!UBERON:0003509;2.50e-10;42!UBERON:0004572;2.50e-10;42!UBERON:0003914;3.92e-10;74!UBERON:0004573;2.83e-09;33!UBERON:0004571;2.83e-09;33!UBERON:0000055;1.94e-08;65!UBERON:0002049;2.32e-08;75!UBERON:0007798;2.32e-08;75!UBERON:0004638;3.76e-08;18!UBERON:0001986;3.76e-08;18!UBERON:0004852;3.76e-08;18!UBERON:0001737;1.78e-07;9!UBERON:0001557;1.78e-07;9!UBERON:0000487;2.51e-07;22!UBERON:0000490;4.23e-07;33!UBERON:0000025;7.23e-07;93!UBERON:0006555;7.28e-07;15!UBERON:0004819;7.28e-07;15!UBERON:0001285;7.28e-07;15!UBERON:0007684;7.28e-07;15 | |||
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| ||
|short_description=p1@PSMB6 | |||
}} | }} |
Latest revision as of 19:13, 15 September 2015
Short description: | p1@PSMB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PSMB6_5end |
Coexpression cluster: | C3414_Smooth_Alveolar_Mallassezderived_mucinous_Placental_Bronchial_hepatocellular |
Association with transcript: | 0bp_to_NM_002798, uc002fzb.2_5end |
EntrezGene: | PSMB6 |
HGNC: | 9543 |
UniProt: | P28072Q6IAT9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.30e-26 | 250 |
mesodermal cell | 1.61e-22 | 121 |
electrically responsive cell | 3.13e-18 | 61 |
electrically active cell | 3.13e-18 | 61 |
muscle precursor cell | 1.25e-15 | 58 |
myoblast | 1.25e-15 | 58 |
multi-potent skeletal muscle stem cell | 1.25e-15 | 58 |
muscle cell | 1.76e-15 | 55 |
smooth muscle cell | 6.13e-15 | 43 |
smooth muscle myoblast | 6.13e-15 | 43 |
epithelial cell | 1.13e-13 | 253 |
vascular associated smooth muscle cell | 3.28e-13 | 32 |
endothelial cell | 1.77e-09 | 36 |
meso-epithelial cell | 3.62e-08 | 45 |
lining cell | 3.74e-08 | 58 |
barrier cell | 3.74e-08 | 58 |
blood vessel endothelial cell | 3.84e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.84e-08 | 18 |
endothelial cell of vascular tree | 8.19e-08 | 24 |
epithelial cell of nephron | 7.34e-07 | 15 |