FFCP PHASE1:Hg19::chr19:12862486..12862519,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54831 | |EntrezGene=54831 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17107 | |HGNC=17107 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000549706_5end | |association_with_transcript=0bp_to_ENST00000549706_5end | ||
|cluster_id=chr19:12862486..12862519,+ | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_2_at_BEST2_5end | |description=CAGE_peak_2_at_BEST2_5end | ||
|id=chr19:12862486..12862519,+ | |id=chr19:12862486..12862519,+ | ||
|ontology_enrichment_celltype=CL:0001014!1.36e-07!2;CL:0001016!1.36e-07!2 | |ontology_enrichment_celltype=CL:0001014!1.36e-07!2;CL:0001016!1.36e-07!2 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.27e-34;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007029!4.53e-14!1;UBERON:0001154!5.15e-14!1;UBERON:0001153!5.15e-14!1;UBERON:0002372!7.55e-14!1;UBERON:0001961!7.55e-14!1;UBERON:0001744!7.55e-14!1;UBERON:0001735!7.55e-14!1;UBERON:0001155!3.30e-13!9;UBERON:0000059!6.53e-11!11;UBERON:0000160!2.27e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;4.21e-21;5!UBERON:0005388;4.21e-21;5!UBERON:0001802;4.21e-21;5!UBERON:0000970;5.71e-21;20!UBERON:0002104;4.86e-20;21!UBERON:0000020;2.02e-18;23!UBERON:0001032;1.03e-17;24!UBERON:0004456;1.03e-17;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,4.86e-20,21;UBERON:0002104,4.86e-20,21;UBERON:0000966,7.67e-18,6;UBERON:0005388,7.67e-18,6;UBERON:0001802,7.67e-18,6;UBERON:0000020,1.03e-17,24;UBERON:0001032,1.03e-17,24;UBERON:0004456,1.03e-17,24 | |||
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|short_description=p2@BEST2 | |short_description=p2@BEST2 | ||
}} | }} |
Latest revision as of 20:24, 15 September 2015
Short description: | p2@BEST2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BEST2_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | 0bp_to_ENST00000549706_5end |
EntrezGene: | BEST2 |
HGNC: | 17107 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 4.86e-20 | 21 |
visual system | 4.86e-20 | 21 |
retina | 7.67e-18 | 6 |
photoreceptor array | 7.67e-18 | 6 |
posterior segment of eyeball | 7.67e-18 | 6 |
sense organ | 1.03e-17 | 24 |
sensory system | 1.03e-17 | 24 |
entire sense organ system | 1.03e-17 | 24 |