FFCP PHASE1:Hg19::chr6:144164455..144164564,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:144164455..144164564,+ to FFCP PHASE1:Hg19::chr6:144164455..144164564,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84946 | |EntrezGene=84946 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21173 | |HGNC=21173 | ||
|TSSclassifier=strong | |||
|UniProt=Q96GA3 | |UniProt=Q96GA3 | ||
|association_with_transcript=0bp_to_ENST00000367576,NM_032860,uc003qjs.2_5end | |||
|cluster_id=chr6:144164455..144164564,+ | |||
|coexpression_cluster_id=C4143 | |||
|description=CAGE_peak_1_at_LTV1_5end | |||
|id=chr6:144164455..144164564,+ | |||
|ontology_enrichment_celltype=CL:0000838!7.13e-09!52;CL:0000542!1.81e-08!53;CL:0000051!1.81e-08!53;CL:0000945!1.68e-07!24;CL:0000826!1.68e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.48e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,7.13e-09,52;CL:0000542,1.81e-08,53;CL:0000051,1.81e-08,53;CL:0000945,1.68e-07,24;CL:0000826,1.68e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.48e-33!235;DOID:14566!4.59e-33!239;DOID:2531!4.69e-19!51;DOID:0060083!4.69e-19!51;DOID:8692!2.11e-17!31;DOID:1240!2.86e-17!39;DOID:0050687!8.49e-16!143;DOID:0050686!2.21e-14!137;DOID:305!4.38e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:8692;6.85e-17;31!DOID:1240;5.81e-14;39!DOID:2531;6.86e-12;51!DOID:0060083;6.86e-12;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.48e-33,235;DOID:14566,4.59e-33,239;DOID:2531,4.69e-19,51;DOID:0060083,4.69e-19,51;DOID:8692,2.11e-17,31;DOID:1240,2.86e-17,39;DOID:0050687,8.49e-16,143;DOID:0050686,2.21e-14,137;DOID:305,4.38e-09,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@LTV1 | |||
}} | }} |
Latest revision as of 20:52, 15 September 2015
Short description: | p1@LTV1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LTV1_5end |
Coexpression cluster: | C4143_Mast_acute_hepatoblastoma_embryonic_rhabdomyosarcoma_testicular_cord |
Association with transcript: | 0bp_to_ENST00000367576, NM_032860, uc003qjs.2_5end |
EntrezGene: | LTV1 |
HGNC: | 21173 |
UniProt: | Q96GA3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 7.13e-09 | 52 |
lymphocyte | 1.81e-08 | 53 |
common lymphoid progenitor | 1.81e-08 | 53 |
lymphocyte of B lineage | 1.68e-07 | 24 |
pro-B cell | 1.68e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.48e-33 | 235 |
disease of cellular proliferation | 4.59e-33 | 239 |
hematologic cancer | 4.69e-19 | 51 |
immune system cancer | 4.69e-19 | 51 |
myeloid leukemia | 2.11e-17 | 31 |
leukemia | 2.86e-17 | 39 |
cell type cancer | 8.49e-16 | 143 |
organ system cancer | 2.21e-14 | 137 |
carcinoma | 4.38e-09 | 106 |