FFCP PHASE1:Hg19::chr8:119964115..119964132,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4982 | |EntrezGene=4982 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11909 | |HGNC=11909 | ||
|TSSclassifier=strong | |||
|UniProt=E5RFV7 | |UniProt=E5RFV7 | ||
|association_with_transcript=0bp_to_ENST00000517352_5end | |association_with_transcript=0bp_to_ENST00000517352_5end | ||
|cluster_id=chr8:119964115..119964132,- | |||
|coexpression_cluster_id=C4720 | |||
|description=CAGE_peak_1_at_TNFRSF11B_5end | |description=CAGE_peak_1_at_TNFRSF11B_5end | ||
|id=chr8:119964115..119964132,- | |id=chr8:119964115..119964132,- | ||
|ontology_enrichment_celltype=CL:0000055!9.61e-29!180;CL:0000057!8.63e-23!75;CL:0000359!7.47e-13!32;CL:0000192!8.35e-13!42;CL:0000514!8.35e-13!42;CL:0000680!1.96e-09!57;CL:0000056!1.96e-09!57;CL:0000355!1.96e-09!57;CL:0000187!7.42e-09!54;CL:0000183!8.68e-09!59;CL:0002620!1.80e-08!23;CL:0000393!9.36e-08!60;CL:0000211!9.36e-08!60;CL:0000222!2.29e-07!119 | |ontology_enrichment_celltype=CL:0000055!9.61e-29!180;CL:0000057!8.63e-23!75;CL:0000359!7.47e-13!32;CL:0000192!8.35e-13!42;CL:0000514!8.35e-13!42;CL:0000680!1.96e-09!57;CL:0000056!1.96e-09!57;CL:0000355!1.96e-09!57;CL:0000187!7.42e-09!54;CL:0000183!8.68e-09!59;CL:0002620!1.80e-08!23;CL:0000393!9.36e-08!60;CL:0000211!9.36e-08!60;CL:0000222!2.29e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000359;6.06e-13;32!CL:0000192;1.90e-09;43!CL:0000057;2.35e-09;73!CL:0002620;6.93e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.96e-24,76;CL:0000359,2.25e-13,32;CL:0000192,1.35e-12,43;CL:0000514,1.35e-12,43;CL:0000680,2.14e-08,58;CL:0000056,2.14e-08,58;CL:0000355,2.14e-08,58;CL:0000187,4.34e-08,55;CL:0002620,5.60e-08,23;CL:0000222,9.12e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;1.90e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;3.95e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.16e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0005256!2.17e-15!143;UBERON:0000475!6.57e-14!365;UBERON:0002100!4.43e-13!216;UBERON:0000914!4.39e-12!83;UBERON:0002329!4.39e-12!83;UBERON:0003077!4.39e-12!83;UBERON:0003059!4.39e-12!83;UBERON:0007282!4.39e-12!83;UBERON:0009618!4.39e-12!83;UBERON:0007285!4.39e-12!83;UBERON:0003914!1.36e-11!118;UBERON:0000477!1.61e-11!286;UBERON:0004290!3.08e-10!70;UBERON:0002049!4.95e-10!79;UBERON:0007798!4.95e-10!79;UBERON:0001637!1.32e-09!42;UBERON:0003509!1.32e-09!42;UBERON:0004572!1.32e-09!42;UBERON:0004111!2.47e-09!241;UBERON:0000483!2.49e-09!309;UBERON:0004872!3.51e-09!84;UBERON:0000481!3.83e-09!347;UBERON:0001134!3.94e-09!61;UBERON:0002036!3.94e-09!61;UBERON:0003082!3.94e-09!61;UBERON:0002385!4.62e-09!63;UBERON:0001015!4.62e-09!63;UBERON:0000383!4.62e-09!63;UBERON:0004573!5.48e-09!33;UBERON:0004571!5.48e-09!33;UBERON:0000119!7.43e-09!312;UBERON:0000486!1.09e-08!82;UBERON:0000055!1.17e-08!69;UBERON:0000490!6.46e-08!138;UBERON:0001981!6.49e-08!60;UBERON:0007500!6.49e-08!60;UBERON:0004537!6.49e-08!60;UBERON:0006965!6.49e-08!60;UBERON:0003102!7.55e-08!95;UBERON:0000025!3.23e-07!194;UBERON:0003104!3.58e-07!238;UBERON:0009142!3.58e-07!238;UBERON:0000468!3.77e-07!659;UBERON:0001009!5.73e-07!113;UBERON:0002097!7.37e-07!40 | |ontology_enrichment_uberon=UBERON:0005256!2.17e-15!143;UBERON:0000475!6.57e-14!365;UBERON:0002100!4.43e-13!216;UBERON:0000914!4.39e-12!83;UBERON:0002329!4.39e-12!83;UBERON:0003077!4.39e-12!83;UBERON:0003059!4.39e-12!83;UBERON:0007282!4.39e-12!83;UBERON:0009618!4.39e-12!83;UBERON:0007285!4.39e-12!83;UBERON:0003914!1.36e-11!118;UBERON:0000477!1.61e-11!286;UBERON:0004290!3.08e-10!70;UBERON:0002049!4.95e-10!79;UBERON:0007798!4.95e-10!79;UBERON:0001637!1.32e-09!42;UBERON:0003509!1.32e-09!42;UBERON:0004572!1.32e-09!42;UBERON:0004111!2.47e-09!241;UBERON:0000483!2.49e-09!309;UBERON:0004872!3.51e-09!84;UBERON:0000481!3.83e-09!347;UBERON:0001134!3.94e-09!61;UBERON:0002036!3.94e-09!61;UBERON:0003082!3.94e-09!61;UBERON:0002385!4.62e-09!63;UBERON:0001015!4.62e-09!63;UBERON:0000383!4.62e-09!63;UBERON:0004573!5.48e-09!33;UBERON:0004571!5.48e-09!33;UBERON:0000119!7.43e-09!312;UBERON:0000486!1.09e-08!82;UBERON:0000055!1.17e-08!69;UBERON:0000490!6.46e-08!138;UBERON:0001981!6.49e-08!60;UBERON:0007500!6.49e-08!60;UBERON:0004537!6.49e-08!60;UBERON:0006965!6.49e-08!60;UBERON:0003102!7.55e-08!95;UBERON:0000025!3.23e-07!194;UBERON:0003104!3.58e-07!238;UBERON:0009142!3.58e-07!238;UBERON:0000468!3.77e-07!659;UBERON:0001009!5.73e-07!113;UBERON:0002097!7.37e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.75e-09;33!UBERON:0004571;4.75e-09;33!UBERON:0001637;1.99e-07;42!UBERON:0003509;1.99e-07;42!UBERON:0004572;1.99e-07;42 | |||
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| ||
|short_description=p1@TNFRSF11B | |short_description=p1@TNFRSF11B | ||
}} | }} |
Latest revision as of 20:56, 15 September 2015
Short description: | p1@TNFRSF11B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TNFRSF11B_5end |
Coexpression cluster: | C4720_hepatic_Ewing_Fibroblast_Olfactory_pleomorphic_Synoviocyte_Hair |
Association with transcript: | 0bp_to_ENST00000517352_5end |
EntrezGene: | TNFRSF11B |
HGNC: | 11909 |
UniProt: | E5RFV7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.96e-24 | 76 |
vascular associated smooth muscle cell | 2.25e-13 | 32 |
smooth muscle cell | 1.35e-12 | 43 |
smooth muscle myoblast | 1.35e-12 | 43 |
muscle precursor cell | 2.14e-08 | 58 |
myoblast | 2.14e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.14e-08 | 58 |
muscle cell | 4.34e-08 | 55 |
skin fibroblast | 5.60e-08 | 23 |
mesodermal cell | 9.12e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.16e-07 | 14 |