FFCP PHASE1:Hg19::chr19:12912688..12912699,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7001 | |EntrezGene=7001 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9353 | |HGNC=9353 | ||
|TSSclassifier=strong | |||
|UniProt=A8K0C0,P32119 | |UniProt=A8K0C0,P32119 | ||
|association_with_transcript=0bp_to_ENST00000435703,NM_005809,NM_181738,uc002mvd.2,uc002mve.1_5end | |association_with_transcript=0bp_to_ENST00000435703,NM_005809,NM_181738,uc002mvd.2,uc002mve.1_5end | ||
|cluster_id=chr19:12912688..12912699,- | |||
|coexpression_cluster_id=C3751 | |||
|description=CAGE_peak_4_at_PRDX2_5end | |description=CAGE_peak_4_at_PRDX2_5end | ||
|id=chr19:12912688..12912699,- | |id=chr19:12912688..12912699,- | ||
|ontology_enrichment_celltype=CL:0000393!3.70e-14!60;CL:0000211!3.70e-14!60;CL:0000055!6.13e-14!180;CL:0000183!1.08e-13!59;CL:0002321!1.61e-13!248;CL:0000222!2.33e-13!119;CL:0000220!8.43e-13!246;CL:0000187!3.09e-11!54;CL:0000680!2.28e-10!57;CL:0000056!2.28e-10!57;CL:0000355!2.28e-10!57;CL:0000192!8.58e-10!42;CL:0000514!8.58e-10!42;CL:0000359!1.85e-08!32;CL:0000133!3.66e-08!59;CL:0000221!6.32e-08!71;CL:0002078!8.53e-07!44 | |ontology_enrichment_celltype=CL:0000393!3.70e-14!60;CL:0000211!3.70e-14!60;CL:0000055!6.13e-14!180;CL:0000183!1.08e-13!59;CL:0002321!1.61e-13!248;CL:0000222!2.33e-13!119;CL:0000220!8.43e-13!246;CL:0000187!3.09e-11!54;CL:0000680!2.28e-10!57;CL:0000056!2.28e-10!57;CL:0000355!2.28e-10!57;CL:0000192!8.58e-10!42;CL:0000514!8.58e-10!42;CL:0000359!1.85e-08!32;CL:0000133!3.66e-08!59;CL:0000221!6.32e-08!71;CL:0002078!8.53e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.69e-08;32!CL:0000393;2.09e-07;61!CL:0000211;2.09e-07;61!CL:1000449;4.68e-07;15!CL:1000497;5.69e-07;17!CL:0002518;5.69e-07;17!CL:0000192;7.20e-07;43!CL:0000187;9.96e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.23e-13,250;CL:0000393,1.31e-13,61;CL:0000211,1.31e-13,61;CL:0000222,2.36e-13,121;CL:0000187,9.61e-11,55;CL:0000680,6.40e-10,58;CL:0000056,6.40e-10,58;CL:0000355,6.40e-10,58;CL:0000192,2.85e-09,43;CL:0000514,2.85e-09,43;CL:0000359,1.84e-08,32;CL:0000133,3.30e-08,59;CL:0000221,3.81e-08,72;CL:0002078,4.15e-07,45;CL:1000449,4.66e-07,15;CL:1000497,6.06e-07,17;CL:0002518,6.06e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000514;7.20e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!4.84e-20!312;UBERON:0000483!8.96e-20!309;UBERON:0000477!7.45e-15!286;UBERON:0002049!2.00e-14!79;UBERON:0007798!2.00e-14!79;UBERON:0000025!1.77e-13!194;UBERON:0000481!5.45e-13!347;UBERON:0004872!5.76e-13!84;UBERON:0004111!3.61e-12!241;UBERON:0003914!5.34e-12!118;UBERON:0000475!5.60e-12!365;UBERON:0000055!6.50e-12!69;UBERON:0004290!7.62e-12!70;UBERON:0000914!1.26e-11!83;UBERON:0002329!1.26e-11!83;UBERON:0003077!1.26e-11!83;UBERON:0003059!1.26e-11!83;UBERON:0007282!1.26e-11!83;UBERON:0009618!1.26e-11!83;UBERON:0007285!1.26e-11!83;UBERON:0001009!1.41e-11!113;UBERON:0000486!1.43e-11!82;UBERON:0001134!3.51e-11!61;UBERON:0002036!3.51e-11!61;UBERON:0003082!3.51e-11!61;UBERON:0000064!8.95e-11!219;UBERON:0004535!1.18e-10!110;UBERON:0001981!1.85e-10!60;UBERON:0007500!1.85e-10!60;UBERON:0004537!1.85e-10!60;UBERON:0006965!1.85e-10!60;UBERON:0002385!2.82e-10!63;UBERON:0001015!2.82e-10!63;UBERON:0000383!2.82e-10!63;UBERON:0005256!2.93e-10!143;UBERON:0001637!7.33e-09!42;UBERON:0003509!7.33e-09!42;UBERON:0004572!7.33e-09!42;UBERON:0003103!2.89e-08!69;UBERON:0000490!9.18e-08!138;UBERON:0000468!9.77e-08!659;UBERON:0005743!1.07e-07!86;UBERON:0004121!1.16e-07!169;UBERON:0000073!1.21e-07!94;UBERON:0001016!1.21e-07!94;UBERON:0000924!1.71e-07!173;UBERON:0006601!1.71e-07!173;UBERON:0003075!2.58e-07!86;UBERON:0007284!2.58e-07!86;UBERON:0002100!4.49e-07!216;UBERON:0004573!5.01e-07!33;UBERON:0004571!5.01e-07!33;UBERON:0002346!5.23e-07!90;UBERON:0003056!8.63e-07!61 | |ontology_enrichment_uberon=UBERON:0000119!4.84e-20!312;UBERON:0000483!8.96e-20!309;UBERON:0000477!7.45e-15!286;UBERON:0002049!2.00e-14!79;UBERON:0007798!2.00e-14!79;UBERON:0000025!1.77e-13!194;UBERON:0000481!5.45e-13!347;UBERON:0004872!5.76e-13!84;UBERON:0004111!3.61e-12!241;UBERON:0003914!5.34e-12!118;UBERON:0000475!5.60e-12!365;UBERON:0000055!6.50e-12!69;UBERON:0004290!7.62e-12!70;UBERON:0000914!1.26e-11!83;UBERON:0002329!1.26e-11!83;UBERON:0003077!1.26e-11!83;UBERON:0003059!1.26e-11!83;UBERON:0007282!1.26e-11!83;UBERON:0009618!1.26e-11!83;UBERON:0007285!1.26e-11!83;UBERON:0001009!1.41e-11!113;UBERON:0000486!1.43e-11!82;UBERON:0001134!3.51e-11!61;UBERON:0002036!3.51e-11!61;UBERON:0003082!3.51e-11!61;UBERON:0000064!8.95e-11!219;UBERON:0004535!1.18e-10!110;UBERON:0001981!1.85e-10!60;UBERON:0007500!1.85e-10!60;UBERON:0004537!1.85e-10!60;UBERON:0006965!1.85e-10!60;UBERON:0002385!2.82e-10!63;UBERON:0001015!2.82e-10!63;UBERON:0000383!2.82e-10!63;UBERON:0005256!2.93e-10!143;UBERON:0001637!7.33e-09!42;UBERON:0003509!7.33e-09!42;UBERON:0004572!7.33e-09!42;UBERON:0003103!2.89e-08!69;UBERON:0000490!9.18e-08!138;UBERON:0000468!9.77e-08!659;UBERON:0005743!1.07e-07!86;UBERON:0004121!1.16e-07!169;UBERON:0000073!1.21e-07!94;UBERON:0001016!1.21e-07!94;UBERON:0000924!1.71e-07!173;UBERON:0006601!1.71e-07!173;UBERON:0003075!2.58e-07!86;UBERON:0007284!2.58e-07!86;UBERON:0002100!4.49e-07!216;UBERON:0004573!5.01e-07!33;UBERON:0004571!5.01e-07!33;UBERON:0002346!5.23e-07!90;UBERON:0003056!8.63e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0003914;2.26e-07;74!UBERON:0006555;4.68e-07;15!UBERON:0004819;4.68e-07;15!UBERON:0001285;4.68e-07;15!UBERON:0007684;4.68e-07;15!UBERON:0000055;9.54e-07;65 | |||
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| ||
|short_description=p4@PRDX2 | |short_description=p4@PRDX2 | ||
}} | }} |
Latest revision as of 21:20, 15 September 2015
Short description: | p4@PRDX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PRDX2_5end |
Coexpression cluster: | C3751_Mesenchymal_Renal_Reticulocytes_Alveolar_neuroblastoma_nonsmall_Neurons |
Association with transcript: | 0bp_to_ENST00000435703, NM_005809, NM_181738, uc002mvd.2, uc002mve.1_5end |
EntrezGene: | PRDX2 |
HGNC: | 9353 |
UniProt: | A8K0C0P32119 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.23e-13 | 250 |
electrically responsive cell | 1.31e-13 | 61 |
electrically active cell | 1.31e-13 | 61 |
mesodermal cell | 2.36e-13 | 121 |
muscle cell | 9.61e-11 | 55 |
muscle precursor cell | 6.40e-10 | 58 |
myoblast | 6.40e-10 | 58 |
multi-potent skeletal muscle stem cell | 6.40e-10 | 58 |
smooth muscle cell | 2.85e-09 | 43 |
smooth muscle myoblast | 2.85e-09 | 43 |
vascular associated smooth muscle cell | 1.84e-08 | 32 |
neurectodermal cell | 3.30e-08 | 59 |
ectodermal cell | 3.81e-08 | 72 |
meso-epithelial cell | 4.15e-07 | 45 |
epithelial cell of nephron | 4.66e-07 | 15 |
kidney cell | 6.06e-07 | 17 |
kidney epithelial cell | 6.06e-07 | 17 |