FFCP PHASE1:Hg19::chr12:102874382..102874394,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:102874382..102874394,- to FFCP PHASE1:Hg19::chr12:102874382..102874394,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3479 | |EntrezGene=3479 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5464 | |HGNC=5464 | ||
|TSSclassifier=strong | |||
|UniProt=E9PD02,P05019,Q59GC5,Q5U743,Q13429 | |UniProt=E9PD02,P05019,Q59GC5,Q5U743,Q13429 | ||
|association_with_transcript=-4bp_to_ENST00000456098,NM_000618,NM_001111283,NM_001111285,uc001tjm.2,uc001tjo.2,uc001tjp.3_5end | |||
|cluster_id=chr12:102874382..102874394,- | |||
|coexpression_cluster_id=C888 | |||
|description=CAGE_peak_7_at_IGF1_5end | |||
|id=chr12:102874382..102874394,- | |||
|ontology_enrichment_celltype=CL:0000136!7.72e-12!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.42e-25;13!CL:0002619;8.46e-10;3!CL:0000135;7.65e-09;3!CL:0000388;7.65e-09;3!CL:0002615;1.17e-08;3!CL:0000235;1.81e-07;6!CL:0002617;2.77e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,6.88e-22,15;CL:0002619,8.73e-10,3;CL:0000135,1.14e-08,3;CL:0000388,1.14e-08,3;CL:0002615,1.20e-08,3;CL:0000235,2.31e-07,6;CL:0002617,2.54e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;4.67e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.16e-34!115;UBERON:0004457!1.56e-10!12;UBERON:0000042!1.56e-10!12;UBERON:0003080!1.72e-08!42;UBERON:0001893!1.87e-08!34;UBERON:0001869!2.19e-08!32;UBERON:0001049!4.69e-08!57;UBERON:0005068!4.69e-08!57;UBERON:0006241!4.69e-08!57;UBERON:0007135!4.69e-08!57;UBERON:0002791!6.46e-08!33;UBERON:0002780!8.79e-08!41;UBERON:0001890!8.79e-08!41;UBERON:0006240!8.79e-08!41;UBERON:0003688!9.67e-08!6;UBERON:0002358!9.67e-08!6;UBERON:0003684!9.67e-08!6;UBERON:0001178!9.67e-08!6;UBERON:0000956!1.44e-07!25;UBERON:0000203!1.44e-07!25;UBERON:0002619!4.88e-07!22;UBERON:0002020!9.35e-07!34;UBERON:0003528!9.35e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;7.26e-11;6!UBERON:0002358;7.26e-11;6!UBERON:0003684;7.26e-11;6!UBERON:0001178;7.26e-11;6!UBERON:0006947;1.02e-09;3!UBERON:0004054;1.02e-09;3!UBERON:0003135;5.42e-09;11!UBERON:0007846;7.65e-09;3!UBERON:0000043;7.65e-09;3!UBERON:0007845;7.65e-09;3!UBERON:0005904;2.28e-07;4!UBERON:0004457;3.85e-07;9!UBERON:0000042;3.85e-07;9!UBERON:0003127;7.35e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.36e-11,114;UBERON:0003688,7.94e-11,6;UBERON:0002358,7.94e-11,6;UBERON:0003684,7.94e-11,6;UBERON:0001178,7.94e-11,6;UBERON:0006947,9.26e-10,3;UBERON:0004054,9.26e-10,3;UBERON:0003135,5.24e-09,11;UBERON:0007846,1.14e-08,3;UBERON:0000043,1.14e-08,3;UBERON:0007845,1.14e-08,3;UBERON:0005904,2.11e-07,4;UBERON:0003127,7.15e-07,2 | |||
|phase1_expression=5.81370813665781,8.77812147953031,3.38290569830331,1.0007329835313,1.78784437770915,1.74467704820074,5.06599756336621,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0,0.0787107813136792,0,0,1.08371286321253,0,0,0,0,0,0,0,0,0,7.83704159839735,3.2389366601898,5.15151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63239701580021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579386075843295,0.795285947051099,0.486634870302636,0,0,0,1.11332214173056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,12.6755034821831,3.9313088667105,4.13552934676983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23108503043699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.099972991182057,1.2162378064119,4.52031382288914,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670065061337395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0.496215615637554,0.460385919864187,0.280660094433074,0.640695746278505,1.53512174720011,1.12597744800525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.32772248920434,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.267096106940212,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0.987884678879706,0,0,0,0,0,4.23647103495506,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.76493350141038,0,0,0,0,1.48482340416319,0,0.994147647766298,0.281338832821026,0.445234820091624,0,0,0.796991953004279,2.48655523978033,0,0,0,0,0,0,0,3.15658898038188,0,0,0,0.185536196323703,0,0,0,2.89999830173917,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,5.54041861227339,0.683652335082007,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.530745387020035,1.83309043480088,0,0,0,0.134802265961354,1.60515529459758,0.702793337176017,0,0,0,4.3404284313433,2.41981432097328,0.61214552326098,11.9422635497842,0,0,0,0,0,0,0,0,0,0,0,4.36816670605075,0,0,0,0,1.45483524732629,0,2.48578814858586,0,0,0.379864775735272,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,1.67569440763353,0.229160424011684,1.43574604915363,0.199679000498991,0.429226048136571,0.223171457441873,0.335917362433631,0.720599767084807,0,0,0,0,0,0.0846733320657845,0.795229689809303,0.136203406111576,0,0,0,0,0,0.485996453264197,0,0.315222829196793,0.367182116944987,0,0,0,4.2881719582402,0,0,0,0,0,0,0,0,0.113312091520126,7.62071615126029,0,0,0,0,0,0.747511887973863,0.471612915298998,0.828478110694391,1.48849806543585,0,0,0,8.16026705054211,11.7824250190669,14.7045876846462,10.8197968134235,0,0,0.244052529803926,0,0,0.110929051536852,0.248385611765534,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443565449968902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20550485762571,0,0.184105950251841,0,6.8428498603627,0,0,0,0,0.169732529954025,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0.321146125482298,0,0.319267718114302,0.41023272848151,0,0,0.484426936895553,0,0,0,0,0,0,0,0,0.902523940191087,0,0,0,0,0,0.270150338473579,0,0.206686796501184,0.380494861163441,0,0.548257766857182,6.45074531906083,0,0,0,0,0,0.227662191351298,0.443511850813194,0.460935950223117,0,0.339848664884159,0.197318320688547,0,0,3.68917536397416,0.157115589916002,0,0.913158720509496,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0.170426809518315,5.50403165248208,1.3746412112643,0,0,0,0,0,0,1.33461648913121,0,2.91426595835484,0,0,0,0,0,0,0.308696632431779,0.874238242015829,0,0.735444965261716,0,0,0.594092800654172,1.2679671827502,0.169927114687817,0.657887425858975,0.193373663920732,0.499705779624645,0,0,0,0.730336388246517,0,0,0,0.203974470572744,0,0,1.11598505450025,5.0839319149456,1.29787968637137,0,0,0,0,0,0,0,2.42491834298366,1.33982065078089,0,0,1.70587185520785,2.3806443146374,0.387533459016037,0.124149428591716,0,4.00977097152439,2.42540626749863,2.39488422686657,7.87136592496146,0.134704106029175,3.01233262649241,4.65724499164419,0,0,0,0,0,2.32258743947446,20.3448089157869,1.33151354837103,1.61019034872821,0 | |phase1_expression=5.81370813665781,8.77812147953031,3.38290569830331,1.0007329835313,1.78784437770915,1.74467704820074,5.06599756336621,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0,0.0787107813136792,0,0,1.08371286321253,0,0,0,0,0,0,0,0,0,7.83704159839735,3.2389366601898,5.15151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63239701580021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579386075843295,0.795285947051099,0.486634870302636,0,0,0,1.11332214173056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,12.6755034821831,3.9313088667105,4.13552934676983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23108503043699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.099972991182057,1.2162378064119,4.52031382288914,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670065061337395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0.496215615637554,0.460385919864187,0.280660094433074,0.640695746278505,1.53512174720011,1.12597744800525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.32772248920434,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.267096106940212,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0.987884678879706,0,0,0,0,0,4.23647103495506,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.76493350141038,0,0,0,0,1.48482340416319,0,0.994147647766298,0.281338832821026,0.445234820091624,0,0,0.796991953004279,2.48655523978033,0,0,0,0,0,0,0,3.15658898038188,0,0,0,0.185536196323703,0,0,0,2.89999830173917,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,5.54041861227339,0.683652335082007,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.530745387020035,1.83309043480088,0,0,0,0.134802265961354,1.60515529459758,0.702793337176017,0,0,0,4.3404284313433,2.41981432097328,0.61214552326098,11.9422635497842,0,0,0,0,0,0,0,0,0,0,0,4.36816670605075,0,0,0,0,1.45483524732629,0,2.48578814858586,0,0,0.379864775735272,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,1.67569440763353,0.229160424011684,1.43574604915363,0.199679000498991,0.429226048136571,0.223171457441873,0.335917362433631,0.720599767084807,0,0,0,0,0,0.0846733320657845,0.795229689809303,0.136203406111576,0,0,0,0,0,0.485996453264197,0,0.315222829196793,0.367182116944987,0,0,0,4.2881719582402,0,0,0,0,0,0,0,0,0.113312091520126,7.62071615126029,0,0,0,0,0,0.747511887973863,0.471612915298998,0.828478110694391,1.48849806543585,0,0,0,8.16026705054211,11.7824250190669,14.7045876846462,10.8197968134235,0,0,0.244052529803926,0,0,0.110929051536852,0.248385611765534,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443565449968902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20550485762571,0,0.184105950251841,0,6.8428498603627,0,0,0,0,0.169732529954025,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0.321146125482298,0,0.319267718114302,0.41023272848151,0,0,0.484426936895553,0,0,0,0,0,0,0,0,0.902523940191087,0,0,0,0,0,0.270150338473579,0,0.206686796501184,0.380494861163441,0,0.548257766857182,6.45074531906083,0,0,0,0,0,0.227662191351298,0.443511850813194,0.460935950223117,0,0.339848664884159,0.197318320688547,0,0,3.68917536397416,0.157115589916002,0,0.913158720509496,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0.170426809518315,5.50403165248208,1.3746412112643,0,0,0,0,0,0,1.33461648913121,0,2.91426595835484,0,0,0,0,0,0,0.308696632431779,0.874238242015829,0,0.735444965261716,0,0,0.594092800654172,1.2679671827502,0.169927114687817,0.657887425858975,0.193373663920732,0.499705779624645,0,0,0,0.730336388246517,0,0,0,0.203974470572744,0,0,1.11598505450025,5.0839319149456,1.29787968637137,0,0,0,0,0,0,0,2.42491834298366,1.33982065078089,0,0,1.70587185520785,2.3806443146374,0.387533459016037,0.124149428591716,0,4.00977097152439,2.42540626749863,2.39488422686657,7.87136592496146,0.134704106029175,3.01233262649241,4.65724499164419,0,0,0,0,0,2.32258743947446,20.3448089157869,1.33151354837103,1.61019034872821,0 | ||
|short_description=p7@IGF1 | |||
}} | }} |
Latest revision as of 21:24, 15 September 2015
Short description: | p7@IGF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_IGF1_5end |
Coexpression cluster: | C888_uterus_dura_CD14_mature_epididymis_prostate_cervix |
Association with transcript: | -4bp_to_ENST00000456098, NM_000618, NM_001111283, NM_001111285, uc001tjm.2, uc001tjo.2, uc001tjp.3_5end |
EntrezGene: | IGF1 |
HGNC: | 5464 |
UniProt: | E9PD02P05019Q59GC5Q5U743Q13429 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 6.88e-22 | 15 |
adult endothelial progenitor cell | 8.73e-10 | 3 |
fibrocyte | 1.14e-08 | 3 |
tendon cell | 1.14e-08 | 3 |
adipocyte of omentum tissue | 1.20e-08 | 3 |
macrophage | 2.31e-07 | 6 |
adipocyte of breast | 2.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.36e-11 | 114 |
omentum | 7.94e-11 | 6 |
peritoneum | 7.94e-11 | 6 |
abdominal cavity | 7.94e-11 | 6 |
visceral peritoneum | 7.94e-11 | 6 |
male genital duct | 9.26e-10 | 3 |
internal male genitalia | 9.26e-10 | 3 |
male reproductive organ | 5.24e-09 | 11 |
dense regular connective tissue | 1.14e-08 | 3 |
tendon | 1.14e-08 | 3 |
regular connective tissue | 1.14e-08 | 3 |
duct of male reproductive system | 2.11e-07 | 4 |
open tracheal system trachea | 7.15e-07 | 2 |