FFCP PHASE1:Hg19::chr20:34542216..34542278,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51282 | |EntrezGene=51282 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10566 | |HGNC=10566 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=149bp_to_uc002xeo.2_5end | |association_with_transcript=149bp_to_uc002xeo.2_5end | ||
|cluster_id=chr20:34542216..34542278,- | |||
|description=CAGE_peak_2_at_SCAND1_5end | |description=CAGE_peak_2_at_SCAND1_5end | ||
|id=chr20:34542216..34542278,- | |id=chr20:34542216..34542278,- | ||
|ontology_enrichment_celltype=CL:0000838!2.08e-07!52;CL:0000791!2.75e-07!18;CL:0000789!2.75e-07!18;CL:0002420!2.75e-07!18;CL:0002419!2.75e-07!18;CL:0000790!2.75e-07!18;CL:0000542!6.46e-07!53;CL:0000051!6.46e-07!53 | |ontology_enrichment_celltype=CL:0000838!2.08e-07!52;CL:0000791!2.75e-07!18;CL:0000789!2.75e-07!18;CL:0002420!2.75e-07!18;CL:0002419!2.75e-07!18;CL:0000790!2.75e-07!18;CL:0000542!6.46e-07!53;CL:0000051!6.46e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.44e-07;18!CL:0000789;2.44e-07;18!CL:0002419;2.44e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.08e-07,52;CL:0000791,2.75e-07,18;CL:0000789,2.75e-07,18;CL:0002420,2.75e-07,18;CL:0002419,2.75e-07,18;CL:0000790,2.75e-07,18;CL:0000542,6.46e-07,53;CL:0000051,6.46e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000790;2.44e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@SCAND1 | |short_description=p2@SCAND1 | ||
}} | }} |
Latest revision as of 21:27, 15 September 2015
Short description: | p2@SCAND1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SCAND1_5end |
Coexpression cluster: | NA |
Association with transcript: | 149bp_to_uc002xeo.2_5end |
EntrezGene: | SCAND1 |
HGNC: | 10566 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.08e-07 | 52 |
mature alpha-beta T cell | 2.75e-07 | 18 |
alpha-beta T cell | 2.75e-07 | 18 |
immature T cell | 2.75e-07 | 18 |
mature T cell | 2.75e-07 | 18 |
immature alpha-beta T cell | 2.75e-07 | 18 |
lymphocyte | 6.46e-07 | 53 |
common lymphoid progenitor | 6.46e-07 | 53 |