FFCP PHASE1:Hg19::chr19:12941510..12941515,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83546 | |EntrezGene=83546 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30310 | |HGNC=30310 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BSG5 | |UniProt=Q9BSG5 | ||
|association_with_transcript=-303bp_to_ENST00000458671,NM_001080997,uc002mvi.2_5end | |association_with_transcript=-303bp_to_ENST00000458671,NM_001080997,uc002mvi.2_5end | ||
|cluster_id=chr19:12941510..12941515,- | |||
|coexpression_cluster_id=C24 | |coexpression_cluster_id=C24 | ||
|description=CAGE_peak_4_at_RTBDN_5end | |description=CAGE_peak_4_at_RTBDN_5end | ||
|id=chr19:12941510..12941515,- | |id=chr19:12941510..12941515,- | ||
|ontology_enrichment_celltype=CL:0002535!7.20e-07!2 | |ontology_enrichment_celltype=CL:0002535!7.20e-07!2 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.83e-14;3 | |||
|ontology_enrichment_disease=DOID:305!2.72e-07!106 | |ontology_enrichment_disease=DOID:305!2.72e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003296!4.74e-26!4;UBERON:0010133!4.74e-26!4;UBERON:0001905!6.38e-24!2;UBERON:0002757!6.38e-24!2;UBERON:0010134!6.38e-24!2;UBERON:0002784!6.38e-24!2;UBERON:0005408!6.38e-24!2;UBERON:0001899!6.38e-24!2;UBERON:0001894!3.61e-15!7;UBERON:0006222!3.61e-15!7;UBERON:0001737!1.63e-11!9;UBERON:0002360!6.80e-07!2;UBERON:0000094!6.80e-07!2;UBERON:0007645!6.80e-07!2;UBERON:0006955!7.20e-07!2;UBERON:0004801!7.20e-07!2;UBERON:0000007!8.06e-07!2 | |ontology_enrichment_uberon=UBERON:0003296!4.74e-26!4;UBERON:0010133!4.74e-26!4;UBERON:0001905!6.38e-24!2;UBERON:0002757!6.38e-24!2;UBERON:0010134!6.38e-24!2;UBERON:0002784!6.38e-24!2;UBERON:0005408!6.38e-24!2;UBERON:0001899!6.38e-24!2;UBERON:0001894!3.61e-15!7;UBERON:0006222!3.61e-15!7;UBERON:0001737!1.63e-11!9;UBERON:0002360!6.80e-07!2;UBERON:0000094!6.80e-07!2;UBERON:0007645!6.80e-07!2;UBERON:0006955!7.20e-07!2;UBERON:0004801!7.20e-07!2;UBERON:0000007!8.06e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.05e-79;2!UBERON:0002757;1.05e-79;2!UBERON:0010134;1.05e-79;2!UBERON:0005408;1.05e-79;2!UBERON:0001899;1.05e-79;2!UBERON:0003296;1.48e-40;4!UBERON:0010133;1.48e-40;4!UBERON:0002784;1.48e-40;4!UBERON:0001894;1.02e-23;7!UBERON:0000966;3.22e-09;5!UBERON:0005388;3.22e-09;5!UBERON:0001802;3.22e-09;5!UBERON:0000970;6.17e-09;20!UBERON:0002104;1.48e-08;21!UBERON:0000020;6.75e-08;23!UBERON:0001032;1.31e-07;24!UBERON:0004456;1.31e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.05e-79,2;UBERON:0002757,1.05e-79,2;UBERON:0010134,1.05e-79,2;UBERON:0005408,1.05e-79,2;UBERON:0001899,1.05e-79,2;UBERON:0003296,1.48e-40,4;UBERON:0010133,1.48e-40,4;UBERON:0002784,1.48e-40,4;UBERON:0001894,1.02e-23,7;UBERON:0006222,1.02e-23,7;UBERON:0000970,1.48e-08,21;UBERON:0002104,1.48e-08,21;UBERON:0000966,6.78e-08,6;UBERON:0005388,6.78e-08,6;UBERON:0001802,6.78e-08,6;UBERON:0000020,1.31e-07,24;UBERON:0001032,1.31e-07,24;UBERON:0004456,1.31e-07,24 | |||
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|short_description=p4@RTBDN | |short_description=p4@RTBDN | ||
}} | }} |
Latest revision as of 21:30, 15 September 2015
Short description: | p4@RTBDN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RTBDN_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -303bp_to_ENST00000458671, NM_001080997, uc002mvi.2_5end |
EntrezGene: | RTBDN |
HGNC: | 30310 |
UniProt: | Q9BSG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.05e-79 | 2 |
regional part of epithalamus | 1.05e-79 | 2 |
secretory circumventricular organ | 1.05e-79 | 2 |
circumventricular organ | 1.05e-79 | 2 |
epithalamus | 1.05e-79 | 2 |
gland of diencephalon | 1.48e-40 | 4 |
neuroendocrine gland | 1.48e-40 | 4 |
regional part of diencephalon | 1.48e-40 | 4 |
diencephalon | 1.02e-23 | 7 |
future diencephalon | 1.02e-23 | 7 |
eye | 1.48e-08 | 21 |
visual system | 1.48e-08 | 21 |
retina | 6.78e-08 | 6 |
photoreceptor array | 6.78e-08 | 6 |
posterior segment of eyeball | 6.78e-08 | 6 |
sense organ | 1.31e-07 | 24 |
sensory system | 1.31e-07 | 24 |
entire sense organ system | 1.31e-07 | 24 |