FFCP PHASE1:Hg19::chr20:34542383..34542451,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51282 | |EntrezGene=51282 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10566 | |HGNC=10566 | ||
|TSSclassifier=strong | |||
|UniProt=P57086 | |UniProt=P57086 | ||
|association_with_transcript=0bp_to_uc002xen.1,uc002xeo.2_5end | |association_with_transcript=0bp_to_uc002xen.1,uc002xeo.2_5end | ||
|cluster_id=chr20:34542383..34542451,- | |||
|description=CAGE_peak_1_at_SCAND1_5end | |description=CAGE_peak_1_at_SCAND1_5end | ||
|id=chr20:34542383..34542451,- | |id=chr20:34542383..34542451,- | ||
|ontology_enrichment_celltype=CL:0000144!1.38e-21!625;CL:0002371!1.15e-19!591;CL:0000222!2.01e-18!119;CL:0000012!6.27e-15!682;CL:0000115!4.25e-14!35;CL:0000548!6.21e-14!679;CL:0000004!6.21e-14!679;CL:0000255!6.21e-14!679;CL:0000048!2.26e-13!430;CL:0000034!4.55e-13!444;CL:0000723!1.47e-12!436;CL:0000003!2.51e-12!722;CL:0002078!3.32e-12!44;CL:0000393!4.71e-11!60;CL:0000211!4.71e-11!60;CL:0002139!6.56e-11!24;CL:0000183!1.01e-10!59;CL:0000071!1.08e-10!18;CL:0002546!1.08e-10!18;CL:0000213!1.60e-10!57;CL:0000215!1.60e-10!57;CL:0000220!3.02e-10!246;CL:0002321!4.73e-10!248;CL:0000055!1.61e-09!180;CL:0000680!5.83e-09!57;CL:0000056!5.83e-09!57;CL:0000355!5.83e-09!57;CL:0000187!7.03e-09!54;CL:0000192!2.49e-08!42;CL:0000514!2.49e-08!42 | |ontology_enrichment_celltype=CL:0000144!1.38e-21!625;CL:0002371!1.15e-19!591;CL:0000222!2.01e-18!119;CL:0000012!6.27e-15!682;CL:0000115!4.25e-14!35;CL:0000548!6.21e-14!679;CL:0000004!6.21e-14!679;CL:0000255!6.21e-14!679;CL:0000048!2.26e-13!430;CL:0000034!4.55e-13!444;CL:0000723!1.47e-12!436;CL:0000003!2.51e-12!722;CL:0002078!3.32e-12!44;CL:0000393!4.71e-11!60;CL:0000211!4.71e-11!60;CL:0002139!6.56e-11!24;CL:0000183!1.01e-10!59;CL:0000071!1.08e-10!18;CL:0002546!1.08e-10!18;CL:0000213!1.60e-10!57;CL:0000215!1.60e-10!57;CL:0000220!3.02e-10!246;CL:0002321!4.73e-10!248;CL:0000055!1.61e-09!180;CL:0000680!5.83e-09!57;CL:0000056!5.83e-09!57;CL:0000355!5.83e-09!57;CL:0000187!7.03e-09!54;CL:0000192!2.49e-08!42;CL:0000514!2.49e-08!42 | ||
|ontology_enrichment_celltype_v019=CL:0000115;2.21e-12;36!CL:0002139;6.37e-11;24!CL:0000071;1.10e-10;18!CL:0002078;3.59e-09;45!CL:0000213;8.18e-07;58!CL:0000215;8.18e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.32e-19,121;CL:0000115,1.15e-14,36;CL:0000048,5.80e-14,427;CL:0000034,1.20e-13,441;CL:0000723,3.98e-13,433;CL:0002078,9.86e-13,45;CL:0000393,3.23e-11,61;CL:0000211,3.23e-11,61;CL:0000213,5.43e-11,58;CL:0000215,5.43e-11,58;CL:0002139,6.56e-11,24;CL:0000071,1.08e-10,18;CL:0002546,1.08e-10,18;CL:0002321,1.68e-10,250;CL:0000680,4.04e-09,58;CL:0000056,4.04e-09,58;CL:0000355,4.04e-09,58;CL:0000187,4.87e-09,55;CL:0000192,1.73e-08,43;CL:0000514,1.73e-08,43 | |||
|ontology_enrichment_development_v019=CL:0002546;1.10e-10;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.32e-15!216;UBERON:0002049!1.70e-14!79;UBERON:0007798!1.70e-14!79;UBERON:0000055!1.73e-12!69;UBERON:0003914!6.46e-12!118;UBERON:0001009!6.92e-12!113;UBERON:0004872!7.10e-12!84;UBERON:0004535!1.11e-11!110;UBERON:0001981!2.32e-11!60;UBERON:0007500!2.32e-11!60;UBERON:0004537!2.32e-11!60;UBERON:0006965!2.32e-11!60;UBERON:0002204!4.59e-11!167;UBERON:0000490!6.65e-11!138;UBERON:0004290!6.68e-11!70;UBERON:0001986!1.08e-10!18;UBERON:0004638!1.08e-10!18;UBERON:0004852!1.08e-10!18;UBERON:0001637!3.53e-10!42;UBERON:0003509!3.53e-10!42;UBERON:0004572!3.53e-10!42;UBERON:0000914!5.11e-10!83;UBERON:0002329!5.11e-10!83;UBERON:0003077!5.11e-10!83;UBERON:0003059!5.11e-10!83;UBERON:0007282!5.11e-10!83;UBERON:0009618!5.11e-10!83;UBERON:0007285!5.11e-10!83;UBERON:0006914!2.82e-09!25;UBERON:0000486!3.81e-09!82;UBERON:0000487!5.85e-09!22;UBERON:0001134!1.35e-08!61;UBERON:0002036!1.35e-08!61;UBERON:0003082!1.35e-08!61;UBERON:0005256!4.06e-08!143;UBERON:0002385!8.25e-08!63;UBERON:0001015!8.25e-08!63;UBERON:0000383!8.25e-08!63;UBERON:0000926!1.00e-07!448;UBERON:0004120!1.00e-07!448;UBERON:0006603!1.00e-07!448 | |ontology_enrichment_uberon=UBERON:0003081!1.32e-15!216;UBERON:0002049!1.70e-14!79;UBERON:0007798!1.70e-14!79;UBERON:0000055!1.73e-12!69;UBERON:0003914!6.46e-12!118;UBERON:0001009!6.92e-12!113;UBERON:0004872!7.10e-12!84;UBERON:0004535!1.11e-11!110;UBERON:0001981!2.32e-11!60;UBERON:0007500!2.32e-11!60;UBERON:0004537!2.32e-11!60;UBERON:0006965!2.32e-11!60;UBERON:0002204!4.59e-11!167;UBERON:0000490!6.65e-11!138;UBERON:0004290!6.68e-11!70;UBERON:0001986!1.08e-10!18;UBERON:0004638!1.08e-10!18;UBERON:0004852!1.08e-10!18;UBERON:0001637!3.53e-10!42;UBERON:0003509!3.53e-10!42;UBERON:0004572!3.53e-10!42;UBERON:0000914!5.11e-10!83;UBERON:0002329!5.11e-10!83;UBERON:0003077!5.11e-10!83;UBERON:0003059!5.11e-10!83;UBERON:0007282!5.11e-10!83;UBERON:0009618!5.11e-10!83;UBERON:0007285!5.11e-10!83;UBERON:0006914!2.82e-09!25;UBERON:0000486!3.81e-09!82;UBERON:0000487!5.85e-09!22;UBERON:0001134!1.35e-08!61;UBERON:0002036!1.35e-08!61;UBERON:0003082!1.35e-08!61;UBERON:0005256!4.06e-08!143;UBERON:0002385!8.25e-08!63;UBERON:0001015!8.25e-08!63;UBERON:0000383!8.25e-08!63;UBERON:0000926!1.00e-07!448;UBERON:0004120!1.00e-07!448;UBERON:0006603!1.00e-07!448 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.10e-10;18!UBERON:0001986;1.10e-10;18!UBERON:0004852;1.10e-10;18!UBERON:0006914;2.82e-09;25!UBERON:0000487;5.98e-09;22!UBERON:0001637;9.79e-08;42!UBERON:0003509;9.79e-08;42!UBERON:0004572;9.79e-08;42!UBERON:0007500;1.69e-07;56!UBERON:0001981;1.69e-07;56!UBERON:0004537;1.69e-07;56!UBERON:0000490;2.80e-07;33!UBERON:0003914;6.11e-07;74!UBERON:0002049;7.49e-07;75!UBERON:0007798;7.49e-07;75!UBERON:0000055;8.62e-07;65 | |||
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| ||
|short_description=p1@SCAND1 | |short_description=p1@SCAND1 | ||
}} | }} |
Latest revision as of 21:30, 15 September 2015
Short description: | p1@SCAND1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SCAND1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc002xen.1, uc002xeo.2_5end |
EntrezGene: | SCAND1 |
HGNC: | 10566 |
UniProt: | P57086 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.32e-19 | 121 |
endothelial cell | 1.15e-14 | 36 |
multi fate stem cell | 5.80e-14 | 427 |
stem cell | 1.20e-13 | 441 |
somatic stem cell | 3.98e-13 | 433 |
meso-epithelial cell | 9.86e-13 | 45 |
electrically responsive cell | 3.23e-11 | 61 |
electrically active cell | 3.23e-11 | 61 |
lining cell | 5.43e-11 | 58 |
barrier cell | 5.43e-11 | 58 |
endothelial cell of vascular tree | 6.56e-11 | 24 |
blood vessel endothelial cell | 1.08e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.08e-10 | 18 |
embryonic cell | 1.68e-10 | 250 |
muscle precursor cell | 4.04e-09 | 58 |
myoblast | 4.04e-09 | 58 |
multi-potent skeletal muscle stem cell | 4.04e-09 | 58 |
muscle cell | 4.87e-09 | 55 |
smooth muscle cell | 1.73e-08 | 43 |
smooth muscle myoblast | 1.73e-08 | 43 |