FFCP PHASE1:Hg19::chr2:233385266..233385306,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=646960 | |EntrezGene=646960 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=39433 | |HGNC=39433 | ||
|TSSclassifier=strong | |||
|UniProt=P0CW18 | |UniProt=P0CW18 | ||
|association_with_transcript=93bp_to_NM_001195129_5end | |association_with_transcript=93bp_to_NM_001195129_5end | ||
|cluster_id=chr2:233385266..233385306,+ | |||
|coexpression_cluster_id=C541 | |coexpression_cluster_id=C541 | ||
|description=CAGE_peak_2_at_PRSS56_5end | |description=CAGE_peak_2_at_PRSS56_5end | ||
|id=chr2:233385266..233385306,+ | |id=chr2:233385266..233385306,+ | ||
|ontology_enrichment_celltype=CL:1000415!2.73e-14!2;CL:0000066!5.12e-08!254 | |ontology_enrichment_celltype=CL:1000415!2.73e-14!2;CL:0000066!5.12e-08!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.91e-08,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.03e-47;29 | |||
|ontology_enrichment_disease=DOID:305!9.73e-16!106;DOID:0050687!6.53e-14!143;DOID:162!3.85e-10!235;DOID:14566!7.66e-10!239 | |ontology_enrichment_disease=DOID:305!9.73e-16!106;DOID:0050687!6.53e-14!143;DOID:162!3.85e-10!235;DOID:14566!7.66e-10!239 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.60e-18,106;DOID:0050687,1.83e-15,143;DOID:162,1.82e-10,235;DOID:14566,3.21e-10,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.10e-62!9;UBERON:0001557!5.46e-29!19;UBERON:0008947!1.27e-20!38;UBERON:0003258!1.27e-20!38;UBERON:0000072!1.08e-16!46;UBERON:0000065!3.17e-14!53;UBERON:0000063!1.88e-11!97;UBERON:0001004!5.96e-10!72;UBERON:0002110!7.81e-10!3;UBERON:0006242!7.81e-10!3;UBERON:0000077!3.68e-09!130;UBERON:0002294!3.75e-09!7;UBERON:0001173!3.75e-09!7;UBERON:0004912!3.75e-09!7;UBERON:0001041!3.76e-08!98;UBERON:0004913!4.72e-08!1;UBERON:0003703!4.72e-08!1;UBERON:0001174!4.72e-08!1;UBERON:0004914!4.72e-08!1;UBERON:0001048!1.81e-07!168;UBERON:0001007!3.69e-07!155;UBERON:0001555!3.69e-07!155;UBERON:0007026!3.69e-07!155 | |ontology_enrichment_uberon=UBERON:0001737!1.10e-62!9;UBERON:0001557!5.46e-29!19;UBERON:0008947!1.27e-20!38;UBERON:0003258!1.27e-20!38;UBERON:0000072!1.08e-16!46;UBERON:0000065!3.17e-14!53;UBERON:0000063!1.88e-11!97;UBERON:0001004!5.96e-10!72;UBERON:0002110!7.81e-10!3;UBERON:0006242!7.81e-10!3;UBERON:0000077!3.68e-09!130;UBERON:0002294!3.75e-09!7;UBERON:0001173!3.75e-09!7;UBERON:0004912!3.75e-09!7;UBERON:0001041!3.76e-08!98;UBERON:0004913!4.72e-08!1;UBERON:0003703!4.72e-08!1;UBERON:0001174!4.72e-08!1;UBERON:0004914!4.72e-08!1;UBERON:0001048!1.81e-07!168;UBERON:0001007!3.69e-07!155;UBERON:0001555!3.69e-07!155;UBERON:0007026!3.69e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.42e-125;9!UBERON:0001557;2.42e-125;9!UBERON:0000072;4.37e-34;37!UBERON:0000065;7.33e-30;44!UBERON:0001004;1.01e-13;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.26e-125,9;UBERON:0001557,3.96e-59,19;UBERON:0008947,3.10e-36,38;UBERON:0003258,3.10e-36,38;UBERON:0000072,3.91e-29,47;UBERON:0000065,3.04e-25,54;UBERON:0001004,3.61e-18,74;UBERON:0001041,2.63e-15,87;UBERON:0004921,6.55e-11,118;UBERON:0001007,1.09e-08,145;UBERON:0001555,1.09e-08,145;UBERON:0007026,1.09e-08,145;UBERON:0001048,7.90e-08,160;UBERON:0004119,8.98e-08,160;UBERON:0000925,8.98e-08,160;UBERON:0006595,8.98e-08,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,6.27026040211173,5.56329477257736,5.3022426574366,5.84558055481688,5.22910665821775,5.45722423955522,4.85392709376592,6.67152981426177,3.8474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.81164010073576,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,106.610844477339,0,0,0,0,0,0,0,0,0,9.9134001802281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0.195551382734803,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.3769170535501,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41994405973866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,6.27026040211173,5.56329477257736,5.3022426574366,5.84558055481688,5.22910665821775,5.45722423955522,4.85392709376592,6.67152981426177,3.8474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.81164010073576,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,106.610844477339,0,0,0,0,0,0,0,0,0,9.9134001802281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0.195551382734803,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.3769170535501,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41994405973866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@PRSS56 | |short_description=p2@PRSS56 | ||
}} | }} |
Latest revision as of 21:45, 15 September 2015
Short description: | p2@PRSS56 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRSS56_5end |
Coexpression cluster: | C541_bronchogenic_anaplastic_cervical_Hep2_small_testicular_large |
Association with transcript: | 93bp_to_NM_001195129_5end |
EntrezGene: | PRSS56 |
HGNC: | 39433 |
UniProt: | P0CW18 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.91e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.26e-125 | 9 |
upper respiratory tract | 3.96e-59 | 19 |
respiratory primordium | 3.10e-36 | 38 |
endoderm of foregut | 3.10e-36 | 38 |
segment of respiratory tract | 3.91e-29 | 47 |
respiratory tract | 3.04e-25 | 54 |
respiratory system | 3.61e-18 | 74 |
foregut | 2.63e-15 | 87 |
subdivision of digestive tract | 6.55e-11 | 118 |
digestive system | 1.09e-08 | 145 |
digestive tract | 1.09e-08 | 145 |
primitive gut | 1.09e-08 | 145 |
primordium | 7.90e-08 | 160 |
endoderm-derived structure | 8.98e-08 | 160 |
endoderm | 8.98e-08 | 160 |
presumptive endoderm | 8.98e-08 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.60e-18 | 106 |
cell type cancer | 1.83e-15 | 143 |
cancer | 1.82e-10 | 235 |
disease of cellular proliferation | 3.21e-10 | 239 |