FFCP PHASE1:Hg19::chr9:131873591..131873622,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5524 | |EntrezGene=5524 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9308 | |HGNC=9308 | ||
|TSSclassifier=strong | |||
|UniProt=Q15257,A6PVN5,Q68CR8 | |UniProt=Q15257,A6PVN5,Q68CR8 | ||
|association_with_transcript=0bp_to_ENST00000337738,ENST00000348141,ENST00000393370,NM_178000,NM_178001,NM_178003,uc004bxm.1,uc004bxn.1,uc004bxo.1,uc010myr.1,uc011mbo.1,uc011mbp.1_5end | |association_with_transcript=0bp_to_ENST00000337738,ENST00000348141,ENST00000393370,NM_178000,NM_178001,NM_178003,uc004bxm.1,uc004bxn.1,uc004bxo.1,uc010myr.1,uc011mbo.1,uc011mbp.1_5end | ||
|cluster_id=chr9:131873591..131873622,+ | |||
|description=CAGE_peak_2_at_PPP2R4_5end | |description=CAGE_peak_2_at_PPP2R4_5end | ||
|id=chr9:131873591..131873622,+ | |id=chr9:131873591..131873622,+ | ||
|ontology_enrichment_celltype=CL:0002321!4.57e-20!248;CL:0000220!2.12e-19!246;CL:0000066!1.66e-16!254;CL:0000222!8.08e-15!119;CL:0000183!7.67e-11!59;CL:0000393!2.39e-09!60;CL:0000211!2.39e-09!60;CL:0000055!2.79e-09!180;CL:0000187!4.94e-09!54;CL:0000076!5.42e-09!62;CL:0000680!8.63e-09!57;CL:0000056!8.63e-09!57;CL:0000355!8.63e-09!57;CL:0000192!8.64e-09!42;CL:0000514!8.64e-09!42;CL:1000449!8.88e-08!16;CL:1000497!3.30e-07!18;CL:0002518!3.30e-07!18;CL:0000548!3.74e-07!679;CL:0000004!3.74e-07!679;CL:0000255!3.74e-07!679;CL:1000507!8.74e-07!12;CL:1000494!8.74e-07!12 | |ontology_enrichment_celltype=CL:0002321!4.57e-20!248;CL:0000220!2.12e-19!246;CL:0000066!1.66e-16!254;CL:0000222!8.08e-15!119;CL:0000183!7.67e-11!59;CL:0000393!2.39e-09!60;CL:0000211!2.39e-09!60;CL:0000055!2.79e-09!180;CL:0000187!4.94e-09!54;CL:0000076!5.42e-09!62;CL:0000680!8.63e-09!57;CL:0000056!8.63e-09!57;CL:0000355!8.63e-09!57;CL:0000192!8.64e-09!42;CL:0000514!8.64e-09!42;CL:1000449!8.88e-08!16;CL:1000497!3.30e-07!18;CL:0002518!3.30e-07!18;CL:0000548!3.74e-07!679;CL:0000004!3.74e-07!679;CL:0000255!3.74e-07!679;CL:1000507!8.74e-07!12;CL:1000494!8.74e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:1000449;2.73e-08;15!CL:1000497;1.44e-07;17!CL:0002518;1.44e-07;17!CL:1000507;4.73e-07;10!CL:1000494;4.73e-07;10!CL:0002681;8.66e-07;12!CL:0002584;8.66e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.61e-20,250;CL:0000066,1.28e-16,253;CL:0000222,5.49e-15,121;CL:0000393,3.74e-09,61;CL:0000211,3.74e-09,61;CL:0000076,4.52e-09,63;CL:0000187,7.95e-09,55;CL:0000680,1.35e-08,58;CL:0000056,1.35e-08,58;CL:0000355,1.35e-08,58;CL:0000192,1.53e-08,43;CL:0000514,1.53e-08,43;CL:1000449,2.51e-08,15;CL:1000497,1.16e-07,17;CL:0002518,1.16e-07,17;CL:1000507,4.87e-07,10;CL:1000494,4.87e-07,10;CL:0002681,8.25e-07,12;CL:0002584,8.25e-07,12;CL:0000213,8.96e-07,58;CL:0000215,8.96e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!2.16e-22!312;UBERON:0000483!5.98e-22!309;UBERON:0000475!2.60e-14!365;UBERON:0000481!6.43e-14!347;UBERON:0000064!3.29e-13!219;UBERON:0000477!3.57e-13!286;UBERON:0000025!6.07e-12!194;UBERON:0004111!1.08e-10!241;UBERON:0000914!1.39e-10!83;UBERON:0002329!1.39e-10!83;UBERON:0003077!1.39e-10!83;UBERON:0003059!1.39e-10!83;UBERON:0007282!1.39e-10!83;UBERON:0009618!1.39e-10!83;UBERON:0007285!1.39e-10!83;UBERON:0000486!1.80e-10!82;UBERON:0005256!7.95e-10!143;UBERON:0004290!2.11e-09!70;UBERON:0000033!6.21e-08!123;UBERON:0002049!8.33e-08!79;UBERON:0007798!8.33e-08!79;UBERON:0004211!8.88e-08!16;UBERON:0001285!8.88e-08!16;UBERON:0007684!8.88e-08!16;UBERON:0003220!8.88e-08!16;UBERON:0004208!8.88e-08!16;UBERON:0000490!2.83e-07!138;UBERON:0003914!3.05e-07!118;UBERON:0003075!3.97e-07!86;UBERON:0007284!3.97e-07!86;UBERON:0001134!4.32e-07!61;UBERON:0002036!4.32e-07!61;UBERON:0003082!4.32e-07!61;UBERON:0004121!4.45e-07!169;UBERON:0000153!5.66e-07!129;UBERON:0007811!5.66e-07!129;UBERON:0001981!7.77e-07!60;UBERON:0007500!7.77e-07!60;UBERON:0004537!7.77e-07!60;UBERON:0006965!7.77e-07!60;UBERON:0006555!8.46e-07!17;UBERON:0005103!8.46e-07!17;UBERON:0000083!8.46e-07!17;UBERON:0009201!8.46e-07!17;UBERON:0004819!8.46e-07!17;UBERON:0006553!8.46e-07!17;UBERON:0003074!8.46e-07!17;UBERON:0003060!8.46e-07!17;UBERON:0002100!8.59e-07!216;UBERON:0009773!8.74e-07!12;UBERON:0001231!8.74e-07!12;UBERON:0004810!8.74e-07!12;UBERON:0000055!9.48e-07!69 | |ontology_enrichment_uberon=UBERON:0000119!2.16e-22!312;UBERON:0000483!5.98e-22!309;UBERON:0000475!2.60e-14!365;UBERON:0000481!6.43e-14!347;UBERON:0000064!3.29e-13!219;UBERON:0000477!3.57e-13!286;UBERON:0000025!6.07e-12!194;UBERON:0004111!1.08e-10!241;UBERON:0000914!1.39e-10!83;UBERON:0002329!1.39e-10!83;UBERON:0003077!1.39e-10!83;UBERON:0003059!1.39e-10!83;UBERON:0007282!1.39e-10!83;UBERON:0009618!1.39e-10!83;UBERON:0007285!1.39e-10!83;UBERON:0000486!1.80e-10!82;UBERON:0005256!7.95e-10!143;UBERON:0004290!2.11e-09!70;UBERON:0000033!6.21e-08!123;UBERON:0002049!8.33e-08!79;UBERON:0007798!8.33e-08!79;UBERON:0004211!8.88e-08!16;UBERON:0001285!8.88e-08!16;UBERON:0007684!8.88e-08!16;UBERON:0003220!8.88e-08!16;UBERON:0004208!8.88e-08!16;UBERON:0000490!2.83e-07!138;UBERON:0003914!3.05e-07!118;UBERON:0003075!3.97e-07!86;UBERON:0007284!3.97e-07!86;UBERON:0001134!4.32e-07!61;UBERON:0002036!4.32e-07!61;UBERON:0003082!4.32e-07!61;UBERON:0004121!4.45e-07!169;UBERON:0000153!5.66e-07!129;UBERON:0007811!5.66e-07!129;UBERON:0001981!7.77e-07!60;UBERON:0007500!7.77e-07!60;UBERON:0004537!7.77e-07!60;UBERON:0006965!7.77e-07!60;UBERON:0006555!8.46e-07!17;UBERON:0005103!8.46e-07!17;UBERON:0000083!8.46e-07!17;UBERON:0009201!8.46e-07!17;UBERON:0004819!8.46e-07!17;UBERON:0006553!8.46e-07!17;UBERON:0003074!8.46e-07!17;UBERON:0003060!8.46e-07!17;UBERON:0002100!8.59e-07!216;UBERON:0009773!8.74e-07!12;UBERON:0001231!8.74e-07!12;UBERON:0004810!8.74e-07!12;UBERON:0000055!9.48e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.73e-08;15!UBERON:0004819;2.73e-08;15!UBERON:0001285;2.73e-08;15!UBERON:0007684;2.73e-08;15!UBERON:0004211;4.73e-07;10!UBERON:0009773;4.73e-07;10!UBERON:0001231;4.73e-07;10!UBERON:0004810;4.73e-07;10!UBERON:0000353;6.75e-07;15!UBERON:0003914;7.98e-07;74!UBERON:0001225;8.66e-07;12!UBERON:0008987;8.66e-07;12 | |||
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| ||
|short_description=p2@PPP2R4 | |short_description=p2@PPP2R4 | ||
}} | }} |
Latest revision as of 21:54, 15 September 2015
Short description: | p2@PPP2R4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PPP2R4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000337738, ENST00000348141, ENST00000393370, NM_178000, NM_178001, NM_178003, uc004bxm.1, uc004bxn.1, uc004bxo.1, uc010myr.1, uc011mbo.1, uc011mbp.1_5end |
EntrezGene: | PPP2R4 |
HGNC: | 9308 |
UniProt: | Q15257A6PVN5Q68CR8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.61e-20 | 250 |
epithelial cell | 1.28e-16 | 253 |
mesodermal cell | 5.49e-15 | 121 |
electrically responsive cell | 3.74e-09 | 61 |
electrically active cell | 3.74e-09 | 61 |
squamous epithelial cell | 4.52e-09 | 63 |
muscle cell | 7.95e-09 | 55 |
muscle precursor cell | 1.35e-08 | 58 |
myoblast | 1.35e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.35e-08 | 58 |
smooth muscle cell | 1.53e-08 | 43 |
smooth muscle myoblast | 1.53e-08 | 43 |
epithelial cell of nephron | 2.51e-08 | 15 |
kidney cell | 1.16e-07 | 17 |
kidney epithelial cell | 1.16e-07 | 17 |
kidney tubule cell | 4.87e-07 | 10 |
nephron tubule epithelial cell | 4.87e-07 | 10 |
kidney cortical cell | 8.25e-07 | 12 |
renal cortical epithelial cell | 8.25e-07 | 12 |
lining cell | 8.96e-07 | 58 |
barrier cell | 8.96e-07 | 58 |