FFCP PHASE1:Hg19::chr19:13044513..13044543,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2193 | |EntrezGene=2193 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3592 | |HGNC=3592 | ||
|TSSclassifier=strong | |||
|UniProt=B4E363 | |UniProt=B4E363 | ||
|association_with_transcript=0bp_to_ENST00000423140_5end | |association_with_transcript=0bp_to_ENST00000423140_5end | ||
|cluster_id=chr19:13044513..13044543,- | |||
|coexpression_cluster_id=C2400 | |||
|description=CAGE_peak_1_at_FARSA_5end | |description=CAGE_peak_1_at_FARSA_5end | ||
|id=chr19:13044513..13044543,- | |id=chr19:13044513..13044543,- | ||
|ontology_enrichment_celltype=CL:0000548!1.42e-15!679;CL:0000004!1.42e-15!679;CL:0000255!1.42e-15!679;CL:0000012!2.99e-15!682;CL:0002321!7.65e-15!248;CL:0000220!2.41e-14!246;CL:0000066!1.85e-11!254;CL:0000222!1.38e-09!119;CL:0000144!9.73e-09!625;CL:0000055!3.80e-08!180;CL:0000183!1.44e-07!59;CL:0000003!1.68e-07!722;CL:0002371!4.96e-07!591 | |ontology_enrichment_celltype=CL:0000548!1.42e-15!679;CL:0000004!1.42e-15!679;CL:0000255!1.42e-15!679;CL:0000012!2.99e-15!682;CL:0002321!7.65e-15!248;CL:0000220!2.41e-14!246;CL:0000066!1.85e-11!254;CL:0000222!1.38e-09!119;CL:0000144!9.73e-09!625;CL:0000055!3.80e-08!180;CL:0000183!1.44e-07!59;CL:0000003!1.68e-07!722;CL:0002371!4.96e-07!591 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,6.51e-15,250;CL:0000066,1.49e-11,253;CL:0000222,1.30e-09,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!9.38e-20!51;DOID:0060083!9.38e-20!51;DOID:1240!2.35e-18!39;DOID:14566!1.05e-17!239;DOID:162!1.35e-17!235;DOID:8692!1.49e-16!31;DOID:0050686!9.45e-13!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.35e-16;31!DOID:1240;1.51e-14;39!DOID:2531;1.34e-12;51!DOID:0060083;1.34e-12;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,9.38e-20,51;DOID:0060083,9.38e-20,51;DOID:1240,2.35e-18,39;DOID:14566,1.05e-17,239;DOID:162,1.35e-17,235;DOID:8692,1.49e-16,31;DOID:0050686,9.45e-13,137 | |||
|ontology_enrichment_uberon=UBERON:0001637!1.25e-09!42;UBERON:0003509!1.25e-09!42;UBERON:0004572!1.25e-09!42;UBERON:0003914!1.25e-08!118;UBERON:0001981!4.02e-08!60;UBERON:0007500!4.02e-08!60;UBERON:0004537!4.02e-08!60;UBERON:0006965!4.02e-08!60;UBERON:0004872!4.23e-08!84;UBERON:0000055!8.99e-08!69;UBERON:0002049!4.15e-07!79;UBERON:0007798!4.15e-07!79;UBERON:0000119!8.51e-07!312 | |ontology_enrichment_uberon=UBERON:0001637!1.25e-09!42;UBERON:0003509!1.25e-09!42;UBERON:0004572!1.25e-09!42;UBERON:0003914!1.25e-08!118;UBERON:0001981!4.02e-08!60;UBERON:0007500!4.02e-08!60;UBERON:0004537!4.02e-08!60;UBERON:0006965!4.02e-08!60;UBERON:0004872!4.23e-08!84;UBERON:0000055!8.99e-08!69;UBERON:0002049!4.15e-07!79;UBERON:0007798!4.15e-07!79;UBERON:0000119!8.51e-07!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.40e-07;42!UBERON:0003509;2.40e-07;42!UBERON:0004572;2.40e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.25e-09,42;UBERON:0003509,1.25e-09,42;UBERON:0004572,1.25e-09,42;UBERON:0003914,9.22e-09,117;UBERON:0007500,1.91e-08,59;UBERON:0001981,1.91e-08,59;UBERON:0004537,1.91e-08,59;UBERON:0006965,1.91e-08,59;UBERON:0004872,2.34e-08,83;UBERON:0000055,4.67e-08,68;UBERON:0007503,5.45e-08,78;UBERON:0000490,1.66e-07,148;UBERON:0002049,2.37e-07,78;UBERON:0007798,2.37e-07,78;UBERON:0000119,7.67e-07,309 | |||
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| ||
|short_description=p1@FARSA | |short_description=p1@FARSA | ||
}} | }} |
Latest revision as of 21:58, 15 September 2015
Short description: | p1@FARSA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FARSA_5end |
Coexpression cluster: | C2400_Alveolar_embryonic_Mesenchymal_Renal_Smooth_acute_granulocyte |
Association with transcript: | 0bp_to_ENST00000423140_5end |
EntrezGene: | FARSA |
HGNC: | 3592 |
UniProt: | B4E363 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 6.51e-15 | 250 |
epithelial cell | 1.49e-11 | 253 |
mesodermal cell | 1.30e-09 | 121 |
Ontology term | p-value | n |
---|---|---|
artery | 1.25e-09 | 42 |
arterial blood vessel | 1.25e-09 | 42 |
arterial system | 1.25e-09 | 42 |
epithelial tube | 9.22e-09 | 117 |
epithelial tube open at both ends | 1.91e-08 | 59 |
blood vessel | 1.91e-08 | 59 |
blood vasculature | 1.91e-08 | 59 |
vascular cord | 1.91e-08 | 59 |
splanchnic layer of lateral plate mesoderm | 2.34e-08 | 83 |
vessel | 4.67e-08 | 68 |
epithelial vesicle | 5.45e-08 | 78 |
unilaminar epithelium | 1.66e-07 | 148 |
vasculature | 2.37e-07 | 78 |
vascular system | 2.37e-07 | 78 |
cell layer | 7.67e-07 | 309 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 9.38e-20 | 51 |
immune system cancer | 9.38e-20 | 51 |
leukemia | 2.35e-18 | 39 |
disease of cellular proliferation | 1.05e-17 | 239 |
cancer | 1.35e-17 | 235 |
myeloid leukemia | 1.49e-16 | 31 |
organ system cancer | 9.45e-13 | 137 |