FFCP PHASE1:Hg19::chr19:13051052..13051073,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=811 | |EntrezGene=811 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1455 | |HGNC=1455 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-81bp_to_AK130190_5end | |association_with_transcript=-81bp_to_AK130190_5end | ||
|cluster_id=chr19:13051052..13051073,+ | |||
|coexpression_cluster_id=C603 | |||
|description=CAGE_peak_12_at_CALR_5end | |description=CAGE_peak_12_at_CALR_5end | ||
|id=chr19:13051052..13051073,+ | |id=chr19:13051052..13051073,+ | ||
|ontology_enrichment_celltype=CL:0000548!1.72e-19!679;CL:0000004!1.72e-19!679;CL:0000255!1.72e-19!679;CL:0000012!2.05e-19!682;CL:0000144!7.50e-19!625;CL:0002371!2.06e-18!591;CL:0000055!5.18e-17!180;CL:0000220!2.62e-13!246;CL:0002321!3.42e-13!248;CL:0000222!1.41e-12!119;CL:0000183!1.11e-10!59;CL:0000680!1.72e-10!57;CL:0000056!1.72e-10!57;CL:0000355!1.72e-10!57;CL:0000393!1.76e-10!60;CL:0000211!1.76e-10!60;CL:0000723!3.38e-10!436;CL:0000034!3.96e-10!444;CL:0000003!4.04e-10!722;CL:0000048!5.51e-10!430;CL:0000187!6.89e-10!54;CL:0000192!1.83e-09!42;CL:0000514!1.83e-09!42;CL:0000359!1.84e-08!32;CL:0000057!7.10e-07!75;CL:0000063!8.65e-07!578 | |ontology_enrichment_celltype=CL:0000548!1.72e-19!679;CL:0000004!1.72e-19!679;CL:0000255!1.72e-19!679;CL:0000012!2.05e-19!682;CL:0000144!7.50e-19!625;CL:0002371!2.06e-18!591;CL:0000055!5.18e-17!180;CL:0000220!2.62e-13!246;CL:0002321!3.42e-13!248;CL:0000222!1.41e-12!119;CL:0000183!1.11e-10!59;CL:0000680!1.72e-10!57;CL:0000056!1.72e-10!57;CL:0000355!1.72e-10!57;CL:0000393!1.76e-10!60;CL:0000211!1.76e-10!60;CL:0000723!3.38e-10!436;CL:0000034!3.96e-10!444;CL:0000003!4.04e-10!722;CL:0000048!5.51e-10!430;CL:0000187!6.89e-10!54;CL:0000192!1.83e-09!42;CL:0000514!1.83e-09!42;CL:0000359!1.84e-08!32;CL:0000057!7.10e-07!75;CL:0000063!8.65e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.30e-08;32!CL:0000134;6.88e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.06e-13,250;CL:0000222,1.36e-12,121;CL:0000393,6.45e-10,61;CL:0000211,6.45e-10,61;CL:0000680,8.00e-10,58;CL:0000056,8.00e-10,58;CL:0000355,8.00e-10,58;CL:0000723,1.30e-09,433;CL:0000034,1.54e-09,441;CL:0000048,2.09e-09,427;CL:0000187,3.22e-09,55;CL:0000192,6.68e-09,43;CL:0000514,6.68e-09,43;CL:0000359,1.40e-08,32;CL:0000057,3.18e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!2.00e-12!118;UBERON:0005256!4.68e-12!143;UBERON:0002049!1.80e-11!79;UBERON:0007798!1.80e-11!79;UBERON:0001637!2.32e-11!42;UBERON:0003509!2.32e-11!42;UBERON:0004572!2.32e-11!42;UBERON:0000914!1.50e-10!83;UBERON:0002329!1.50e-10!83;UBERON:0003077!1.50e-10!83;UBERON:0003059!1.50e-10!83;UBERON:0007282!1.50e-10!83;UBERON:0009618!1.50e-10!83;UBERON:0007285!1.50e-10!83;UBERON:0004290!2.84e-10!70;UBERON:0000490!3.83e-10!138;UBERON:0000055!5.10e-10!69;UBERON:0001981!1.41e-09!60;UBERON:0007500!1.41e-09!60;UBERON:0004537!1.41e-09!60;UBERON:0006965!1.41e-09!60;UBERON:0000486!1.52e-09!82;UBERON:0004872!1.62e-09!84;UBERON:0004573!3.72e-09!33;UBERON:0004571!3.72e-09!33;UBERON:0001134!2.51e-08!61;UBERON:0002036!2.51e-08!61;UBERON:0003082!2.51e-08!61;UBERON:0002385!1.03e-07!63;UBERON:0001015!1.03e-07!63;UBERON:0000383!1.03e-07!63;UBERON:0004535!3.40e-07!110;UBERON:0001009!3.90e-07!113;UBERON:0000926!7.33e-07!448;UBERON:0004120!7.33e-07!448;UBERON:0006603!7.33e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;9.26e-09;42!UBERON:0003509;9.26e-09;42!UBERON:0004572;9.26e-09;42!UBERON:0004573;3.06e-08;33!UBERON:0004571;3.06e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.44e-12,117;UBERON:0001637,1.58e-11,42;UBERON:0003509,1.58e-11,42;UBERON:0004572,1.58e-11,42;UBERON:0005256,2.30e-11,122;UBERON:0007503,2.54e-11,78;UBERON:0000490,2.90e-11,148;UBERON:0002049,5.52e-11,78;UBERON:0007798,5.52e-11,78;UBERON:0003104,8.20e-10,160;UBERON:0009142,8.20e-10,160;UBERON:0002329,1.42e-09,71;UBERON:0003059,1.42e-09,71;UBERON:0007282,1.42e-09,71;UBERON:0004290,1.42e-09,71;UBERON:0009618,1.42e-09,71;UBERON:0000055,1.61e-09,68;UBERON:0007524,2.46e-09,73;UBERON:0004573,2.76e-09,33;UBERON:0004571,2.76e-09,33;UBERON:0007500,3.47e-09,59;UBERON:0001981,3.47e-09,59;UBERON:0004537,3.47e-09,59;UBERON:0006965,3.47e-09,59;UBERON:0003077,4.62e-09,72;UBERON:0007285,4.62e-09,72;UBERON:0004872,5.61e-09,83;UBERON:0000486,7.89e-09,83;UBERON:0001134,1.18e-07,62;UBERON:0002036,1.18e-07,62;UBERON:0003082,1.18e-07,62;UBERON:0004535,4.53e-07,109;UBERON:0002385,5.12e-07,64;UBERON:0001015,5.12e-07,64;UBERON:0000383,5.12e-07,64;UBERON:0001009,5.18e-07,112 | |||
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| ||
|short_description=p12@CALR | |short_description=p12@CALR | ||
}} | }} |
Latest revision as of 22:09, 15 September 2015
Short description: | p12@CALR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CALR_5end |
Coexpression cluster: | C603_Monocytederived_Hair_Aortic_Hepatocyte_Adipocyte_leiomyoma_mesenchymal |
Association with transcript: | -81bp_to_AK130190_5end |
EntrezGene: | CALR |
HGNC: | 1455 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.06e-13 | 250 |
mesodermal cell | 1.36e-12 | 121 |
electrically responsive cell | 6.45e-10 | 61 |
electrically active cell | 6.45e-10 | 61 |
muscle precursor cell | 8.00e-10 | 58 |
myoblast | 8.00e-10 | 58 |
multi-potent skeletal muscle stem cell | 8.00e-10 | 58 |
somatic stem cell | 1.30e-09 | 433 |
stem cell | 1.54e-09 | 441 |
multi fate stem cell | 2.09e-09 | 427 |
muscle cell | 3.22e-09 | 55 |
smooth muscle cell | 6.68e-09 | 43 |
smooth muscle myoblast | 6.68e-09 | 43 |
vascular associated smooth muscle cell | 1.40e-08 | 32 |
fibroblast | 3.18e-07 | 76 |