FFCP PHASE1:Hg19::chr1:110198714..110198756,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2948 | |EntrezGene=2948 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4636 | |HGNC=4636 | ||
|TSSclassifier=strong | |||
|UniProt=Q4JNT8 | |UniProt=Q4JNT8 | ||
|association_with_transcript=0bp_to_ENST00000326729,ENST00000336075,ENST00000461767,ENST00000464733,ENST00000479578_5end | |association_with_transcript=0bp_to_ENST00000326729,ENST00000336075,ENST00000461767,ENST00000464733,ENST00000479578_5end | ||
|cluster_id=chr1:110198714..110198756,+ | |||
|description=CAGE_peak_1_at_GSTM4_5end | |description=CAGE_peak_1_at_GSTM4_5end | ||
|id=chr1:110198714..110198756,+ | |id=chr1:110198714..110198756,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.53e-12!115;UBERON:0002346!2.57e-09!90;UBERON:0003075!2.99e-08!86;UBERON:0007284!2.99e-08!86;UBERON:0005743!3.29e-08!86;UBERON:0002616!3.38e-08!59;UBERON:0000955!3.74e-08!69;UBERON:0006238!3.74e-08!69;UBERON:0001049!7.73e-08!57;UBERON:0005068!7.73e-08!57;UBERON:0006241!7.73e-08!57;UBERON:0007135!7.73e-08!57;UBERON:0000073!1.26e-07!94;UBERON:0001016!1.26e-07!94;UBERON:0001017!2.10e-07!82;UBERON:0003056!9.78e-07!61 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.54e-12,114;UBERON:0002346,1.99e-09,86;UBERON:0000955,2.35e-08,68;UBERON:0006238,2.35e-08,68;UBERON:0003075,2.41e-08,82;UBERON:0007284,2.41e-08,82;UBERON:0011216,3.16e-08,223;UBERON:0000073,4.56e-08,53;UBERON:0002616,4.56e-08,53;UBERON:0001049,4.60e-08,56;UBERON:0005068,4.60e-08,56;UBERON:0006241,4.60e-08,56;UBERON:0007135,4.60e-08,56;UBERON:0001017,1.44e-07,81;UBERON:0001016,5.26e-07,89;UBERON:0003056,8.09e-07,61 | |||
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| ||
|short_description=p1@GSTM4 | |short_description=p1@GSTM4 | ||
}} | }} |
Latest revision as of 22:38, 15 September 2015
Short description: | p1@GSTM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GSTM4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000326729, ENST00000336075, ENST00000461767, ENST00000464733, ENST00000479578_5end |
EntrezGene: | GSTM4 |
HGNC: | 4636 |
UniProt: | Q4JNT8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 5.54e-12 | 114 |
neurectoderm | 1.99e-09 | 86 |
brain | 2.35e-08 | 68 |
future brain | 2.35e-08 | 68 |
neural plate | 2.41e-08 | 82 |
presumptive neural plate | 2.41e-08 | 82 |
organ system subdivision | 3.16e-08 | 223 |
regional part of nervous system | 4.56e-08 | 53 |
regional part of brain | 4.56e-08 | 53 |
neural tube | 4.60e-08 | 56 |
neural rod | 4.60e-08 | 56 |
future spinal cord | 4.60e-08 | 56 |
neural keel | 4.60e-08 | 56 |
central nervous system | 1.44e-07 | 81 |
nervous system | 5.26e-07 | 89 |
pre-chordal neural plate | 8.09e-07 | 61 |