FFCP PHASE1:Hg19::chr10:102890767..102890780,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3195 | |EntrezGene=3195 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5056 | |HGNC=5056 | ||
|TSSclassifier=strong | |||
|UniProt=G3V1B7 | |UniProt=G3V1B7 | ||
|association_with_transcript=253bp_to_ENST00000463716_5end | |association_with_transcript=253bp_to_ENST00000463716_5end | ||
|cluster_id=chr10:102890767..102890780,+ | |||
|coexpression_cluster_id=C178 | |||
|description=CAGE_peak_4_at_TLX1_5end | |description=CAGE_peak_4_at_TLX1_5end | ||
|id=chr10:102890767..102890780,+ | |id=chr10:102890767..102890780,+ | ||
|ontology_enrichment_celltype=CL:0002253!2.87e-08!2 | |ontology_enrichment_celltype=CL:0002253!2.87e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000047;6.30e-21;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.02e-23;7 | |||
|ontology_enrichment_disease=DOID:178!1.78e-15!1;DOID:326!1.78e-15!1;DOID:3978!1.78e-15!1;DOID:3394!1.78e-15!1;DOID:5844!1.78e-15!1;DOID:114!2.15e-08!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!2.05e-20!3;UBERON:0004854!2.05e-20!3;UBERON:0009034!2.05e-20!3;UBERON:0002095!2.05e-20!3;UBERON:0004782!2.05e-20!3;UBERON:0003281!2.05e-20!3;UBERON:0009664!2.05e-20!3;UBERON:0002296!2.05e-20!3;UBERON:0005602!2.05e-20!3;UBERON:0001179!2.05e-20!3;UBERON:0006293!2.05e-20!3;UBERON:0004177!4.10e-19!7;UBERON:0000945!7.03e-17!8;UBERON:0010039!7.03e-17!8;UBERON:0000997!3.66e-15!1;UBERON:0005056!3.66e-15!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.28e-53;3!UBERON:0004177;1.05e-32;5!UBERON:0005057;1.05e-32;5!UBERON:0002075;6.79e-10;18!UBERON:0001044;7.01e-08;6!UBERON:0003293;7.01e-08;6!UBERON:0003294;7.01e-08;6!UBERON:0010047;7.01e-08;6!UBERON:0003408;7.01e-08;6!UBERON:0000167;7.01e-08;6!UBERON:0000077;6.43e-07;27!UBERON:0002405;6.43e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.28e-53,3;UBERON:0004854,1.28e-53,3;UBERON:0009034,1.28e-53,3;UBERON:0002095,1.28e-53,3;UBERON:0004782,1.28e-53,3;UBERON:0003281,1.28e-53,3;UBERON:0009664,1.28e-53,3;UBERON:0002296,1.28e-53,3;UBERON:0005602,1.28e-53,3;UBERON:0001179,1.28e-53,3;UBERON:0006293,1.28e-53,3;UBERON:0004177,1.02e-23,7;UBERON:0005057,1.02e-23,7;UBERON:0000945,6.64e-21,8;UBERON:0010039,6.64e-21,8;UBERON:0004457,2.57e-14,12;UBERON:0000042,2.57e-14,12;UBERON:0003887,2.57e-14,12;UBERON:0002075,6.79e-10,18;UBERON:0001044,7.25e-08,6;UBERON:0003293,7.25e-08,6;UBERON:0003294,7.25e-08,6;UBERON:0010047,7.25e-08,6;UBERON:0000167,7.25e-08,6;UBERON:0005409,3.78e-07,25 | |||
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|short_description=p4@TLX1 | |short_description=p4@TLX1 | ||
}} | }} |
Latest revision as of 22:53, 15 September 2015
Short description: | p4@TLX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TLX1_5end |
Coexpression cluster: | C178_spleen_liver_Hepatocyte_b_lymph_vein_thymus |
Association with transcript: | 253bp_to_ENST00000463716_5end |
EntrezGene: | TLX1 |
HGNC: | 5056 |
UniProt: | G3V1B7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spleen | 1.28e-53 | 3 |
gastrointestinal system mesentery | 1.28e-53 | 3 |
stomach region | 1.28e-53 | 3 |
mesentery | 1.28e-53 | 3 |
gastrointestinal system serosa | 1.28e-53 | 3 |
mesentery of stomach | 1.28e-53 | 3 |
gut mesentery | 1.28e-53 | 3 |
dorsal mesentery | 1.28e-53 | 3 |
dorsal mesogastrium | 1.28e-53 | 3 |
peritoneal cavity | 1.28e-53 | 3 |
spleen primordium | 1.28e-53 | 3 |
hemopoietic organ | 1.02e-23 | 7 |
immune organ | 1.02e-23 | 7 |
stomach | 6.64e-21 | 8 |
food storage organ | 6.64e-21 | 8 |
cavity lining | 2.57e-14 | 12 |
serous membrane | 2.57e-14 | 12 |
intraembryonic coelom | 2.57e-14 | 12 |
viscus | 6.79e-10 | 18 |
saliva-secreting gland | 7.25e-08 | 6 |
gland of oral region | 7.25e-08 | 6 |
gland of foregut | 7.25e-08 | 6 |
oral gland | 7.25e-08 | 6 |
oral cavity | 7.25e-08 | 6 |
gastrointestinal system | 3.78e-07 | 25 |