FFCP PHASE1:Hg19::chr10:102891023..102891028,+: Difference between revisions
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|id=chr10:102891023..102891028,+
|short_description=p7@TLX1
|description=CAGE_peak_7_at_TLX1_5end
|association_with_transcript=-32bp_to_ENST00000467928,NM_001195517...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3195 | |EntrezGene=3195 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5056 | |HGNC=5056 | ||
|UniProt=A1L4G3, | |TSSclassifier=strong | ||
|UniProt=A1L4G3,P31314 | |||
|association_with_transcript=-32bp_to_ENST00000467928,NM_001195517,NM_005521,uc001ksw.2_5end | |||
|cluster_id=chr10:102891023..102891028,+ | |||
|coexpression_cluster_id=C253 | |||
|description=CAGE_peak_7_at_TLX1_5end | |||
|id=chr10:102891023..102891028,+ | |||
|ontology_enrichment_celltype=CL:0002253!2.38e-19!2;CL:0002563!3.79e-10!4;CL:0002336!3.96e-10!1;CL:0002261!3.96e-10!1;CL:0002170!3.96e-10!1;CL:0002251!4.54e-07!21 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.78e-29;7 | |||
|ontology_enrichment_disease=DOID:5409!3.79e-10!4;DOID:0050687!3.31e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!1.17e-13!3;UBERON:0004854!1.17e-13!3;UBERON:0009034!1.17e-13!3;UBERON:0002095!1.17e-13!3;UBERON:0004782!1.17e-13!3;UBERON:0003281!1.17e-13!3;UBERON:0009664!1.17e-13!3;UBERON:0002296!1.17e-13!3;UBERON:0005602!1.17e-13!3;UBERON:0001179!1.17e-13!3;UBERON:0006293!1.17e-13!3;UBERON:0000344!3.01e-12!12;UBERON:0001736!1.30e-10!1;UBERON:0006298!1.30e-10!1;UBERON:0001052!3.79e-10!4;UBERON:0001242!3.79e-10!4;UBERON:0001262!3.79e-10!4;UBERON:0004786!3.79e-10!4;UBERON:0004808!3.79e-10!4;UBERON:0001277!3.79e-10!4;UBERON:0002363!4.75e-10!1;UBERON:0007647!4.75e-10!1;UBERON:0010115!4.75e-10!1;UBERON:0003350!2.73e-08!5;UBERON:0004907!2.73e-08!5;UBERON:0003729!5.22e-08!5;UBERON:0001044!4.52e-07!6;UBERON:0003293!4.52e-07!6;UBERON:0003294!4.52e-07!6;UBERON:0010047!4.52e-07!6;UBERON:0000167!4.52e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.39e-66;3!UBERON:0004177;1.48e-40;5!UBERON:0005057;1.48e-40;5!UBERON:0002075;1.85e-12;18!UBERON:0000077;8.32e-09;27!UBERON:0002405;8.32e-09;27!UBERON:0002390;4.53e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.39e-66,3;UBERON:0004854,2.39e-66,3;UBERON:0009034,2.39e-66,3;UBERON:0002095,2.39e-66,3;UBERON:0004782,2.39e-66,3;UBERON:0003281,2.39e-66,3;UBERON:0009664,2.39e-66,3;UBERON:0002296,2.39e-66,3;UBERON:0005602,2.39e-66,3;UBERON:0001179,2.39e-66,3;UBERON:0006293,2.39e-66,3;UBERON:0004177,1.78e-29,7;UBERON:0005057,1.78e-29,7;UBERON:0000945,5.22e-26,8;UBERON:0010039,5.22e-26,8;UBERON:0004457,6.76e-18,12;UBERON:0000042,6.76e-18,12;UBERON:0003887,6.76e-18,12;UBERON:0002075,1.85e-12,18;UBERON:0005409,4.34e-09,25;UBERON:0000077,2.67e-08,29 | |||
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|short_description=p7@TLX1 | |||
}} | }} |
Latest revision as of 22:56, 15 September 2015
Short description: | p7@TLX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TLX1_5end |
Coexpression cluster: | C253_spleen_rhabdomyosarcoma_Hepatocyte_small_uterus_liver_rectum |
Association with transcript: | -32bp_to_ENST00000467928, NM_001195517, NM_005521, uc001ksw.2_5end |
EntrezGene: | TLX1 |
HGNC: | 5056 |
UniProt: | A1L4G3P31314 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spleen | 2.39e-66 | 3 |
gastrointestinal system mesentery | 2.39e-66 | 3 |
stomach region | 2.39e-66 | 3 |
mesentery | 2.39e-66 | 3 |
gastrointestinal system serosa | 2.39e-66 | 3 |
mesentery of stomach | 2.39e-66 | 3 |
gut mesentery | 2.39e-66 | 3 |
dorsal mesentery | 2.39e-66 | 3 |
dorsal mesogastrium | 2.39e-66 | 3 |
peritoneal cavity | 2.39e-66 | 3 |
spleen primordium | 2.39e-66 | 3 |
hemopoietic organ | 1.78e-29 | 7 |
immune organ | 1.78e-29 | 7 |
stomach | 5.22e-26 | 8 |
food storage organ | 5.22e-26 | 8 |
cavity lining | 6.76e-18 | 12 |
serous membrane | 6.76e-18 | 12 |
intraembryonic coelom | 6.76e-18 | 12 |
viscus | 1.85e-12 | 18 |
gastrointestinal system | 4.34e-09 | 25 |
mixed endoderm/mesoderm-derived structure | 2.67e-08 | 29 |