FFCP PHASE1:Hg19::chr2:234327537..234327560,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8527 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2851 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-326bp_to_ENST00000490764,uc010fyh.1_5end | |||
|cluster_id=chr2:234327537..234327560,+ | |||
|coexpression_cluster_id=C272 | |||
|description=CAGE_peak_6_at_DGKD_5end | |||
|id=chr2:234327537..234327560,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.41e-44!53;CL:0000051!1.41e-44!53;CL:0000838!3.65e-43!52;CL:0002087!4.67e-29!119;CL:0000791!4.37e-27!18;CL:0000789!4.37e-27!18;CL:0002420!4.37e-27!18;CL:0002419!4.37e-27!18;CL:0000790!4.37e-27!18;CL:0000738!2.58e-24!140;CL:0000945!4.82e-22!24;CL:0000826!4.82e-22!24;CL:0002031!4.99e-22!124;CL:0000625!2.68e-19!11;CL:0000084!5.97e-18!25;CL:0000827!5.97e-18!25;CL:0000236!1.20e-17!14;CL:0000037!1.36e-17!172;CL:0000566!1.36e-17!172;CL:0002032!4.21e-16!165;CL:0000837!4.21e-16!165;CL:0000988!9.64e-16!182;CL:0000624!2.48e-11!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.63e-42;18!CL:0000789;1.63e-42;18!CL:0002419;1.63e-42;18!CL:0000084;2.01e-29;25!CL:0000542;4.04e-29;53!CL:0000236;5.25e-29;13!CL:0000625;8.12e-28;11!CL:0000624;4.00e-19;6!CL:0000945;1.55e-14;24!CL:0002087;3.51e-10;104!CL:0000226;3.51e-10;3!CL:0000842;3.51e-10;3!CL:0000898;3.80e-10;3!CL:0000623;1.72e-09;3!CL:0000815;1.28e-07;2!CL:0000792;1.28e-07;2!CL:0002677;1.28e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,7.66e-51,53;CL:0000051,7.66e-51,53;CL:0000838,1.34e-48,52;CL:0000791,1.49e-42,18;CL:0000789,1.49e-42,18;CL:0002420,1.49e-42,18;CL:0002419,1.49e-42,18;CL:0000790,1.49e-42,18;CL:0000084,1.88e-29,25;CL:0000827,1.88e-29,25;CL:0000625,5.87e-28,11;CL:0000236,7.81e-27,14;CL:0002087,1.22e-26,115;CL:0000738,4.00e-21,136;CL:0000624,5.18e-19,6;CL:0002031,6.25e-19,120;CL:0000037,2.16e-15,168;CL:0000945,1.39e-14,24;CL:0000826,1.39e-14,24;CL:0000988,3.69e-14,177;CL:0002032,4.52e-13,161;CL:0000837,4.52e-13,161;CL:0000226,3.41e-10,3;CL:0000842,3.41e-10,3;CL:0000898,4.52e-10,3;CL:0000623,2.10e-09,3;CL:0000825,2.10e-09,3;CL:0000815,1.46e-07,2;CL:0000792,1.46e-07,2;CL:0002677,1.46e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;1.63e-42;18!CL:0000051;4.04e-29;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.31e-15!15;UBERON:0000179!2.31e-15!15;UBERON:0000463!2.31e-15!15;UBERON:0004177!2.23e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.76e-27;15!UBERON:0000179;2.76e-27;15!UBERON:0000463;2.76e-27;15!UBERON:0002390;7.28e-11;32!UBERON:0002193;2.69e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.45e-27,15;UBERON:0000179,3.45e-27,15;UBERON:0000463,3.45e-27,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0,0,0,0.154816123316076,0,0,0,0.232401601740905,0.284338464974843,0,1.66198622559563,0.802177789880567,0.217010870715852,0,1.29557466407592,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0.224723484445085,0,0.320929027076094,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,6.00752472388345,11.5636203002262,7.25441378363062,9.20910770182829,7.47178171940828,7.27149360063348,7.63243003628291,4.55370375287559,1.76171156811282,3.82273228125229,0,1.12101712596307,0,8.45852011489482,3.14408610199332,3.49522548299166,2.67498392625085,8.47397893247335,13.2565385605725,3.89653456815823,1.89397776704795,2.3568472597987,2.87994062958707,2.43723477388514,3.0741916734162,1.1705341280389,0,0.552700035571697,0.579606171470105,7.8591878475892,14.7147455449342,9.40819714244791,2.83273356743915,1.53288197440768,3.09264700934367,2.78321661221453,1.91139248594458,5.20866763085135,3.8018081777935,4.81840381048873,5.37543766848557,3.74792179657038,5.6826540490564,4.10563998460523,2.41928091869679,0.802320587350522,3.47578569318718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75843064282698,1.50939302401662,1.28343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.37596867919507,3.01999881146064,1.81436848265855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,2.53723804616085,2.29391162142713,1.13929437434833,5.00286728461357,3.70226045777575,1.94541993357815,1.62009431171434,3.17250070517708,0,0,0,1.67222857613147,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93398740871803,0,0,0,0,0.0898683511473268,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0.174118413160805,0,0.171986032471617,0.0967563312890851,0,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48849806543585,1.7785046870815,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346576998451015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0.354581522651905,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0.375935671919414,0.837952543656503,0.0999411559249289,0,0,0,2.92134555298607,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193766729508018,0.0620747142958579,0,0,0,0.217716747896961,0,0.875576689189638,0.0717222053926763,0,0,0.106727345877715,0,0.179650404213174,0,0,0,0,1.00636896795513,0.961705476909699 | |||
|short_description=p6@DGKD | |||
}} |
Latest revision as of 23:06, 15 September 2015
Short description: | p6@DGKD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_DGKD_5end |
Coexpression cluster: | C272_CD19_CD4_CD8_Whole_Peripheral_lymph_tonsil |
Association with transcript: | -326bp_to_ENST00000490764, uc010fyh.1_5end |
EntrezGene: | DGKD |
HGNC: | 2851 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 7.66e-51 | 53 |
common lymphoid progenitor | 7.66e-51 | 53 |
lymphoid lineage restricted progenitor cell | 1.34e-48 | 52 |
mature alpha-beta T cell | 1.49e-42 | 18 |
alpha-beta T cell | 1.49e-42 | 18 |
immature T cell | 1.49e-42 | 18 |
mature T cell | 1.49e-42 | 18 |
immature alpha-beta T cell | 1.49e-42 | 18 |
T cell | 1.88e-29 | 25 |
pro-T cell | 1.88e-29 | 25 |
CD8-positive, alpha-beta T cell | 5.87e-28 | 11 |
B cell | 7.81e-27 | 14 |
nongranular leukocyte | 1.22e-26 | 115 |
leukocyte | 4.00e-21 | 136 |
CD4-positive, alpha-beta T cell | 5.18e-19 | 6 |
hematopoietic lineage restricted progenitor cell | 6.25e-19 | 120 |
hematopoietic stem cell | 2.16e-15 | 168 |
lymphocyte of B lineage | 1.39e-14 | 24 |
pro-B cell | 1.39e-14 | 24 |
hematopoietic cell | 3.69e-14 | 177 |
hematopoietic oligopotent progenitor cell | 4.52e-13 | 161 |
hematopoietic multipotent progenitor cell | 4.52e-13 | 161 |
single nucleate cell | 3.41e-10 | 3 |
mononuclear cell | 3.41e-10 | 3 |
naive T cell | 4.52e-10 | 3 |
natural killer cell | 2.10e-09 | 3 |
pro-NK cell | 2.10e-09 | 3 |
regulatory T cell | 1.46e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.46e-07 | 2 |
naive regulatory T cell | 1.46e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 3.45e-27 | 15 |
haemolymphatic fluid | 3.45e-27 | 15 |
organism substance | 3.45e-27 | 15 |