FFCP PHASE1:Hg19::chr1:110453462..110453478,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:110453462..110453478,+ to FFCP PHASE1:Hg19::chr1:110453462..110453478,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1435 | |EntrezGene=1435 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2432 | |HGNC=2432 | ||
|TSSclassifier=strong | |||
|UniProt=E9PJA2 | |UniProt=E9PJA2 | ||
|association_with_transcript=-13bp_to_ENST00000488198_5end | |||
|cluster_id=chr1:110453462..110453478,+ | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_1_at_CSF1_5end | |||
|id=chr1:110453462..110453478,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.72e-13!180;CL:0000057!2.05e-10!75;CL:0000136!5.97e-08!15;CL:0000499!4.37e-07!27;CL:0000222!9.10e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000136;9.23e-08;13!CL:0000499;8.75e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.74e-10,76;CL:0000136,5.02e-08,15;CL:0000048,2.60e-07,427;CL:0000680,9.32e-07,58;CL:0000056,9.32e-07,58;CL:0000355,9.32e-07,58;CL:0000499,1.00e-06,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!7.98e-10!365;UBERON:0000468!5.02e-08!659;UBERON:0000467!5.27e-08!625;UBERON:0000480!9.44e-08!626;UBERON:0005256!3.24e-07!143;UBERON:0004290!4.28e-07!70;UBERON:0002385!6.81e-07!63;UBERON:0001015!6.81e-07!63;UBERON:0000383!6.81e-07!63 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.06e-08,160;UBERON:0009142,1.06e-08,160;UBERON:0005256,8.63e-08,122;UBERON:0002329,2.74e-07,71;UBERON:0003059,2.74e-07,71;UBERON:0007282,2.74e-07,71;UBERON:0004290,2.74e-07,71;UBERON:0009618,2.74e-07,71;UBERON:0007524,2.78e-07,73;UBERON:0003077,3.01e-07,72;UBERON:0007285,3.01e-07,72;UBERON:0007503,3.35e-07,78;UBERON:0002385,4.38e-07,64;UBERON:0001015,4.38e-07,64;UBERON:0000383,4.38e-07,64;UBERON:0001134,7.29e-07,62;UBERON:0002036,7.29e-07,62;UBERON:0003082,7.29e-07,62 | |||
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| ||
|short_description=p1@CSF1 | |||
}} | }} |
Latest revision as of 23:13, 15 September 2015
Short description: | p1@CSF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CSF1_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | -13bp_to_ENST00000488198_5end |
EntrezGene: | CSF1 |
HGNC: | 2432 |
UniProt: | E9PJA2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.74e-10 | 76 |
fat cell | 5.02e-08 | 15 |
multi fate stem cell | 2.60e-07 | 427 |
muscle precursor cell | 9.32e-07 | 58 |
myoblast | 9.32e-07 | 58 |
multi-potent skeletal muscle stem cell | 9.32e-07 | 58 |
stromal cell | 1.00e-06 | 28 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 1.06e-08 | 160 |
entire embryonic mesenchyme | 1.06e-08 | 160 |
trunk mesenchyme | 8.63e-08 | 122 |
somite | 2.74e-07 | 71 |
presomitic mesoderm | 2.74e-07 | 71 |
presumptive segmental plate | 2.74e-07 | 71 |
dermomyotome | 2.74e-07 | 71 |
trunk paraxial mesoderm | 2.74e-07 | 71 |
dense mesenchyme tissue | 2.78e-07 | 73 |
paraxial mesoderm | 3.01e-07 | 72 |
presumptive paraxial mesoderm | 3.01e-07 | 72 |
epithelial vesicle | 3.35e-07 | 78 |
muscle tissue | 4.38e-07 | 64 |
musculature | 4.38e-07 | 64 |
musculature of body | 4.38e-07 | 64 |
skeletal muscle tissue | 7.29e-07 | 62 |
striated muscle tissue | 7.29e-07 | 62 |
myotome | 7.29e-07 | 62 |